RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 SENP3Q9H4L4 574 aaPredicted RBP24.85■■□□□ 1.57
ABCF3-218ENST00000498136 ZFYVE9O95405 1425 aa24.84■■□□□ 1.57
ABCF3-218ENST00000498136 KIF1BO60333 1816 aa24.84■■□□□ 1.57
ABCF3-218ENST00000498136 ACIN1Q9UKV3 1341 aaKnown RBP24.84■■□□□ 1.57
ABCF3-218ENST00000498136 RAB3GAP2Q9H2M9 1393 aa24.83■■□□□ 1.57
ABCF3-218ENST00000498136 CPS1P31327 1500 aa24.83■■□□□ 1.57
ABCF3-218ENST00000498136 ZNF326Q5BKZ1 582 aaKnown RBP24.83■■□□□ 1.57
ABCF3-218ENST00000498136 IQSEC2Q5JU85 1478 aa24.83■■□□□ 1.56
ABCF3-218ENST00000498136 FOXD1Q16676 465 aa24.82■■□□□ 1.56
ABCF3-218ENST00000498136 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.82■■□□□ 1.56
ABCF3-218ENST00000498136 NUTM2DQ5VT03 806 aaPredicted RBP24.81■■□□□ 1.56
ABCF3-218ENST00000498136 MPHOSPH9Q99550 1183 aa24.81■■□□□ 1.56
ABCF3-218ENST00000498136 SLC26A8Q96RN1 970 aa24.8■■□□□ 1.56
ABCF3-218ENST00000498136 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
ABCF3-218ENST00000498136 PLEKHG1Q9ULL1 1385 aa24.78■■□□□ 1.56
ABCF3-218ENST00000498136 CCDC144AA2RUR9 1427 aa24.71■■□□□ 1.55
ABCF3-218ENST00000498136 UBAP1LF5GYI3 381 aa24.71■■□□□ 1.55
ABCF3-218ENST00000498136 LRRC7Q96NW7 1537 aa24.7■■□□□ 1.54
ABCF3-218ENST00000498136 NEXMIFQ5QGS0 1516 aa24.68■■□□□ 1.54
ABCF3-218ENST00000498136 KCNA6P17658 529 aa24.67■■□□□ 1.54
ABCF3-218ENST00000498136 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
ABCF3-218ENST00000498136 TBX22Q9Y458 520 aa24.65■■□□□ 1.54
ABCF3-218ENST00000498136 ADAMTS13Q76LX8 1427 aa24.64■■□□□ 1.54
ABCF3-218ENST00000498136 CHD2O14647 1828 aaKnown RBP24.64■■□□□ 1.54
ABCF3-218ENST00000498136 HRCP23327 699 aa24.64■■□□□ 1.54
ABCF3-218ENST00000498136 NWD1Q149M9 1564 aa24.63■■□□□ 1.53
ABCF3-218ENST00000498136 SCAF1Q9H7N4 1312 aaKnown RBP24.62■■□□□ 1.53
ABCF3-218ENST00000498136 XIRP1Q702N8 1843 aaKnown RBP24.61■■□□□ 1.53
ABCF3-218ENST00000498136 TOM1O60784 492 aa24.61■■□□□ 1.53
ABCF3-218ENST00000498136 RGL3Q3MIN7 710 aa24.61■■□□□ 1.53
ABCF3-218ENST00000498136 PROSER2Q86WR7 435 aaPredicted RBP24.61■■□□□ 1.53
ABCF3-218ENST00000498136 SETBP1Q9Y6X0 1596 aa24.61■■□□□ 1.53
ABCF3-218ENST00000498136 PPLO60437 1756 aa24.61■■□□□ 1.53
ABCF3-218ENST00000498136 VGFO15240 615 aaPredicted RBP24.6■■□□□ 1.53
ABCF3-218ENST00000498136 NRXN3Q9Y4C0 1643 aa24.6■■□□□ 1.53
ABCF3-218ENST00000498136 RPGRIP1LQ68CZ1 1315 aa24.6■■□□□ 1.53
ABCF3-218ENST00000498136 NKTRP30414 1462 aaKnown RBP24.59■■□□□ 1.53
ABCF3-218ENST00000498136 PIP4K2BP78356 416 aa24.58■■□□□ 1.53
ABCF3-218ENST00000498136 TMEM94Q12767 1356 aa24.57■■□□□ 1.52
ABCF3-218ENST00000498136 RBM33Q96EV2 1170 aaKnown RBP24.57■■□□□ 1.52
ABCF3-218ENST00000498136 PIK3R4Q99570 1358 aa24.55■■□□□ 1.52
ABCF3-218ENST00000498136 SPATA31E1Q6ZUB1 1445 aa24.54■■□□□ 1.52
ABCF3-218ENST00000498136 AMOTL2Q9Y2J4 779 aa24.52■■□□□ 1.52
ABCF3-218ENST00000498136 IFT172Q9UG01 1749 aa24.52■■□□□ 1.52
ABCF3-218ENST00000498136 ANKRD30BQ9BXX2 1392 aa24.51■■□□□ 1.51
ABCF3-218ENST00000498136 PTPRUQ92729 1446 aa24.5■■□□□ 1.51
ABCF3-218ENST00000498136 C14orf37Q86TY3 774 aa24.49■■□□□ 1.51
ABCF3-218ENST00000498136 METP08581 1390 aa24.49■■□□□ 1.51
ABCF3-218ENST00000498136 ALKQ9UM73 1620 aa24.48■■□□□ 1.51
ABCF3-218ENST00000498136 MSH6P52701 1360 aa24.47■■□□□ 1.51
ABCF3-218ENST00000498136 ADGRF5Q8IZF2 1346 aa24.46■■□□□ 1.51
ABCF3-218ENST00000498136 XRN1Q8IZH2 1706 aaKnown RBP24.46■■□□□ 1.51
ABCF3-218ENST00000498136 SETD1AO15047 1707 aaKnown RBP24.45■■□□□ 1.5
ABCF3-218ENST00000498136 TRIM26Q12899 539 aaPredicted RBP24.43■■□□□ 1.5
ABCF3-218ENST00000498136 NCOA3Q9Y6Q9 1424 aa24.41■■□□□ 1.5
ABCF3-218ENST00000498136 HSPA1LP34931 641 aa24.38■■□□□ 1.49
ABCF3-218ENST00000498136 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.38■■□□□ 1.49
ABCF3-218ENST00000498136 PIK3C2GO75747 1445 aa24.36■■□□□ 1.49
ABCF3-218ENST00000498136 MYOM2P54296 1465 aa24.36■■□□□ 1.49
ABCF3-218ENST00000498136 C19orf44Q9H6X5 657 aa24.35■■□□□ 1.49
ABCF3-218ENST00000498136 ATF3P18847 181 aa24.34■■□□□ 1.49
ABCF3-218ENST00000498136 KDM2AQ9Y2K7 1162 aa24.34■■□□□ 1.49
ABCF3-218ENST00000498136 DCAF11Q8TEB1 546 aa24.33■■□□□ 1.49
ABCF3-218ENST00000498136 ROBO1Q9Y6N7 1651 aa24.33■■□□□ 1.49
ABCF3-218ENST00000498136 CADPS2Q86UW7 1296 aa24.32■■□□□ 1.48
ABCF3-218ENST00000498136 SLAIN2Q9P270 581 aa24.32■■□□□ 1.48
ABCF3-218ENST00000498136 PTCH1Q13635 1447 aa24.31■■□□□ 1.48
ABCF3-218ENST00000498136 STK26Q9P289 416 aa24.31■■□□□ 1.48
ABCF3-218ENST00000498136 LAMC1P11047 1609 aa24.31■■□□□ 1.48
ABCF3-218ENST00000498136 FAM135BQ49AJ0 1406 aa24.3■■□□□ 1.48
ABCF3-218ENST00000498136 TMEM132EQ6IEE7 984 aa24.3■■□□□ 1.48
ABCF3-218ENST00000498136 NRXN1Q9ULB1 1477 aa24.3■■□□□ 1.48
ABCF3-218ENST00000498136 NALCNQ8IZF0 1738 aa24.3■■□□□ 1.48
ABCF3-218ENST00000498136 ROBO2Q9HCK4 1378 aa24.29■■□□□ 1.48
ABCF3-218ENST00000498136 CFAP70Q5T0N1 1121 aa24.28■■□□□ 1.48
ABCF3-218ENST00000498136 ASXL1Q8IXJ9 1541 aa24.28■■□□□ 1.48
ABCF3-218ENST00000498136 ADGRL3Q9HAR2 1447 aa24.27■■□□□ 1.48
ABCF3-218ENST00000498136 C14orf93Q9H972 538 aaKnown RBP24.27■■□□□ 1.48
ABCF3-218ENST00000498136 DCCP43146 1447 aa24.27■■□□□ 1.48
ABCF3-218ENST00000498136 LRPPRCP42704 1394 aaKnown RBP24.25■■□□□ 1.47
ABCF3-218ENST00000498136 PRAG1Q86YV5 1406 aa24.25■■□□□ 1.47
ABCF3-218ENST00000498136 KNDC1Q76NI1 1749 aa24.24■■□□□ 1.47
ABCF3-218ENST00000498136 STAC3Q96MF2 364 aa24.24■■□□□ 1.47
ABCF3-218ENST00000498136 DHX57Q6P158 1386 aaKnown RBP24.24■■□□□ 1.47
ABCF3-218ENST00000498136 YTHDC2Q9H6S0 1430 aaKnown RBP24.24■■□□□ 1.47
ABCF3-218ENST00000498136 ABCC11Q96J66 1382 aa24.21■■□□□ 1.47
ABCF3-218ENST00000498136 PHLPP1O60346 1717 aa24.21■■□□□ 1.47
ABCF3-218ENST00000498136 TECPR2O15040 1411 aa24.2■■□□□ 1.46
ABCF3-218ENST00000498136 NEUROD1Q13562 356 aa24.19■■□□□ 1.46
ABCF3-218ENST00000498136 WAPLQ7Z5K2 1190 aa24.19■■□□□ 1.46
ABCF3-218ENST00000498136 SIN3AQ96ST3 1273 aa24.19■■□□□ 1.46
ABCF3-218ENST00000498136 MST1RQ04912 1400 aa24.18■■□□□ 1.46
ABCF3-218ENST00000498136 DISP3Q9P2K9 1392 aa24.16■■□□□ 1.46
ABCF3-218ENST00000498136 PLEKHH1Q9ULM0 1364 aa24.15■■□□□ 1.46
ABCF3-218ENST00000498136 BRINP3Q76B58 766 aa24.14■■□□□ 1.45
ABCF3-218ENST00000498136 ADGRB1O14514 1584 aa24.13■■□□□ 1.45
ABCF3-218ENST00000498136 TRAK1Q9UPV9 953 aa24.12■■□□□ 1.45
ABCF3-218ENST00000498136 CDC42BPGQ6DT37 1551 aa24.12■■□□□ 1.45
ABCF3-218ENST00000498136 SAFB2Q14151 953 aaKnown RBP eCLIP24.11■■□□□ 1.45
ABCF3-218ENST00000498136 POGKQ9P215 609 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms