RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 PIK3C2BO00750 1634 aa18.49■□□□□ 0.55
TMEM39B-209ENST00000498613 KDM5AP29375 1690 aaKnown RBP18.47■□□□□ 0.55
TMEM39B-209ENST00000498613 ZNF335Q9H4Z2 1342 aaPredicted RBP18.47■□□□□ 0.55
TMEM39B-209ENST00000498613 ADGRB3O60242 1522 aa18.46■□□□□ 0.55
TMEM39B-209ENST00000498613 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
TMEM39B-209ENST00000498613 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
TMEM39B-209ENST00000498613 KIF1BO60333 1816 aa18.44■□□□□ 0.54
TMEM39B-209ENST00000498613 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
TMEM39B-209ENST00000498613 LTKP29376 864 aa18.44■□□□□ 0.54
TMEM39B-209ENST00000498613 DHX57Q6P158 1386 aaKnown RBP18.43■□□□□ 0.54
TMEM39B-209ENST00000498613 SCAF11Q99590 1463 aaKnown RBP18.43■□□□□ 0.54
TMEM39B-209ENST00000498613 SLIT1O75093 1534 aa18.43■□□□□ 0.54
TMEM39B-209ENST00000498613 TMEM131LA2VDJ0 1609 aa18.42■□□□□ 0.54
TMEM39B-209ENST00000498613 UBAP1LF5GYI3 381 aa18.42■□□□□ 0.54
TMEM39B-209ENST00000498613 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
TMEM39B-209ENST00000498613 NUTM2DQ5VT03 806 aaPredicted RBP18.42■□□□□ 0.54
TMEM39B-209ENST00000498613 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
TMEM39B-209ENST00000498613 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
TMEM39B-209ENST00000498613 ARHGAP23Q9P227 1491 aa18.41■□□□□ 0.54
TMEM39B-209ENST00000498613 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
TMEM39B-209ENST00000498613 DCAF11Q8TEB1 546 aa18.37■□□□□ 0.53
TMEM39B-209ENST00000498613 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
TMEM39B-209ENST00000498613 MED14O60244 1454 aa18.37■□□□□ 0.53
TMEM39B-209ENST00000498613 POLR1AO95602 1720 aaPredicted RBP18.36■□□□□ 0.53
TMEM39B-209ENST00000498613 SIN3AQ96ST3 1273 aa18.36■□□□□ 0.53
TMEM39B-209ENST00000498613 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
TMEM39B-209ENST00000498613 KDM2AQ9Y2K7 1162 aa18.36■□□□□ 0.53
TMEM39B-209ENST00000498613 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
TMEM39B-209ENST00000498613 ZFYVE9O95405 1425 aa18.35■□□□□ 0.53
TMEM39B-209ENST00000498613 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
TMEM39B-209ENST00000498613 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
TMEM39B-209ENST00000498613 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
TMEM39B-209ENST00000498613 SENP3Q9H4L4 574 aaPredicted RBP18.34■□□□□ 0.53
TMEM39B-209ENST00000498613 MYO5BQ9ULV0 1848 aa18.33■□□□□ 0.53
TMEM39B-209ENST00000498613 NEURL4Q96JN8 1562 aa18.33■□□□□ 0.52
TMEM39B-209ENST00000498613 CPS1P31327 1500 aa18.29■□□□□ 0.52
TMEM39B-209ENST00000498613 TONSLQ96HA7 1378 aa18.29■□□□□ 0.52
TMEM39B-209ENST00000498613 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
TMEM39B-209ENST00000498613 KCNA6P17658 529 aa18.28■□□□□ 0.52
TMEM39B-209ENST00000498613 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
TMEM39B-209ENST00000498613 ADGRF5Q8IZF2 1346 aa18.27■□□□□ 0.52
TMEM39B-209ENST00000498613 HSPA1LP34931 641 aa18.27■□□□□ 0.52
TMEM39B-209ENST00000498613 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
TMEM39B-209ENST00000498613 NEXMIFQ5QGS0 1516 aa18.27■□□□□ 0.51
TMEM39B-209ENST00000498613 PIK3R4Q99570 1358 aa18.25■□□□□ 0.51
TMEM39B-209ENST00000498613 ALKQ9UM73 1620 aa18.24■□□□□ 0.51
TMEM39B-209ENST00000498613 C14orf93Q9H972 538 aaKnown RBP18.24■□□□□ 0.51
TMEM39B-209ENST00000498613 PROSER2Q86WR7 435 aaPredicted RBP18.23■□□□□ 0.51
TMEM39B-209ENST00000498613 AMOTL2Q9Y2J4 779 aa18.23■□□□□ 0.51
TMEM39B-209ENST00000498613 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
TMEM39B-209ENST00000498613 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
TMEM39B-209ENST00000498613 PPLO60437 1756 aa18.22■□□□□ 0.51
TMEM39B-209ENST00000498613 TOM1O60784 492 aa18.21■□□□□ 0.51
TMEM39B-209ENST00000498613 MYOM2P54296 1465 aa18.2■□□□□ 0.5
TMEM39B-209ENST00000498613 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
TMEM39B-209ENST00000498613 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
TMEM39B-209ENST00000498613 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
TMEM39B-209ENST00000498613 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
TMEM39B-209ENST00000498613 C14orf37Q86TY3 774 aa18.18■□□□□ 0.5
TMEM39B-209ENST00000498613 STRCP1A6NGW2 1772 aa18.17■□□□□ 0.5
TMEM39B-209ENST00000498613 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
TMEM39B-209ENST00000498613 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
TMEM39B-209ENST00000498613 STK26Q9P289 416 aa18.16■□□□□ 0.5
TMEM39B-209ENST00000498613 METP08581 1390 aa18.16■□□□□ 0.5
TMEM39B-209ENST00000498613 NRXN1Q9ULB1 1477 aa18.14■□□□□ 0.49
TMEM39B-209ENST00000498613 IFT172Q9UG01 1749 aa18.13■□□□□ 0.49
TMEM39B-209ENST00000498613 SIRT1Q96EB6 747 aa18.12■□□□□ 0.49
TMEM39B-209ENST00000498613 POGKQ9P215 609 aa18.11■□□□□ 0.49
TMEM39B-209ENST00000498613 ABCC11Q96J66 1382 aa18.1■□□□□ 0.49
TMEM39B-209ENST00000498613 LRRC7Q96NW7 1537 aa18.09■□□□□ 0.49
TMEM39B-209ENST00000498613 NKTRP30414 1462 aaKnown RBP18.09■□□□□ 0.49
TMEM39B-209ENST00000498613 PRAG1Q86YV5 1406 aa18.09■□□□□ 0.49
TMEM39B-209ENST00000498613 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
TMEM39B-209ENST00000498613 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
TMEM39B-209ENST00000498613 C19orf44Q9H6X5 657 aa18.09■□□□□ 0.49
TMEM39B-209ENST00000498613 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
TMEM39B-209ENST00000498613 NCOA3Q9Y6Q9 1424 aa18.08■□□□□ 0.49
TMEM39B-209ENST00000498613 TMEM94Q12767 1356 aa18.08■□□□□ 0.49
TMEM39B-209ENST00000498613 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
TMEM39B-209ENST00000498613 LAMC1P11047 1609 aa18.08■□□□□ 0.48
TMEM39B-209ENST00000498613 NRXN3Q9Y4C0 1643 aa18.08■□□□□ 0.48
TMEM39B-209ENST00000498613 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
TMEM39B-209ENST00000498613 ATF3P18847 181 aa18.07■□□□□ 0.48
TMEM39B-209ENST00000498613 MSH6P52701 1360 aa18.06■□□□□ 0.48
TMEM39B-209ENST00000498613 NBPF1Q3BBV0 1214 aa18.06■□□□□ 0.48
TMEM39B-209ENST00000498613 PTPRUQ92729 1446 aa18.06■□□□□ 0.48
TMEM39B-209ENST00000498613 ROCK2O75116 1388 aaKnown RBP18.05■□□□□ 0.48
TMEM39B-209ENST00000498613 CADPS2Q86UW7 1296 aa18.05■□□□□ 0.48
TMEM39B-209ENST00000498613 RBM33Q96EV2 1170 aaKnown RBP18.05■□□□□ 0.48
TMEM39B-209ENST00000498613 CARD11Q9BXL7 1154 aa18.05■□□□□ 0.48
TMEM39B-209ENST00000498613 NBPF8Q3BBV2 869 aa18.04■□□□□ 0.48
TMEM39B-209ENST00000498613 XIRP1Q702N8 1843 aaKnown RBP18.03■□□□□ 0.48
TMEM39B-209ENST00000498613 NWD1Q149M9 1564 aa18.03■□□□□ 0.48
TMEM39B-209ENST00000498613 WAPLQ7Z5K2 1190 aa18.02■□□□□ 0.48
TMEM39B-209ENST00000498613 PRAM1Q96QH2 718 aa18.02■□□□□ 0.48
TMEM39B-209ENST00000498613 PTCH1Q13635 1447 aa18.01■□□□□ 0.47
TMEM39B-209ENST00000498613 KIAA1210Q9ULL0 1709 aa18.01■□□□□ 0.47
TMEM39B-209ENST00000498613 FAM135BQ49AJ0 1406 aa18■□□□□ 0.47
TMEM39B-209ENST00000498613 SLC24A1O60721 1099 aa18■□□□□ 0.47
TMEM39B-209ENST00000498613 EIF3AQ14152 1382 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms