RNA–Protein interactions for RNA: ENST00000497430.1

RFC2-212, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 753 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-212ENST00000497430 ZFYVE9O95405 1425 aa16.5■□□□□ 0.23
RFC2-212ENST00000497430 RBM33Q96EV2 1170 aaKnown RBP16.49■□□□□ 0.23
RFC2-212ENST00000497430 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
RFC2-212ENST00000497430 ROCK1Q13464 1354 aa16.47■□□□□ 0.23
RFC2-212ENST00000497430 NWD1Q149M9 1564 aa16.47■□□□□ 0.23
RFC2-212ENST00000497430 IQGAP3Q86VI3 1631 aa16.46■□□□□ 0.23
RFC2-212ENST00000497430 PPARGC1BQ86YN6 1023 aaKnown RBP16.46■□□□□ 0.23
RFC2-212ENST00000497430 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
RFC2-212ENST00000497430 PROSER2Q86WR7 435 aaPredicted RBP16.44■□□□□ 0.22
RFC2-212ENST00000497430 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
RFC2-212ENST00000497430 PLEKHG1Q9ULL1 1385 aa16.43■□□□□ 0.22
RFC2-212ENST00000497430 RGS17Q9UGC6 210 aaPredicted RBP16.42■□□□□ 0.22
RFC2-212ENST00000497430 ROBO1Q9Y6N7 1651 aa16.42■□□□□ 0.22
RFC2-212ENST00000497430 NKTRP30414 1462 aaKnown RBP16.41■□□□□ 0.22
RFC2-212ENST00000497430 ADAMTS13Q76LX8 1427 aa16.4■□□□□ 0.22
RFC2-212ENST00000497430 ITGAEP38570 1179 aa16.4■□□□□ 0.22
RFC2-212ENST00000497430 NUTM2DQ5VT03 806 aaPredicted RBP16.4■□□□□ 0.22
RFC2-212ENST00000497430 TBX22Q9Y458 520 aa16.39■□□□□ 0.21
RFC2-212ENST00000497430 NUP155O75694 1391 aa16.38■□□□□ 0.21
RFC2-212ENST00000497430 CHGAP10645 457 aaKnown RBP16.37■□□□□ 0.21
RFC2-212ENST00000497430 BCANQ96GW7 911 aa16.37■□□□□ 0.21
RFC2-212ENST00000497430 SPHKAPQ2M3C7 1700 aa16.36■□□□□ 0.21
RFC2-212ENST00000497430 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
RFC2-212ENST00000497430 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.34■□□□□ 0.21
RFC2-212ENST00000497430 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
RFC2-212ENST00000497430 SLAIN2Q9P270 581 aa16.34■□□□□ 0.21
RFC2-212ENST00000497430 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
RFC2-212ENST00000497430 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.33■□□□□ 0.21
RFC2-212ENST00000497430 PPP1R15AO75807 674 aaPredicted RBP16.33■□□□□ 0.2
RFC2-212ENST00000497430 PTPRUQ92729 1446 aa16.33■□□□□ 0.2
RFC2-212ENST00000497430 PHLPP1O60346 1717 aa16.32■□□□□ 0.2
RFC2-212ENST00000497430 MSH6P52701 1360 aa16.32■□□□□ 0.2
RFC2-212ENST00000497430 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
RFC2-212ENST00000497430 RRBP1Q9P2E9 1410 aaKnown RBP16.3■□□□□ 0.2
RFC2-212ENST00000497430 NCOA3Q9Y6Q9 1424 aa16.3■□□□□ 0.2
RFC2-212ENST00000497430 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
RFC2-212ENST00000497430 CLTCL1P53675 1640 aa16.28■□□□□ 0.2
RFC2-212ENST00000497430 COL16A1Q07092 1604 aaPredicted RBP16.28■□□□□ 0.2
RFC2-212ENST00000497430 POTEAQ6S8J7 498 aa16.28■□□□□ 0.2
RFC2-212ENST00000497430 NAIPQ13075 1403 aa16.28■□□□□ 0.2
RFC2-212ENST00000497430 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.2
RFC2-212ENST00000497430 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
RFC2-212ENST00000497430 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
RFC2-212ENST00000497430 TRPM2O94759 1503 aa16.26■□□□□ 0.19
RFC2-212ENST00000497430 KIF1BO60333 1816 aa16.26■□□□□ 0.19
RFC2-212ENST00000497430 C19orf44Q9H6X5 657 aa16.25■□□□□ 0.19
RFC2-212ENST00000497430 METP08581 1390 aa16.24■□□□□ 0.19
RFC2-212ENST00000497430 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
RFC2-212ENST00000497430 JCADQ9P266 1359 aa16.22■□□□□ 0.19
RFC2-212ENST00000497430 AHDC1Q5TGY3 1603 aaPredicted RBP16.21■□□□□ 0.19
RFC2-212ENST00000497430 CADPS2Q86UW7 1296 aa16.21■□□□□ 0.19
RFC2-212ENST00000497430 SETD1AO15047 1707 aaKnown RBP16.21■□□□□ 0.19
RFC2-212ENST00000497430 ZNF326Q5BKZ1 582 aaKnown RBP16.2■□□□□ 0.18
RFC2-212ENST00000497430 C14orf37Q86TY3 774 aa16.2■□□□□ 0.18
RFC2-212ENST00000497430 LRP6O75581 1613 aa16.19■□□□□ 0.18
RFC2-212ENST00000497430 ATF3P18847 181 aa16.19■□□□□ 0.18
RFC2-212ENST00000497430 BRINP3Q76B58 766 aa16.19■□□□□ 0.18
RFC2-212ENST00000497430 SHPRHQ149N8 1683 aa16.18■□□□□ 0.18
RFC2-212ENST00000497430 HFM1A2PYH4 1435 aa16.17■□□□□ 0.18
RFC2-212ENST00000497430 NALCNQ8IZF0 1738 aa16.16■□□□□ 0.18
RFC2-212ENST00000497430 MST1RQ04912 1400 aa16.16■□□□□ 0.18
RFC2-212ENST00000497430 NHSL1Q5SYE7 1610 aa16.16■□□□□ 0.18
RFC2-212ENST00000497430 PPLO60437 1756 aa16.15■□□□□ 0.18
RFC2-212ENST00000497430 DCCP43146 1447 aa16.15■□□□□ 0.18
RFC2-212ENST00000497430 TRIM52Q96A61 297 aa16.13■□□□□ 0.17
RFC2-212ENST00000497430 ASXL1Q8IXJ9 1541 aa16.13■□□□□ 0.17
RFC2-212ENST00000497430 SPATA31A6Q5VVP1 1343 aa16.12■□□□□ 0.17
RFC2-212ENST00000497430 ADGRL3Q9HAR2 1447 aa16.11■□□□□ 0.17
RFC2-212ENST00000497430 FOXD1Q16676 465 aa16.11■□□□□ 0.17
RFC2-212ENST00000497430 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
RFC2-212ENST00000497430 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
RFC2-212ENST00000497430 ROBO2Q9HCK4 1378 aa16.1■□□□□ 0.17
RFC2-212ENST00000497430 SETD5Q9C0A6 1442 aa16.1■□□□□ 0.17
RFC2-212ENST00000497430 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
RFC2-212ENST00000497430 RPGRIP1LQ68CZ1 1315 aa16.07■□□□□ 0.16
RFC2-212ENST00000497430 LAMC1P11047 1609 aa16.07■□□□□ 0.16
RFC2-212ENST00000497430 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
RFC2-212ENST00000497430 PTCH1Q13635 1447 aa16.06■□□□□ 0.16
RFC2-212ENST00000497430 PRAG1Q86YV5 1406 aa16.06■□□□□ 0.16
RFC2-212ENST00000497430 C1orf167Q5SNV9 1468 aa16.05■□□□□ 0.16
RFC2-212ENST00000497430 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
RFC2-212ENST00000497430 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
RFC2-212ENST00000497430 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
RFC2-212ENST00000497430 ADGRF5Q8IZF2 1346 aa16.04■□□□□ 0.16
RFC2-212ENST00000497430 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
RFC2-212ENST00000497430 SPATA31E1Q6ZUB1 1445 aa16.03■□□□□ 0.16
RFC2-212ENST00000497430 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
RFC2-212ENST00000497430 PNPLA6Q8IY17 1366 aa16.02■□□□□ 0.16
RFC2-212ENST00000497430 MEX3CQ5U5Q3 659 aaKnown RBP16.02■□□□□ 0.16
RFC2-212ENST00000497430 ZNF772Q68DY9 489 aaPredicted RBP16.02■□□□□ 0.16
RFC2-212ENST00000497430 MPHOSPH9Q99550 1183 aa16.02■□□□□ 0.16
RFC2-212ENST00000497430 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
RFC2-212ENST00000497430 RGL3Q3MIN7 710 aa16■□□□□ 0.15
RFC2-212ENST00000497430 AFF2P51816 1311 aa15.99■□□□□ 0.15
RFC2-212ENST00000497430 RXRBP28702 533 aa15.97■□□□□ 0.15
RFC2-212ENST00000497430 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.15
RFC2-212ENST00000497430 CCDC144AA2RUR9 1427 aa15.96■□□□□ 0.15
RFC2-212ENST00000497430 RGPD8O14715 1765 aaPredicted RBP15.96■□□□□ 0.15
RFC2-212ENST00000497430 TMEM132EQ6IEE7 984 aa15.96■□□□□ 0.15
RFC2-212ENST00000497430 WAPLQ7Z5K2 1190 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms