RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 ZNF326Q5BKZ1 582 aaKnown RBP10.78□□□□□ -0.68
USP46-203ENST00000502443 NUTM2DQ5VT03 806 aaPredicted RBP10.78□□□□□ -0.68
USP46-203ENST00000502443 BCANQ96GW7 911 aa10.78□□□□□ -0.68
USP46-203ENST00000502443 KIF1BO60333 1816 aa10.78□□□□□ -0.68
USP46-203ENST00000502443 ZNF335Q9H4Z2 1342 aaPredicted RBP10.78□□□□□ -0.68
USP46-203ENST00000502443 ZFYVE9O95405 1425 aa10.77□□□□□ -0.68
USP46-203ENST00000502443 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP46-203ENST00000502443 SENP3Q9H4L4 574 aaPredicted RBP10.77□□□□□ -0.69
USP46-203ENST00000502443 CERKQ8TCT0 537 aa10.76□□□□□ -0.69
USP46-203ENST00000502443 CCDC144AA2RUR9 1427 aa10.75□□□□□ -0.69
USP46-203ENST00000502443 SLC26A8Q96RN1 970 aa10.75□□□□□ -0.69
USP46-203ENST00000502443 LTBP4Q8N2S1 1624 aa10.75□□□□□ -0.69
USP46-203ENST00000502443 PLEKHG1Q9ULL1 1385 aa10.73□□□□□ -0.69
USP46-203ENST00000502443 RGL3Q3MIN7 710 aa10.72□□□□□ -0.69
USP46-203ENST00000502443 NEXMIFQ5QGS0 1516 aa10.71□□□□□ -0.69
USP46-203ENST00000502443 ANKRD30BQ9BXX2 1392 aa10.71□□□□□ -0.69
USP46-203ENST00000502443 STRCP1A6NGW2 1772 aa10.7□□□□□ -0.7
USP46-203ENST00000502443 CPS1P31327 1500 aa10.7□□□□□ -0.7
USP46-203ENST00000502443 RPGRIP1LQ68CZ1 1315 aa10.7□□□□□ -0.7
USP46-203ENST00000502443 VGFO15240 615 aaPredicted RBP10.7□□□□□ -0.7
USP46-203ENST00000502443 SPATA31E1Q6ZUB1 1445 aa10.69□□□□□ -0.7
USP46-203ENST00000502443 TBX22Q9Y458 520 aa10.69□□□□□ -0.7
USP46-203ENST00000502443 PPLO60437 1756 aa10.69□□□□□ -0.7
USP46-203ENST00000502443 ADAMTS13Q76LX8 1427 aa10.68□□□□□ -0.7
USP46-203ENST00000502443 KCNA6P17658 529 aa10.68□□□□□ -0.7
USP46-203ENST00000502443 FBXO41Q8TF61 875 aa10.68□□□□□ -0.7
USP46-203ENST00000502443 ILDR1Q86SU0 546 aaPredicted RBP10.67□□□□□ -0.7
USP46-203ENST00000502443 IQSEC2Q5JU85 1478 aa10.67□□□□□ -0.7
USP46-203ENST00000502443 NRXN3Q9Y4C0 1643 aa10.66□□□□□ -0.7
USP46-203ENST00000502443 DIP2AQ14689 1571 aa10.66□□□□□ -0.7
USP46-203ENST00000502443 SETBP1Q9Y6X0 1596 aa10.66□□□□□ -0.7
USP46-203ENST00000502443 CHD2O14647 1828 aaKnown RBP10.65□□□□□ -0.7
USP46-203ENST00000502443 LRRC7Q96NW7 1537 aa10.65□□□□□ -0.7
USP46-203ENST00000502443 PROSER2Q86WR7 435 aaPredicted RBP10.65□□□□□ -0.7
USP46-203ENST00000502443 IFT172Q9UG01 1749 aa10.64□□□□□ -0.71
USP46-203ENST00000502443 ADGRF5Q8IZF2 1346 aa10.64□□□□□ -0.71
USP46-203ENST00000502443 RBM33Q96EV2 1170 aaKnown RBP10.64□□□□□ -0.71
USP46-203ENST00000502443 PCGF6Q9BYE7 350 aa10.64□□□□□ -0.71
USP46-203ENST00000502443 NWD1Q149M9 1564 aa10.64□□□□□ -0.71
USP46-203ENST00000502443 METP08581 1390 aa10.64□□□□□ -0.71
USP46-203ENST00000502443 PIK3R4Q99570 1358 aa10.64□□□□□ -0.71
USP46-203ENST00000502443 UBAP1LF5GYI3 381 aa10.63□□□□□ -0.71
USP46-203ENST00000502443 AMOTL2Q9Y2J4 779 aa10.63□□□□□ -0.71
USP46-203ENST00000502443 DHX57Q6P158 1386 aaKnown RBP10.63□□□□□ -0.71
USP46-203ENST00000502443 ALKQ9UM73 1620 aa10.62□□□□□ -0.71
USP46-203ENST00000502443 NKTRP30414 1462 aaKnown RBP10.62□□□□□ -0.71
USP46-203ENST00000502443 DCAF11Q8TEB1 546 aa10.62□□□□□ -0.71
USP46-203ENST00000502443 KDM2AQ9Y2K7 1162 aa10.62□□□□□ -0.71
USP46-203ENST00000502443 XIRP1Q702N8 1843 aaKnown RBP10.62□□□□□ -0.71
USP46-203ENST00000502443 TMEM94Q12767 1356 aa10.62□□□□□ -0.71
USP46-203ENST00000502443 PTPRUQ92729 1446 aa10.61□□□□□ -0.71
USP46-203ENST00000502443 TOM1O60784 492 aa10.61□□□□□ -0.71
USP46-203ENST00000502443 C14orf37Q86TY3 774 aa10.6□□□□□ -0.71
USP46-203ENST00000502443 SIN3AQ96ST3 1273 aa10.6□□□□□ -0.71
USP46-203ENST00000502443 SETD1AO15047 1707 aaKnown RBP10.6□□□□□ -0.71
USP46-203ENST00000502443 MYOM2P54296 1465 aa10.6□□□□□ -0.71
USP46-203ENST00000502443 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
USP46-203ENST00000502443 PIK3C2GO75747 1445 aa10.59□□□□□ -0.71
USP46-203ENST00000502443 PIP4K2BP78356 416 aa10.59□□□□□ -0.71
USP46-203ENST00000502443 NEUROD1Q13562 356 aa10.59□□□□□ -0.71
USP46-203ENST00000502443 XRN1Q8IZH2 1706 aaKnown RBP10.58□□□□□ -0.72
USP46-203ENST00000502443 NRXN1Q9ULB1 1477 aa10.58□□□□□ -0.72
USP46-203ENST00000502443 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
USP46-203ENST00000502443 MSH6P52701 1360 aa10.57□□□□□ -0.72
USP46-203ENST00000502443 CFAP70Q5T0N1 1121 aa10.57□□□□□ -0.72
USP46-203ENST00000502443 TMEM132EQ6IEE7 984 aa10.57□□□□□ -0.72
USP46-203ENST00000502443 C14orf93Q9H972 538 aaKnown RBP10.57□□□□□ -0.72
USP46-203ENST00000502443 STK26Q9P289 416 aa10.56□□□□□ -0.72
USP46-203ENST00000502443 NCOA3Q9Y6Q9 1424 aa10.56□□□□□ -0.72
USP46-203ENST00000502443 LAMC1P11047 1609 aa10.55□□□□□ -0.72
USP46-203ENST00000502443 C19orf44Q9H6X5 657 aa10.55□□□□□ -0.72
USP46-203ENST00000502443 ROBO2Q9HCK4 1378 aa10.54□□□□□ -0.72
USP46-203ENST00000502443 ATF3P18847 181 aa10.54□□□□□ -0.72
USP46-203ENST00000502443 L3MBTL2Q969R5 705 aa10.54□□□□□ -0.72
USP46-203ENST00000502443 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
USP46-203ENST00000502443 LRPPRCP42704 1394 aaKnown RBP10.53□□□□□ -0.72
USP46-203ENST00000502443 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.53□□□□□ -0.72
USP46-203ENST00000502443 PTCH1Q13635 1447 aa10.53□□□□□ -0.72
USP46-203ENST00000502443 YTHDC2Q9H6S0 1430 aaKnown RBP10.53□□□□□ -0.72
USP46-203ENST00000502443 ABCC11Q96J66 1382 aa10.52□□□□□ -0.72
USP46-203ENST00000502443 PRAG1Q86YV5 1406 aa10.52□□□□□ -0.73
USP46-203ENST00000502443 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
USP46-203ENST00000502443 SLAIN2Q9P270 581 aa10.52□□□□□ -0.73
USP46-203ENST00000502443 TECPR2O15040 1411 aa10.51□□□□□ -0.73
USP46-203ENST00000502443 WAPLQ7Z5K2 1190 aa10.51□□□□□ -0.73
USP46-203ENST00000502443 ADGRL3Q9HAR2 1447 aa10.5□□□□□ -0.73
USP46-203ENST00000502443 KNDC1Q76NI1 1749 aa10.5□□□□□ -0.73
USP46-203ENST00000502443 NALCNQ8IZF0 1738 aa10.5□□□□□ -0.73
USP46-203ENST00000502443 TRAK1Q9UPV9 953 aa10.5□□□□□ -0.73
USP46-203ENST00000502443 ADGRB1O14514 1584 aa10.5□□□□□ -0.73
USP46-203ENST00000502443 TONSLQ96HA7 1378 aa10.5□□□□□ -0.73
USP46-203ENST00000502443 DCCP43146 1447 aa10.5□□□□□ -0.73
USP46-203ENST00000502443 HSPA1LP34931 641 aa10.49□□□□□ -0.73
USP46-203ENST00000502443 PLEKHH1Q9ULM0 1364 aa10.49□□□□□ -0.73
USP46-203ENST00000502443 FAM135BQ49AJ0 1406 aa10.49□□□□□ -0.73
USP46-203ENST00000502443 ROBO1Q9Y6N7 1651 aa10.48□□□□□ -0.73
USP46-203ENST00000502443 KIAA1210Q9ULL0 1709 aa10.48□□□□□ -0.73
USP46-203ENST00000502443 SAFB2Q14151 953 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP46-203ENST00000502443 NBPF1Q3BBV0 1214 aa10.48□□□□□ -0.73
USP46-203ENST00000502443 SIRT1Q96EB6 747 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms