RNA–Protein interactions for RNA: ENST00000497388.5

CPA4-211, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-211ENST00000497388 FOXD1Q16676 465 aa15.52■□□□□ 0.08
CPA4-211ENST00000497388 CPS1P31327 1500 aa15.5■□□□□ 0.07
CPA4-211ENST00000497388 ZFYVE9O95405 1425 aa15.5■□□□□ 0.07
CPA4-211ENST00000497388 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
CPA4-211ENST00000497388 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
CPA4-211ENST00000497388 IQSEC2Q5JU85 1478 aa15.48■□□□□ 0.07
CPA4-211ENST00000497388 CLTCL1P53675 1640 aa15.48■□□□□ 0.07
CPA4-211ENST00000497388 PIP4K2BP78356 416 aa15.48■□□□□ 0.07
CPA4-211ENST00000497388 RBM33Q96EV2 1170 aaKnown RBP15.48■□□□□ 0.07
CPA4-211ENST00000497388 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
CPA4-211ENST00000497388 LRRC7Q96NW7 1537 aa15.47■□□□□ 0.07
CPA4-211ENST00000497388 TRPM2O94759 1503 aa15.44■□□□□ 0.06
CPA4-211ENST00000497388 PLEKHG1Q9ULL1 1385 aa15.44■□□□□ 0.06
CPA4-211ENST00000497388 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
CPA4-211ENST00000497388 XIRP1Q702N8 1843 aaKnown RBP15.41■□□□□ 0.06
CPA4-211ENST00000497388 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
CPA4-211ENST00000497388 MPHOSPH9Q99550 1183 aa15.41■□□□□ 0.06
CPA4-211ENST00000497388 RAB3GAP2Q9H2M9 1393 aa15.4■□□□□ 0.06
CPA4-211ENST00000497388 ALKQ9UM73 1620 aa15.4■□□□□ 0.06
CPA4-211ENST00000497388 KCNA6P17658 529 aa15.4■□□□□ 0.06
CPA4-211ENST00000497388 HDGFP51858 240 aaKnown RBP15.4■□□□□ 0.06
CPA4-211ENST00000497388 TMEM94Q12767 1356 aa15.39■□□□□ 0.05
CPA4-211ENST00000497388 KIF1BO60333 1816 aa15.39■□□□□ 0.05
CPA4-211ENST00000497388 TOM1O60784 492 aa15.39■□□□□ 0.05
CPA4-211ENST00000497388 PROSER2Q86WR7 435 aaPredicted RBP15.39■□□□□ 0.05
CPA4-211ENST00000497388 ADAMTS13Q76LX8 1427 aa15.39■□□□□ 0.05
CPA4-211ENST00000497388 NEXMIFQ5QGS0 1516 aa15.37■□□□□ 0.05
CPA4-211ENST00000497388 HSPA1LP34931 641 aa15.36■□□□□ 0.05
CPA4-211ENST00000497388 NWD1Q149M9 1564 aa15.36■□□□□ 0.05
CPA4-211ENST00000497388 NRXN3Q9Y4C0 1643 aa15.35■□□□□ 0.05
CPA4-211ENST00000497388 TBX22Q9Y458 520 aa15.35■□□□□ 0.05
CPA4-211ENST00000497388 CHD2O14647 1828 aaKnown RBP15.35■□□□□ 0.05
CPA4-211ENST00000497388 RGL3Q3MIN7 710 aa15.34■□□□□ 0.05
CPA4-211ENST00000497388 CCDC144AA2RUR9 1427 aa15.33■□□□□ 0.04
CPA4-211ENST00000497388 PTPRUQ92729 1446 aa15.33■□□□□ 0.04
CPA4-211ENST00000497388 NKTRP30414 1462 aaKnown RBP15.33■□□□□ 0.04
CPA4-211ENST00000497388 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
CPA4-211ENST00000497388 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
CPA4-211ENST00000497388 AMOTL2Q9Y2J4 779 aa15.31■□□□□ 0.04
CPA4-211ENST00000497388 METP08581 1390 aa15.31■□□□□ 0.04
CPA4-211ENST00000497388 SETBP1Q9Y6X0 1596 aa15.31■□□□□ 0.04
CPA4-211ENST00000497388 PPLO60437 1756 aa15.29■□□□□ 0.04
CPA4-211ENST00000497388 MSH6P52701 1360 aa15.27■□□□□ 0.04
CPA4-211ENST00000497388 SPATA31E1Q6ZUB1 1445 aa15.26■□□□□ 0.03
CPA4-211ENST00000497388 DISP3Q9P2K9 1392 aa15.26■□□□□ 0.03
CPA4-211ENST00000497388 ADGRF5Q8IZF2 1346 aa15.26■□□□□ 0.03
CPA4-211ENST00000497388 VGFO15240 615 aaPredicted RBP15.26■□□□□ 0.03
CPA4-211ENST00000497388 XRN1Q8IZH2 1706 aaKnown RBP15.26■□□□□ 0.03
CPA4-211ENST00000497388 PIK3R4Q99570 1358 aa15.25■□□□□ 0.03
CPA4-211ENST00000497388 RPGRIP1LQ68CZ1 1315 aa15.24■□□□□ 0.03
CPA4-211ENST00000497388 SETD1AO15047 1707 aaKnown RBP15.23■□□□□ 0.03
CPA4-211ENST00000497388 ROBO1Q9Y6N7 1651 aa15.23■□□□□ 0.03
CPA4-211ENST00000497388 SLAIN2Q9P270 581 aa15.22■□□□□ 0.03
CPA4-211ENST00000497388 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.22■□□□□ 0.03
CPA4-211ENST00000497388 IFT172Q9UG01 1749 aa15.22■□□□□ 0.03
CPA4-211ENST00000497388 ANKRD30BQ9BXX2 1392 aa15.21■□□□□ 0.02
CPA4-211ENST00000497388 STK26Q9P289 416 aa15.2■□□□□ 0.02
CPA4-211ENST00000497388 ATF3P18847 181 aa15.19■□□□□ 0.02
CPA4-211ENST00000497388 TMEM132EQ6IEE7 984 aa15.19■□□□□ 0.02
CPA4-211ENST00000497388 ROBO2Q9HCK4 1378 aa15.19■□□□□ 0.02
CPA4-211ENST00000497388 ACIN1Q9UKV3 1341 aaKnown RBP15.18■□□□□ 0.02
CPA4-211ENST00000497388 FAM135BQ49AJ0 1406 aa15.18■□□□□ 0.02
CPA4-211ENST00000497388 C19orf44Q9H6X5 657 aa15.18■□□□□ 0.02
CPA4-211ENST00000497388 NALCNQ8IZF0 1738 aa15.17■□□□□ 0.02
CPA4-211ENST00000497388 KDM2AQ9Y2K7 1162 aa15.17■□□□□ 0.02
CPA4-211ENST00000497388 MED1Q15648 1581 aaPredicted RBP15.16■□□□□ 0.02
CPA4-211ENST00000497388 ASXL1Q8IXJ9 1541 aa15.16■□□□□ 0.02
CPA4-211ENST00000497388 HRCP23327 699 aa15.15■□□□□ 0.02
CPA4-211ENST00000497388 ILDR2Q71H61 639 aa15.15■□□□□ 0.02
CPA4-211ENST00000497388 CADPS2Q86UW7 1296 aa15.15■□□□□ 0.02
CPA4-211ENST00000497388 PIK3C2GO75747 1445 aa15.15■□□□□ 0.02
CPA4-211ENST00000497388 NCOA3Q9Y6Q9 1424 aa15.15■□□□□ 0.02
CPA4-211ENST00000497388 CFAP70Q5T0N1 1121 aa15.14■□□□□ 0.01
CPA4-211ENST00000497388 ADGRL3Q9HAR2 1447 aa15.14■□□□□ 0.01
CPA4-211ENST00000497388 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
CPA4-211ENST00000497388 PTCH1Q13635 1447 aa15.13■□□□□ 0.01
CPA4-211ENST00000497388 WAPLQ7Z5K2 1190 aa15.13■□□□□ 0.01
CPA4-211ENST00000497388 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
CPA4-211ENST00000497388 DDX17Q92841 729 aaKnown RBP15.12■□□□□ 0.01
CPA4-211ENST00000497388 PLEKHH1Q9ULM0 1364 aa15.11■□□□□ 0.01
CPA4-211ENST00000497388 MST1RQ04912 1400 aa15.11■□□□□ 0.01
CPA4-211ENST00000497388 BRINP3Q76B58 766 aa15.11■□□□□ 0.01
CPA4-211ENST00000497388 MYOM2P54296 1465 aa15.11■□□□□ 0.01
CPA4-211ENST00000497388 LRPPRCP42704 1394 aaKnown RBP15.1■□□□□ 0.01
CPA4-211ENST00000497388 NRXN1Q9ULB1 1477 aa15.09■□□□□ 0.01
CPA4-211ENST00000497388 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
CPA4-211ENST00000497388 SAFB2Q14151 953 aaKnown RBP eCLIP15.09■□□□□ 0.01
CPA4-211ENST00000497388 C14orf93Q9H972 538 aaKnown RBP15.09■□□□□ 0.01
CPA4-211ENST00000497388 DCCP43146 1447 aa15.09■□□□□ 0.01
CPA4-211ENST00000497388 YTHDC2Q9H6S0 1430 aaKnown RBP15.09■□□□□ 0.01
CPA4-211ENST00000497388 COL16A1Q07092 1604 aaPredicted RBP15.08■□□□□ 0
CPA4-211ENST00000497388 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0
CPA4-211ENST00000497388 DHX57Q6P158 1386 aaKnown RBP15.08■□□□□ 0
CPA4-211ENST00000497388 ORAI2Q96SN7 254 aa15.06■□□□□ 0
CPA4-211ENST00000497388 SIN3AQ96ST3 1273 aa15.05■□□□□ -0
CPA4-211ENST00000497388 PRAG1Q86YV5 1406 aa15.05■□□□□ -0
CPA4-211ENST00000497388 C1orf167Q5SNV9 1468 aa15.05■□□□□ -0
CPA4-211ENST00000497388 KNDC1Q76NI1 1749 aa15.05■□□□□ -0
CPA4-211ENST00000497388 LAMC1P11047 1609 aa15.04■□□□□ -0
CPA4-211ENST00000497388 AHDC1Q5TGY3 1603 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms