RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 ZNF326Q5BKZ1 582 aaKnown RBP24.7■■□□□ 1.54
PRKCB-210ENST00000498739 KIF1BO60333 1816 aa24.69■■□□□ 1.54
PRKCB-210ENST00000498739 PPP1R15AO75807 674 aaPredicted RBP24.68■■□□□ 1.54
PRKCB-210ENST00000498739 HDGFP51858 240 aaKnown RBP24.68■■□□□ 1.54
PRKCB-210ENST00000498739 NUTM2DQ5VT03 806 aaPredicted RBP24.66■■□□□ 1.54
PRKCB-210ENST00000498739 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.66■■□□□ 1.54
PRKCB-210ENST00000498739 BCANQ96GW7 911 aa24.63■■□□□ 1.53
PRKCB-210ENST00000498739 SENP3Q9H4L4 574 aaPredicted RBP24.63■■□□□ 1.53
PRKCB-210ENST00000498739 ZNF335Q9H4Z2 1342 aaPredicted RBP24.62■■□□□ 1.53
PRKCB-210ENST00000498739 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
PRKCB-210ENST00000498739 PLEKHG1Q9ULL1 1385 aa24.61■■□□□ 1.53
PRKCB-210ENST00000498739 NEXMIFQ5QGS0 1516 aa24.6■■□□□ 1.53
PRKCB-210ENST00000498739 LTBP4Q8N2S1 1624 aa24.57■■□□□ 1.52
PRKCB-210ENST00000498739 SLC26A8Q96RN1 970 aa24.57■■□□□ 1.52
PRKCB-210ENST00000498739 SPATA31E1Q6ZUB1 1445 aa24.57■■□□□ 1.52
PRKCB-210ENST00000498739 RGL3Q3MIN7 710 aa24.56■■□□□ 1.52
PRKCB-210ENST00000498739 RPGRIP1LQ68CZ1 1315 aa24.55■■□□□ 1.52
PRKCB-210ENST00000498739 PCGF6Q9BYE7 350 aa24.54■■□□□ 1.52
PRKCB-210ENST00000498739 CERKQ8TCT0 537 aa24.52■■□□□ 1.52
PRKCB-210ENST00000498739 PPLO60437 1756 aa24.5■■□□□ 1.51
PRKCB-210ENST00000498739 VGFO15240 615 aaPredicted RBP24.5■■□□□ 1.51
PRKCB-210ENST00000498739 ADAMTS13Q76LX8 1427 aa24.5■■□□□ 1.51
PRKCB-210ENST00000498739 DHX57Q6P158 1386 aaKnown RBP24.49■■□□□ 1.51
PRKCB-210ENST00000498739 CPS1P31327 1500 aa24.49■■□□□ 1.51
PRKCB-210ENST00000498739 DIP2AQ14689 1571 aa24.48■■□□□ 1.51
PRKCB-210ENST00000498739 SETBP1Q9Y6X0 1596 aa24.48■■□□□ 1.51
PRKCB-210ENST00000498739 TBX22Q9Y458 520 aa24.47■■□□□ 1.51
PRKCB-210ENST00000498739 NRXN3Q9Y4C0 1643 aa24.46■■□□□ 1.51
PRKCB-210ENST00000498739 STRCP1A6NGW2 1772 aa24.46■■□□□ 1.51
PRKCB-210ENST00000498739 IFT172Q9UG01 1749 aa24.46■■□□□ 1.51
PRKCB-210ENST00000498739 ADGRF5Q8IZF2 1346 aa24.42■■□□□ 1.5
PRKCB-210ENST00000498739 KCNA6P17658 529 aa24.42■■□□□ 1.5
PRKCB-210ENST00000498739 NWD1Q149M9 1564 aa24.41■■□□□ 1.5
PRKCB-210ENST00000498739 IQSEC2Q5JU85 1478 aa24.39■■□□□ 1.5
PRKCB-210ENST00000498739 LRRC7Q96NW7 1537 aa24.39■■□□□ 1.49
PRKCB-210ENST00000498739 PIK3R4Q99570 1358 aa24.39■■□□□ 1.49
PRKCB-210ENST00000498739 MYOM2P54296 1465 aa24.38■■□□□ 1.49
PRKCB-210ENST00000498739 CHD2O14647 1828 aaKnown RBP24.37■■□□□ 1.49
PRKCB-210ENST00000498739 ALKQ9UM73 1620 aa24.36■■□□□ 1.49
PRKCB-210ENST00000498739 SIN3AQ96ST3 1273 aa24.36■■□□□ 1.49
PRKCB-210ENST00000498739 METP08581 1390 aa24.36■■□□□ 1.49
PRKCB-210ENST00000498739 NKTRP30414 1462 aaKnown RBP24.36■■□□□ 1.49
PRKCB-210ENST00000498739 DCAF11Q8TEB1 546 aa24.35■■□□□ 1.49
PRKCB-210ENST00000498739 PIK3C2GO75747 1445 aa24.35■■□□□ 1.49
PRKCB-210ENST00000498739 PTPRUQ92729 1446 aa24.35■■□□□ 1.49
PRKCB-210ENST00000498739 KDM2AQ9Y2K7 1162 aa24.34■■□□□ 1.49
PRKCB-210ENST00000498739 SETD1AO15047 1707 aaKnown RBP24.33■■□□□ 1.49
PRKCB-210ENST00000498739 PROSER2Q86WR7 435 aaPredicted RBP24.33■■□□□ 1.49
PRKCB-210ENST00000498739 AMOTL2Q9Y2J4 779 aa24.33■■□□□ 1.49
PRKCB-210ENST00000498739 NRXN1Q9ULB1 1477 aa24.32■■□□□ 1.48
PRKCB-210ENST00000498739 NEUROD1Q13562 356 aa24.32■■□□□ 1.48
PRKCB-210ENST00000498739 FBXO41Q8TF61 875 aa24.31■■□□□ 1.48
PRKCB-210ENST00000498739 TMEM94Q12767 1356 aa24.3■■□□□ 1.48
PRKCB-210ENST00000498739 RBM33Q96EV2 1170 aaKnown RBP24.3■■□□□ 1.48
PRKCB-210ENST00000498739 XRN1Q8IZH2 1706 aaKnown RBP24.29■■□□□ 1.48
PRKCB-210ENST00000498739 STAC3Q96MF2 364 aa24.27■■□□□ 1.48
PRKCB-210ENST00000498739 XIRP1Q702N8 1843 aaKnown RBP24.26■■□□□ 1.47
PRKCB-210ENST00000498739 UBAP1LF5GYI3 381 aa24.25■■□□□ 1.47
PRKCB-210ENST00000498739 CFAP70Q5T0N1 1121 aa24.25■■□□□ 1.47
PRKCB-210ENST00000498739 LAMC1P11047 1609 aa24.24■■□□□ 1.47
PRKCB-210ENST00000498739 C14orf93Q9H972 538 aaKnown RBP24.24■■□□□ 1.47
PRKCB-210ENST00000498739 ASXL1Q8IXJ9 1541 aa24.24■■□□□ 1.47
PRKCB-210ENST00000498739 TMEM132EQ6IEE7 984 aa24.22■■□□□ 1.47
PRKCB-210ENST00000498739 ILDR1Q86SU0 546 aaPredicted RBP24.22■■□□□ 1.47
PRKCB-210ENST00000498739 L3MBTL2Q969R5 705 aa24.22■■□□□ 1.47
PRKCB-210ENST00000498739 C14orf37Q86TY3 774 aa24.2■■□□□ 1.46
PRKCB-210ENST00000498739 TOM1O60784 492 aa24.19■■□□□ 1.46
PRKCB-210ENST00000498739 STK26Q9P289 416 aa24.19■■□□□ 1.46
PRKCB-210ENST00000498739 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
PRKCB-210ENST00000498739 NCOA3Q9Y6Q9 1424 aa24.18■■□□□ 1.46
PRKCB-210ENST00000498739 MSH6P52701 1360 aa24.18■■□□□ 1.46
PRKCB-210ENST00000498739 LRPPRCP42704 1394 aaKnown RBP24.17■■□□□ 1.46
PRKCB-210ENST00000498739 PRAG1Q86YV5 1406 aa24.17■■□□□ 1.46
PRKCB-210ENST00000498739 YTHDC2Q9H6S0 1430 aaKnown RBP24.17■■□□□ 1.46
PRKCB-210ENST00000498739 ROBO2Q9HCK4 1378 aa24.16■■□□□ 1.46
PRKCB-210ENST00000498739 TONSLQ96HA7 1378 aa24.16■■□□□ 1.46
PRKCB-210ENST00000498739 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
PRKCB-210ENST00000498739 PIP4K2BP78356 416 aa24.14■■□□□ 1.45
PRKCB-210ENST00000498739 ADGRB1O14514 1584 aa24.13■■□□□ 1.45
PRKCB-210ENST00000498739 TECPR2O15040 1411 aa24.13■■□□□ 1.45
PRKCB-210ENST00000498739 ABCC11Q96J66 1382 aa24.13■■□□□ 1.45
PRKCB-210ENST00000498739 KNDC1Q76NI1 1749 aa24.13■■□□□ 1.45
PRKCB-210ENST00000498739 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
PRKCB-210ENST00000498739 C19orf44Q9H6X5 657 aa24.11■■□□□ 1.45
PRKCB-210ENST00000498739 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
PRKCB-210ENST00000498739 ADGRL3Q9HAR2 1447 aa24.1■■□□□ 1.45
PRKCB-210ENST00000498739 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
PRKCB-210ENST00000498739 NALCNQ8IZF0 1738 aa24.08■■□□□ 1.45
PRKCB-210ENST00000498739 KIAA1210Q9ULL0 1709 aa24.08■■□□□ 1.45
PRKCB-210ENST00000498739 WAPLQ7Z5K2 1190 aa24.08■■□□□ 1.45
PRKCB-210ENST00000498739 ATF3P18847 181 aa24.07■■□□□ 1.44
PRKCB-210ENST00000498739 CADPS2Q86UW7 1296 aa24.06■■□□□ 1.44
PRKCB-210ENST00000498739 PLEKHH1Q9ULM0 1364 aa24.05■■□□□ 1.44
PRKCB-210ENST00000498739 DCCP43146 1447 aa24.05■■□□□ 1.44
PRKCB-210ENST00000498739 FAM135BQ49AJ0 1406 aa24.05■■□□□ 1.44
PRKCB-210ENST00000498739 TRAK1Q9UPV9 953 aa24.05■■□□□ 1.44
PRKCB-210ENST00000498739 DLC1Q96QB1 1528 aa24.05■■□□□ 1.44
PRKCB-210ENST00000498739 NBPF1Q3BBV0 1214 aa24.04■■□□□ 1.44
PRKCB-210ENST00000498739 SIRT1Q96EB6 747 aa24.03■■□□□ 1.44
PRKCB-210ENST00000498739 PRAM1Q96QH2 718 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms