RNA–Protein interactions for RNA: ENST00000499045.2

CHFR-206, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 505 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-206ENST00000499045 FBXO41Q8TF61 875 aa37.65■■■■□ 3.62
CHFR-206ENST00000499045 IQSEC2Q5JU85 1478 aa37.61■■■■□ 3.61
CHFR-206ENST00000499045 HDGFP51858 240 aaKnown RBP37.59■■■■□ 3.61
CHFR-206ENST00000499045 FOXD1Q16676 465 aa37.59■■■■□ 3.61
CHFR-206ENST00000499045 CPS1P31327 1500 aa37.58■■■■□ 3.61
CHFR-206ENST00000499045 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.57■■■■□ 3.6
CHFR-206ENST00000499045 PLEKHG1Q9ULL1 1385 aa37.56■■■■□ 3.6
CHFR-206ENST00000499045 HRCP23327 699 aa37.56■■■■□ 3.6
CHFR-206ENST00000499045 STRCP1A6NGW2 1772 aa37.55■■■■□ 3.6
CHFR-206ENST00000499045 KIF1BO60333 1816 aa37.54■■■■□ 3.6
CHFR-206ENST00000499045 PPP1R15AO75807 674 aaPredicted RBP37.51■■■■□ 3.6
CHFR-206ENST00000499045 SLC26A8Q96RN1 970 aa37.49■■■■□ 3.59
CHFR-206ENST00000499045 NUTM2DQ5VT03 806 aaPredicted RBP37.48■■■■□ 3.59
CHFR-206ENST00000499045 ZNF326Q5BKZ1 582 aaKnown RBP37.45■■■■□ 3.59
CHFR-206ENST00000499045 NEXMIFQ5QGS0 1516 aa37.44■■■■□ 3.58
CHFR-206ENST00000499045 CCDC144AA2RUR9 1427 aa37.43■■■■□ 3.58
CHFR-206ENST00000499045 BCANQ96GW7 911 aa37.42■■■■□ 3.58
CHFR-206ENST00000499045 ADAMTS13Q76LX8 1427 aa37.42■■■■□ 3.58
CHFR-206ENST00000499045 LRRC7Q96NW7 1537 aa37.41■■■■□ 3.58
CHFR-206ENST00000499045 SENP3Q9H4L4 574 aaPredicted RBP37.4■■■■□ 3.58
CHFR-206ENST00000499045 TBX22Q9Y458 520 aa37.39■■■■□ 3.58
CHFR-206ENST00000499045 KCNA6P17658 529 aa37.37■■■■□ 3.57
CHFR-206ENST00000499045 DIP2AQ14689 1571 aa37.36■■■■□ 3.57
CHFR-206ENST00000499045 NWD1Q149M9 1564 aa37.35■■■■□ 3.57
CHFR-206ENST00000499045 SETBP1Q9Y6X0 1596 aa37.34■■■■□ 3.57
CHFR-206ENST00000499045 NRXN3Q9Y4C0 1643 aa37.34■■■■□ 3.57
CHFR-206ENST00000499045 SPATA31E1Q6ZUB1 1445 aa37.34■■■■□ 3.57
CHFR-206ENST00000499045 RPGRIP1LQ68CZ1 1315 aa37.33■■■■□ 3.57
CHFR-206ENST00000499045 CHD2O14647 1828 aaKnown RBP37.31■■■■□ 3.56
CHFR-206ENST00000499045 PPLO60437 1756 aa37.28■■■■□ 3.56
CHFR-206ENST00000499045 ANKRD30BQ9BXX2 1392 aa37.28■■■■□ 3.56
CHFR-206ENST00000499045 PIK3R4Q99570 1358 aa37.27■■■■□ 3.56
CHFR-206ENST00000499045 XIRP1Q702N8 1843 aaKnown RBP37.26■■■■□ 3.56
CHFR-206ENST00000499045 NKTRP30414 1462 aaKnown RBP37.26■■■■□ 3.56
CHFR-206ENST00000499045 UBAP1LF5GYI3 381 aa37.24■■■■□ 3.55
CHFR-206ENST00000499045 VGFO15240 615 aaPredicted RBP37.24■■■■□ 3.55
CHFR-206ENST00000499045 RGL3Q3MIN7 710 aa37.19■■■■□ 3.54
CHFR-206ENST00000499045 IFT172Q9UG01 1749 aa37.19■■■■□ 3.54
CHFR-206ENST00000499045 TMEM94Q12767 1356 aa37.18■■■■□ 3.54
CHFR-206ENST00000499045 ALKQ9UM73 1620 aa37.18■■■■□ 3.54
CHFR-206ENST00000499045 PROSER2Q86WR7 435 aaPredicted RBP37.17■■■■□ 3.54
CHFR-206ENST00000499045 PTPRUQ92729 1446 aa37.17■■■■□ 3.54
CHFR-206ENST00000499045 METP08581 1390 aa37.15■■■■□ 3.54
CHFR-206ENST00000499045 TOM1O60784 492 aa37.14■■■■□ 3.54
CHFR-206ENST00000499045 TRIM26Q12899 539 aaPredicted RBP37.12■■■■□ 3.53
CHFR-206ENST00000499045 SETD1AO15047 1707 aaKnown RBP37.12■■■■□ 3.53
CHFR-206ENST00000499045 XRN1Q8IZH2 1706 aaKnown RBP37.1■■■■□ 3.53
CHFR-206ENST00000499045 AMOTL2Q9Y2J4 779 aa37.1■■■■□ 3.53
CHFR-206ENST00000499045 ADGRF5Q8IZF2 1346 aa37.1■■■■□ 3.53
CHFR-206ENST00000499045 RBM33Q96EV2 1170 aaKnown RBP37.09■■■■□ 3.53
CHFR-206ENST00000499045 NCOA3Q9Y6Q9 1424 aa37.04■■■■□ 3.52
CHFR-206ENST00000499045 PIK3C2GO75747 1445 aa37.01■■■■□ 3.51
CHFR-206ENST00000499045 PIP4K2BP78356 416 aa37■■■■□ 3.51
CHFR-206ENST00000499045 MYOM2P54296 1465 aa37■■■■□ 3.51
CHFR-206ENST00000499045 NRXN1Q9ULB1 1477 aa36.99■■■■□ 3.51
CHFR-206ENST00000499045 MSH6P52701 1360 aa36.96■■■■□ 3.51
CHFR-206ENST00000499045 PRAG1Q86YV5 1406 aa36.94■■■■□ 3.5
CHFR-206ENST00000499045 SCAF1Q9H7N4 1312 aaKnown RBP36.94■■■■□ 3.5
CHFR-206ENST00000499045 PTCH1Q13635 1447 aa36.89■■■■□ 3.5
CHFR-206ENST00000499045 ASXL1Q8IXJ9 1541 aa36.88■■■■□ 3.49
CHFR-206ENST00000499045 DHX57Q6P158 1386 aaKnown RBP36.88■■■■□ 3.49
CHFR-206ENST00000499045 C19orf44Q9H6X5 657 aa36.87■■■■□ 3.49
CHFR-206ENST00000499045 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.86■■■■□ 3.49
CHFR-206ENST00000499045 C14orf93Q9H972 538 aaKnown RBP36.86■■■■□ 3.49
CHFR-206ENST00000499045 C14orf37Q86TY3 774 aa36.85■■■■□ 3.49
CHFR-206ENST00000499045 ROBO2Q9HCK4 1378 aa36.85■■■■□ 3.49
CHFR-206ENST00000499045 STAC3Q96MF2 364 aa36.84■■■■□ 3.49
CHFR-206ENST00000499045 FAM135BQ49AJ0 1406 aa36.84■■■■□ 3.49
CHFR-206ENST00000499045 DCAF11Q8TEB1 546 aa36.83■■■■□ 3.49
CHFR-206ENST00000499045 LAMC1P11047 1609 aa36.82■■■■□ 3.49
CHFR-206ENST00000499045 HSPA1LP34931 641 aa36.82■■■■□ 3.48
CHFR-206ENST00000499045 LRPPRCP42704 1394 aaKnown RBP36.8■■■■□ 3.48
CHFR-206ENST00000499045 TECPR2O15040 1411 aa36.79■■■■□ 3.48
CHFR-206ENST00000499045 DCCP43146 1447 aa36.79■■■■□ 3.48
CHFR-206ENST00000499045 CFAP70Q5T0N1 1121 aa36.79■■■■□ 3.48
CHFR-206ENST00000499045 TMEM132EQ6IEE7 984 aa36.79■■■■□ 3.48
CHFR-206ENST00000499045 SLAIN2Q9P270 581 aa36.79■■■■□ 3.48
CHFR-206ENST00000499045 ADGRL3Q9HAR2 1447 aa36.78■■■■□ 3.48
CHFR-206ENST00000499045 CADPS2Q86UW7 1296 aa36.78■■■■□ 3.48
CHFR-206ENST00000499045 KDM2AQ9Y2K7 1162 aa36.77■■■■□ 3.48
CHFR-206ENST00000499045 ABCC11Q96J66 1382 aa36.77■■■■□ 3.48
CHFR-206ENST00000499045 NALCNQ8IZF0 1738 aa36.76■■■■□ 3.47
CHFR-206ENST00000499045 KNDC1Q76NI1 1749 aa36.75■■■■□ 3.47
CHFR-206ENST00000499045 YTHDC2Q9H6S0 1430 aaKnown RBP36.75■■■■□ 3.47
CHFR-206ENST00000499045 ROBO1Q9Y6N7 1651 aa36.74■■■■□ 3.47
CHFR-206ENST00000499045 ATF3P18847 181 aa36.74■■■■□ 3.47
CHFR-206ENST00000499045 STK26Q9P289 416 aa36.71■■■■□ 3.47
CHFR-206ENST00000499045 SIN3AQ96ST3 1273 aa36.69■■■■□ 3.46
CHFR-206ENST00000499045 ADGRB1O14514 1584 aa36.69■■■■□ 3.46
CHFR-206ENST00000499045 SIRT1Q96EB6 747 aa36.65■■■■□ 3.46
CHFR-206ENST00000499045 MST1RQ04912 1400 aa36.65■■■■□ 3.46
CHFR-206ENST00000499045 WAPLQ7Z5K2 1190 aa36.62■■■■□ 3.45
CHFR-206ENST00000499045 PLEKHH1Q9ULM0 1364 aa36.61■■■■□ 3.45
CHFR-206ENST00000499045 L3MBTL2Q969R5 705 aa36.58■■■■□ 3.45
CHFR-206ENST00000499045 DLC1Q96QB1 1528 aa36.58■■■■□ 3.45
CHFR-206ENST00000499045 NEUROD1Q13562 356 aa36.57■■■■□ 3.44
CHFR-206ENST00000499045 CDC42BPGQ6DT37 1551 aa36.56■■■■□ 3.44
CHFR-206ENST00000499045 BRINP3Q76B58 766 aa36.55■■■■□ 3.44
CHFR-206ENST00000499045 KIAA1210Q9ULL0 1709 aa36.55■■■■□ 3.44
CHFR-206ENST00000499045 AHDC1Q5TGY3 1603 aaPredicted RBP36.51■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms