RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
C4A-258ENST00000496659 RPGRIP1LQ68CZ1 1315 aa14.31□□□□□ -0.12
C4A-258ENST00000496659 ZNF335Q9H4Z2 1342 aaPredicted RBP14.31□□□□□ -0.12
C4A-258ENST00000496659 ZNF326Q5BKZ1 582 aaKnown RBP14.3□□□□□ -0.12
C4A-258ENST00000496659 RGL3Q3MIN7 710 aa14.29□□□□□ -0.12
C4A-258ENST00000496659 L3MBTL2Q969R5 705 aa14.29□□□□□ -0.12
C4A-258ENST00000496659 MYOM2P54296 1465 aa14.29□□□□□ -0.12
C4A-258ENST00000496659 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
C4A-258ENST00000496659 PHF23Q9BUL5 403 aaPredicted RBP14.28□□□□□ -0.12
C4A-258ENST00000496659 IFT172Q9UG01 1749 aa14.27□□□□□ -0.12
C4A-258ENST00000496659 HDGFP51858 240 aaKnown RBP14.27□□□□□ -0.13
C4A-258ENST00000496659 DCAF11Q8TEB1 546 aa14.27□□□□□ -0.13
C4A-258ENST00000496659 NEXMIFQ5QGS0 1516 aa14.26□□□□□ -0.13
C4A-258ENST00000496659 PPLO60437 1756 aa14.26□□□□□ -0.13
C4A-258ENST00000496659 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.25□□□□□ -0.13
C4A-258ENST00000496659 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
C4A-258ENST00000496659 THEMISQ8N1K5 641 aaPredicted RBP14.24□□□□□ -0.13
C4A-258ENST00000496659 MYO5BQ9ULV0 1848 aa14.24□□□□□ -0.13
C4A-258ENST00000496659 ZFYVE9O95405 1425 aa14.24□□□□□ -0.13
C4A-258ENST00000496659 RIMS2Q9UQ26 1411 aa14.24□□□□□ -0.13
C4A-258ENST00000496659 VGFO15240 615 aaPredicted RBP14.23□□□□□ -0.13
C4A-258ENST00000496659 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
C4A-258ENST00000496659 TMEM2Q9UHN6 1383 aa14.22□□□□□ -0.13
C4A-258ENST00000496659 SLIT1O75093 1534 aa14.22□□□□□ -0.13
C4A-258ENST00000496659 KDM2AQ9Y2K7 1162 aa14.22□□□□□ -0.13
C4A-258ENST00000496659 ARHGAP23Q9P227 1491 aa14.21□□□□□ -0.13
C4A-258ENST00000496659 ANKLE2Q86XL3 938 aa14.21□□□□□ -0.13
C4A-258ENST00000496659 LAMC1P11047 1609 aa14.21□□□□□ -0.13
C4A-258ENST00000496659 RALGAPBQ86X10 1494 aa14.2□□□□□ -0.14
C4A-258ENST00000496659 NRXN1Q9ULB1 1477 aa14.2□□□□□ -0.14
C4A-258ENST00000496659 EID1Q9Y6B2 187 aa14.2□□□□□ -0.14
C4A-258ENST00000496659 PIK3C2GO75747 1445 aa14.19□□□□□ -0.14
C4A-258ENST00000496659 IQSEC2Q5JU85 1478 aa14.18□□□□□ -0.14
C4A-258ENST00000496659 POLR1AO95602 1720 aaPredicted RBP14.18□□□□□ -0.14
C4A-258ENST00000496659 KIAA1210Q9ULL0 1709 aa14.18□□□□□ -0.14
C4A-258ENST00000496659 TRPM1Q7Z4N2 1603 aa14.18□□□□□ -0.14
C4A-258ENST00000496659 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
C4A-258ENST00000496659 UBAP1LF5GYI3 381 aa14.17□□□□□ -0.14
C4A-258ENST00000496659 ROCK2O75116 1388 aaKnown RBP14.16□□□□□ -0.14
C4A-258ENST00000496659 ADGRF5Q8IZF2 1346 aa14.15□□□□□ -0.14
C4A-258ENST00000496659 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
C4A-258ENST00000496659 SETBP1Q9Y6X0 1596 aa14.15□□□□□ -0.14
C4A-258ENST00000496659 PLEKHG1Q9ULL1 1385 aa14.15□□□□□ -0.14
C4A-258ENST00000496659 LTKP29376 864 aa14.15□□□□□ -0.14
C4A-258ENST00000496659 MED14O60244 1454 aa14.14□□□□□ -0.15
C4A-258ENST00000496659 NBPF8Q3BBV2 869 aa14.14□□□□□ -0.15
C4A-258ENST00000496659 TXNDC2Q86VQ3 553 aa14.14□□□□□ -0.15
C4A-258ENST00000496659 DIP2AQ14689 1571 aa14.13□□□□□ -0.15
C4A-258ENST00000496659 NUTM2DQ5VT03 806 aaPredicted RBP14.12□□□□□ -0.15
C4A-258ENST00000496659 BCANQ96GW7 911 aa14.12□□□□□ -0.15
C4A-258ENST00000496659 GPRASP1Q5JY77 1395 aa14.11□□□□□ -0.15
C4A-258ENST00000496659 STRCP1A6NGW2 1772 aa14.11□□□□□ -0.15
C4A-258ENST00000496659 IQGAP1P46940 1657 aa14.1□□□□□ -0.15
C4A-258ENST00000496659 CARD11Q9BXL7 1154 aa14.1□□□□□ -0.15
C4A-258ENST00000496659 C14orf93Q9H972 538 aaKnown RBP14.1□□□□□ -0.15
C4A-258ENST00000496659 ALKQ9UM73 1620 aa14.1□□□□□ -0.15
C4A-258ENST00000496659 EIF3AQ14152 1382 aaKnown RBP14.09□□□□□ -0.15
C4A-258ENST00000496659 DISP3Q9P2K9 1392 aa14.09□□□□□ -0.15
C4A-258ENST00000496659 ILDR2Q71H61 639 aa14.09□□□□□ -0.15
C4A-258ENST00000496659 NRXN3Q9Y4C0 1643 aa14.08□□□□□ -0.15
C4A-258ENST00000496659 PIP4K2BP78356 416 aa14.08□□□□□ -0.16
C4A-258ENST00000496659 CFAP70Q5T0N1 1121 aa14.08□□□□□ -0.16
C4A-258ENST00000496659 CPS1P31327 1500 aa14.08□□□□□ -0.16
C4A-258ENST00000496659 EIF4G2P78344 907 aaKnown RBP eCLIP14.07□□□□□ -0.16
C4A-258ENST00000496659 ADGRB1O14514 1584 aa14.07□□□□□ -0.16
C4A-258ENST00000496659 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
C4A-258ENST00000496659 SETD1AO15047 1707 aaKnown RBP14.06□□□□□ -0.16
C4A-258ENST00000496659 USP47Q96K76 1375 aa14.06□□□□□ -0.16
C4A-258ENST00000496659 ADAMTS13Q76LX8 1427 aa14.06□□□□□ -0.16
C4A-258ENST00000496659 HSPA1LP34931 641 aa14.05□□□□□ -0.16
C4A-258ENST00000496659 PIK3R4Q99570 1358 aa14.05□□□□□ -0.16
C4A-258ENST00000496659 ASXL1Q8IXJ9 1541 aa14.05□□□□□ -0.16
C4A-258ENST00000496659 TOM1O60784 492 aa14.04□□□□□ -0.16
C4A-258ENST00000496659 NBPF1Q3BBV0 1214 aa14.04□□□□□ -0.16
C4A-258ENST00000496659 TBX22Q9Y458 520 aa14.04□□□□□ -0.16
C4A-258ENST00000496659 LRRC7Q96NW7 1537 aa14.04□□□□□ -0.16
C4A-258ENST00000496659 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
C4A-258ENST00000496659 KNDC1Q76NI1 1749 aa14.02□□□□□ -0.16
C4A-258ENST00000496659 LRPPRCP42704 1394 aaKnown RBP14.02□□□□□ -0.17
C4A-258ENST00000496659 DLC1Q96QB1 1528 aa14.01□□□□□ -0.17
C4A-258ENST00000496659 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
C4A-258ENST00000496659 SLC26A8Q96RN1 970 aa14.01□□□□□ -0.17
C4A-258ENST00000496659 TECPR2O15040 1411 aa13.99□□□□□ -0.17
C4A-258ENST00000496659 METP08581 1390 aa13.99□□□□□ -0.17
C4A-258ENST00000496659 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
C4A-258ENST00000496659 HSPA5P11021 654 aaKnown RBP13.99□□□□□ -0.17
C4A-258ENST00000496659 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
C4A-258ENST00000496659 ARHGEF28Q8N1W1 1705 aaKnown RBP13.98□□□□□ -0.17
C4A-258ENST00000496659 RBM33Q96EV2 1170 aaKnown RBP13.98□□□□□ -0.17
C4A-258ENST00000496659 XIRP1Q702N8 1843 aaKnown RBP13.98□□□□□ -0.17
C4A-258ENST00000496659 PTCH1Q13635 1447 aa13.98□□□□□ -0.17
C4A-258ENST00000496659 TRAK1Q9UPV9 953 aa13.97□□□□□ -0.17
C4A-258ENST00000496659 FAM135BQ49AJ0 1406 aa13.97□□□□□ -0.17
C4A-258ENST00000496659 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
C4A-258ENST00000496659 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
C4A-258ENST00000496659 XRN1Q8IZH2 1706 aaKnown RBP13.96□□□□□ -0.17
C4A-258ENST00000496659 KCNA6P17658 529 aa13.96□□□□□ -0.17
C4A-258ENST00000496659 STK26Q9P289 416 aa13.96□□□□□ -0.17
C4A-258ENST00000496659 SBNO2Q9Y2G9 1366 aa13.96□□□□□ -0.18
C4A-258ENST00000496659 QRICH2Q9H0J4 1663 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms