RNA–Protein interactions for RNA: ENST00000503002.5

RPS3A-202, Transcript of ribosomal protein S3A, humanhuman

TSL 3

Gene RPS3A, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-202ENST00000503002 TRPM2O94759 1503 aa21.29■■□□□ 1
RPS3A-202ENST00000503002 DIP2AQ14689 1571 aa21.28■■□□□ 1
RPS3A-202ENST00000503002 CHD2O14647 1828 aaKnown RBP21.27■■□□□ 1
RPS3A-202ENST00000503002 CLTCL1P53675 1640 aa21.26■□□□□ 0.99
RPS3A-202ENST00000503002 NRXN3Q9Y4C0 1643 aa21.26■□□□□ 0.99
RPS3A-202ENST00000503002 ITGAEP38570 1179 aa21.26■□□□□ 0.99
RPS3A-202ENST00000503002 ADAMTS13Q76LX8 1427 aa21.25■□□□□ 0.99
RPS3A-202ENST00000503002 STAG3Q9UJ98 1225 aa21.24■□□□□ 0.99
RPS3A-202ENST00000503002 SETBP1Q9Y6X0 1596 aa21.22■□□□□ 0.99
RPS3A-202ENST00000503002 TOM1O60784 492 aa21.2■□□□□ 0.98
RPS3A-202ENST00000503002 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
RPS3A-202ENST00000503002 KCNA6P17658 529 aa21.19■□□□□ 0.98
RPS3A-202ENST00000503002 TMEM94Q12767 1356 aa21.17■□□□□ 0.98
RPS3A-202ENST00000503002 XRN1Q8IZH2 1706 aaKnown RBP21.17■□□□□ 0.98
RPS3A-202ENST00000503002 SLC26A8Q96RN1 970 aa21.16■□□□□ 0.98
RPS3A-202ENST00000503002 PIK3R4Q99570 1358 aa21.15■□□□□ 0.98
RPS3A-202ENST00000503002 MED1Q15648 1581 aaPredicted RBP21.14■□□□□ 0.98
RPS3A-202ENST00000503002 HSPA1LP34931 641 aa21.14■□□□□ 0.97
RPS3A-202ENST00000503002 KIF1BO60333 1816 aa21.13■□□□□ 0.97
RPS3A-202ENST00000503002 SETD1AO15047 1707 aaKnown RBP21.13■□□□□ 0.97
RPS3A-202ENST00000503002 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.13■□□□□ 0.97
RPS3A-202ENST00000503002 TBX22Q9Y458 520 aa21.12■□□□□ 0.97
RPS3A-202ENST00000503002 NCOA3Q9Y6Q9 1424 aa21.11■□□□□ 0.97
RPS3A-202ENST00000503002 PIP4K2BP78356 416 aa21.1■□□□□ 0.97
RPS3A-202ENST00000503002 FAM135BQ49AJ0 1406 aa21.1■□□□□ 0.97
RPS3A-202ENST00000503002 PTPRUQ92729 1446 aa21.1■□□□□ 0.97
RPS3A-202ENST00000503002 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
RPS3A-202ENST00000503002 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
RPS3A-202ENST00000503002 HDGFP51858 240 aaKnown RBP21.08■□□□□ 0.97
RPS3A-202ENST00000503002 PPLO60437 1756 aa21.07■□□□□ 0.96
RPS3A-202ENST00000503002 PPP1R15AO75807 674 aaPredicted RBP21.06■□□□□ 0.96
RPS3A-202ENST00000503002 PRAG1Q86YV5 1406 aa21.05■□□□□ 0.96
RPS3A-202ENST00000503002 CHGAP10645 457 aaKnown RBP21.04■□□□□ 0.96
RPS3A-202ENST00000503002 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.04■□□□□ 0.96
RPS3A-202ENST00000503002 IFT172Q9UG01 1749 aa21.04■□□□□ 0.96
RPS3A-202ENST00000503002 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
RPS3A-202ENST00000503002 ILDR2Q71H61 639 aa21.02■□□□□ 0.96
RPS3A-202ENST00000503002 NUTM2DQ5VT03 806 aaPredicted RBP21.01■□□□□ 0.95
RPS3A-202ENST00000503002 PROSER2Q86WR7 435 aaPredicted RBP21.01■□□□□ 0.95
RPS3A-202ENST00000503002 MSH6P52701 1360 aa21■□□□□ 0.95
RPS3A-202ENST00000503002 DCCP43146 1447 aa20.99■□□□□ 0.95
RPS3A-202ENST00000503002 SPATA31E1Q6ZUB1 1445 aa20.99■□□□□ 0.95
RPS3A-202ENST00000503002 METP08581 1390 aa20.98■□□□□ 0.95
RPS3A-202ENST00000503002 RBM33Q96EV2 1170 aaKnown RBP20.98■□□□□ 0.95
RPS3A-202ENST00000503002 COL16A1Q07092 1604 aaPredicted RBP20.97■□□□□ 0.95
RPS3A-202ENST00000503002 NALCNQ8IZF0 1738 aa20.96■□□□□ 0.95
RPS3A-202ENST00000503002 SLC4A1APQ9BWU0 796 aaKnown RBP20.96■□□□□ 0.95
RPS3A-202ENST00000503002 AHDC1Q5TGY3 1603 aaPredicted RBP20.96■□□□□ 0.95
RPS3A-202ENST00000503002 PTCH1Q13635 1447 aa20.95■□□□□ 0.95
RPS3A-202ENST00000503002 BCANQ96GW7 911 aa20.95■□□□□ 0.94
RPS3A-202ENST00000503002 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
RPS3A-202ENST00000503002 TRIM52Q96A61 297 aa20.93■□□□□ 0.94
RPS3A-202ENST00000503002 SETD5Q9C0A6 1442 aa20.93■□□□□ 0.94
RPS3A-202ENST00000503002 PHLPP1O60346 1717 aa20.92■□□□□ 0.94
RPS3A-202ENST00000503002 RPGRIP1LQ68CZ1 1315 aa20.92■□□□□ 0.94
RPS3A-202ENST00000503002 ADGRL3Q9HAR2 1447 aa20.91■□□□□ 0.94
RPS3A-202ENST00000503002 AMOTL2Q9Y2J4 779 aa20.91■□□□□ 0.94
RPS3A-202ENST00000503002 ASXL1Q8IXJ9 1541 aa20.9■□□□□ 0.94
RPS3A-202ENST00000503002 CCDC144AA2RUR9 1427 aa20.9■□□□□ 0.94
RPS3A-202ENST00000503002 ZNF326Q5BKZ1 582 aaKnown RBP20.9■□□□□ 0.94
RPS3A-202ENST00000503002 MST1RQ04912 1400 aa20.88■□□□□ 0.93
RPS3A-202ENST00000503002 FOXD1Q16676 465 aa20.88■□□□□ 0.93
RPS3A-202ENST00000503002 MPHOSPH9Q99550 1183 aa20.88■□□□□ 0.93
RPS3A-202ENST00000503002 SLAIN2Q9P270 581 aa20.88■□□□□ 0.93
RPS3A-202ENST00000503002 NHSL1Q5SYE7 1610 aa20.88■□□□□ 0.93
RPS3A-202ENST00000503002 ACIN1Q9UKV3 1341 aaKnown RBP20.87■□□□□ 0.93
RPS3A-202ENST00000503002 LAMC1P11047 1609 aa20.87■□□□□ 0.93
RPS3A-202ENST00000503002 C19orf44Q9H6X5 657 aa20.87■□□□□ 0.93
RPS3A-202ENST00000503002 NRXN1Q9ULB1 1477 aa20.87■□□□□ 0.93
RPS3A-202ENST00000503002 KNDC1Q76NI1 1749 aa20.87■□□□□ 0.93
RPS3A-202ENST00000503002 RAB3GAP2Q9H2M9 1393 aa20.86■□□□□ 0.93
RPS3A-202ENST00000503002 SHPRHQ149N8 1683 aa20.86■□□□□ 0.93
RPS3A-202ENST00000503002 TECPR2O15040 1411 aa20.85■□□□□ 0.93
RPS3A-202ENST00000503002 PIK3C2GO75747 1445 aa20.85■□□□□ 0.93
RPS3A-202ENST00000503002 CADPS2Q86UW7 1296 aa20.84■□□□□ 0.93
RPS3A-202ENST00000503002 SOCS7O14512 581 aa20.83■□□□□ 0.93
RPS3A-202ENST00000503002 VGFO15240 615 aaPredicted RBP20.83■□□□□ 0.93
RPS3A-202ENST00000503002 ROBO2Q9HCK4 1378 aa20.83■□□□□ 0.92
RPS3A-202ENST00000503002 MYOM2P54296 1465 aa20.82■□□□□ 0.92
RPS3A-202ENST00000503002 ANKRD30BQ9BXX2 1392 aa20.82■□□□□ 0.92
RPS3A-202ENST00000503002 CDC42BPGQ6DT37 1551 aa20.8■□□□□ 0.92
RPS3A-202ENST00000503002 ADGRF5Q8IZF2 1346 aa20.78■□□□□ 0.92
RPS3A-202ENST00000503002 JCADQ9P266 1359 aa20.78■□□□□ 0.92
RPS3A-202ENST00000503002 LRP6O75581 1613 aa20.78■□□□□ 0.92
RPS3A-202ENST00000503002 BRINP3Q76B58 766 aa20.77■□□□□ 0.92
RPS3A-202ENST00000503002 RGS17Q9UGC6 210 aaPredicted RBP20.77■□□□□ 0.92
RPS3A-202ENST00000503002 ATF3P18847 181 aa20.75■□□□□ 0.91
RPS3A-202ENST00000503002 C1orf167Q5SNV9 1468 aa20.75■□□□□ 0.91
RPS3A-202ENST00000503002 HRCP23327 699 aa20.73■□□□□ 0.91
RPS3A-202ENST00000503002 C14orf37Q86TY3 774 aa20.73■□□□□ 0.91
RPS3A-202ENST00000503002 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
RPS3A-202ENST00000503002 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
RPS3A-202ENST00000503002 ABCC11Q96J66 1382 aa20.7■□□□□ 0.9
RPS3A-202ENST00000503002 SPATA31A6Q5VVP1 1343 aa20.68■□□□□ 0.9
RPS3A-202ENST00000503002 FMN2Q9NZ56 1722 aa20.67■□□□□ 0.9
RPS3A-202ENST00000503002 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
RPS3A-202ENST00000503002 YTHDC2Q9H6S0 1430 aaKnown RBP20.67■□□□□ 0.9
RPS3A-202ENST00000503002 DLC1Q96QB1 1528 aa20.66■□□□□ 0.9
RPS3A-202ENST00000503002 RGL3Q3MIN7 710 aa20.65■□□□□ 0.9
RPS3A-202ENST00000503002 COL22A1Q8NFW1 1626 aaPredicted RBP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms