RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 CHGAP10645 457 aaKnown RBP26.79■■□□□ 1.88
NPDC1-206ENST00000496498 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.79■■□□□ 1.88
NPDC1-206ENST00000496498 MPHOSPH9Q99550 1183 aa26.79■■□□□ 1.88
NPDC1-206ENST00000496498 ZNF335Q9H4Z2 1342 aaPredicted RBP26.79■■□□□ 1.88
NPDC1-206ENST00000496498 CPS1P31327 1500 aa26.78■■□□□ 1.88
NPDC1-206ENST00000496498 PLEKHG1Q9ULL1 1385 aa26.74■■□□□ 1.87
NPDC1-206ENST00000496498 PPP1R15AO75807 674 aaPredicted RBP26.72■■□□□ 1.87
NPDC1-206ENST00000496498 FBXO41Q8TF61 875 aa26.72■■□□□ 1.87
NPDC1-206ENST00000496498 CCDC144AA2RUR9 1427 aa26.7■■□□□ 1.86
NPDC1-206ENST00000496498 DIP2AQ14689 1571 aa26.67■■□□□ 1.86
NPDC1-206ENST00000496498 FOXD1Q16676 465 aa26.65■■□□□ 1.86
NPDC1-206ENST00000496498 ZNF326Q5BKZ1 582 aaKnown RBP26.65■■□□□ 1.86
NPDC1-206ENST00000496498 NEXMIFQ5QGS0 1516 aa26.65■■□□□ 1.86
NPDC1-206ENST00000496498 STRCP1A6NGW2 1772 aa26.63■■□□□ 1.85
NPDC1-206ENST00000496498 BCANQ96GW7 911 aa26.63■■□□□ 1.85
NPDC1-206ENST00000496498 RPGRIP1LQ68CZ1 1315 aa26.63■■□□□ 1.85
NPDC1-206ENST00000496498 ILDR1Q86SU0 546 aaPredicted RBP26.61■■□□□ 1.85
NPDC1-206ENST00000496498 NWD1Q149M9 1564 aa26.61■■□□□ 1.85
NPDC1-206ENST00000496498 SETBP1Q9Y6X0 1596 aa26.61■■□□□ 1.85
NPDC1-206ENST00000496498 SLC26A8Q96RN1 970 aa26.59■■□□□ 1.85
NPDC1-206ENST00000496498 TBX22Q9Y458 520 aa26.59■■□□□ 1.85
NPDC1-206ENST00000496498 PPLO60437 1756 aa26.58■■□□□ 1.85
NPDC1-206ENST00000496498 PIK3R4Q99570 1358 aa26.58■■□□□ 1.84
NPDC1-206ENST00000496498 ADAMTS13Q76LX8 1427 aa26.57■■□□□ 1.84
NPDC1-206ENST00000496498 NKTRP30414 1462 aaKnown RBP26.57■■□□□ 1.84
NPDC1-206ENST00000496498 KCNA6P17658 529 aa26.57■■□□□ 1.84
NPDC1-206ENST00000496498 LRRC7Q96NW7 1537 aa26.56■■□□□ 1.84
NPDC1-206ENST00000496498 SPATA31E1Q6ZUB1 1445 aa26.56■■□□□ 1.84
NPDC1-206ENST00000496498 CHD2O14647 1828 aaKnown RBP26.55■■□□□ 1.84
NPDC1-206ENST00000496498 NRXN3Q9Y4C0 1643 aa26.55■■□□□ 1.84
NPDC1-206ENST00000496498 VGFO15240 615 aaPredicted RBP26.55■■□□□ 1.84
NPDC1-206ENST00000496498 NUTM2DQ5VT03 806 aaPredicted RBP26.55■■□□□ 1.84
NPDC1-206ENST00000496498 ANKRD30BQ9BXX2 1392 aa26.52■■□□□ 1.84
NPDC1-206ENST00000496498 IFT172Q9UG01 1749 aa26.51■■□□□ 1.83
NPDC1-206ENST00000496498 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
NPDC1-206ENST00000496498 XIRP1Q702N8 1843 aaKnown RBP26.46■■□□□ 1.83
NPDC1-206ENST00000496498 TOM1O60784 492 aa26.44■■□□□ 1.82
NPDC1-206ENST00000496498 UBAP1LF5GYI3 381 aa26.43■■□□□ 1.82
NPDC1-206ENST00000496498 SENP3Q9H4L4 574 aaPredicted RBP26.43■■□□□ 1.82
NPDC1-206ENST00000496498 NCOA3Q9Y6Q9 1424 aa26.42■■□□□ 1.82
NPDC1-206ENST00000496498 RGL3Q3MIN7 710 aa26.42■■□□□ 1.82
NPDC1-206ENST00000496498 SETD1AO15047 1707 aaKnown RBP26.42■■□□□ 1.82
NPDC1-206ENST00000496498 XRN1Q8IZH2 1706 aaKnown RBP26.42■■□□□ 1.82
NPDC1-206ENST00000496498 PROSER2Q86WR7 435 aaPredicted RBP26.41■■□□□ 1.82
NPDC1-206ENST00000496498 TMEM94Q12767 1356 aa26.41■■□□□ 1.82
NPDC1-206ENST00000496498 ALKQ9UM73 1620 aa26.4■■□□□ 1.82
NPDC1-206ENST00000496498 MYOM2P54296 1465 aa26.4■■□□□ 1.82
NPDC1-206ENST00000496498 PTPRUQ92729 1446 aa26.37■■□□□ 1.81
NPDC1-206ENST00000496498 METP08581 1390 aa26.36■■□□□ 1.81
NPDC1-206ENST00000496498 AMOTL2Q9Y2J4 779 aa26.36■■□□□ 1.81
NPDC1-206ENST00000496498 PIK3C2GO75747 1445 aa26.35■■□□□ 1.81
NPDC1-206ENST00000496498 STAC3Q96MF2 364 aa26.35■■□□□ 1.81
NPDC1-206ENST00000496498 PRAG1Q86YV5 1406 aa26.34■■□□□ 1.81
NPDC1-206ENST00000496498 LAMC1P11047 1609 aa26.34■■□□□ 1.81
NPDC1-206ENST00000496498 NRXN1Q9ULB1 1477 aa26.34■■□□□ 1.81
NPDC1-206ENST00000496498 ADGRF5Q8IZF2 1346 aa26.34■■□□□ 1.81
NPDC1-206ENST00000496498 MSH6P52701 1360 aa26.33■■□□□ 1.8
NPDC1-206ENST00000496498 PTCH1Q13635 1447 aa26.3■■□□□ 1.8
NPDC1-206ENST00000496498 DCCP43146 1447 aa26.24■■□□□ 1.79
NPDC1-206ENST00000496498 DHX57Q6P158 1386 aaKnown RBP26.23■■□□□ 1.79
NPDC1-206ENST00000496498 KNDC1Q76NI1 1749 aa26.23■■□□□ 1.79
NPDC1-206ENST00000496498 SCAF1Q9H7N4 1312 aaKnown RBP26.23■■□□□ 1.79
NPDC1-206ENST00000496498 PIP4K2BP78356 416 aa26.23■■□□□ 1.79
NPDC1-206ENST00000496498 C14orf37Q86TY3 774 aa26.23■■□□□ 1.79
NPDC1-206ENST00000496498 RBM33Q96EV2 1170 aaKnown RBP26.23■■□□□ 1.79
NPDC1-206ENST00000496498 C19orf44Q9H6X5 657 aa26.23■■□□□ 1.79
NPDC1-206ENST00000496498 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.22■■□□□ 1.79
NPDC1-206ENST00000496498 C14orf93Q9H972 538 aaKnown RBP26.21■■□□□ 1.79
NPDC1-206ENST00000496498 TECPR2O15040 1411 aa26.21■■□□□ 1.79
NPDC1-206ENST00000496498 ASXL1Q8IXJ9 1541 aa26.2■■□□□ 1.79
NPDC1-206ENST00000496498 DCAF11Q8TEB1 546 aa26.2■■□□□ 1.78
NPDC1-206ENST00000496498 LRPPRCP42704 1394 aaKnown RBP26.2■■□□□ 1.78
NPDC1-206ENST00000496498 CADPS2Q86UW7 1296 aa26.19■■□□□ 1.78
NPDC1-206ENST00000496498 FAM135BQ49AJ0 1406 aa26.19■■□□□ 1.78
NPDC1-206ENST00000496498 ADGRL3Q9HAR2 1447 aa26.19■■□□□ 1.78
NPDC1-206ENST00000496498 ABCC11Q96J66 1382 aa26.18■■□□□ 1.78
NPDC1-206ENST00000496498 NALCNQ8IZF0 1738 aa26.17■■□□□ 1.78
NPDC1-206ENST00000496498 ATF3P18847 181 aa26.16■■□□□ 1.78
NPDC1-206ENST00000496498 ROBO2Q9HCK4 1378 aa26.16■■□□□ 1.78
NPDC1-206ENST00000496498 YTHDC2Q9H6S0 1430 aaKnown RBP26.15■■□□□ 1.78
NPDC1-206ENST00000496498 ROBO1Q9Y6N7 1651 aa26.14■■□□□ 1.78
NPDC1-206ENST00000496498 CFAP70Q5T0N1 1121 aa26.13■■□□□ 1.77
NPDC1-206ENST00000496498 SLAIN2Q9P270 581 aa26.13■■□□□ 1.77
NPDC1-206ENST00000496498 KDM2AQ9Y2K7 1162 aa26.13■■□□□ 1.77
NPDC1-206ENST00000496498 KIAA1210Q9ULL0 1709 aa26.12■■□□□ 1.77
NPDC1-206ENST00000496498 SIRT1Q96EB6 747 aa26.11■■□□□ 1.77
NPDC1-206ENST00000496498 ADGRB1O14514 1584 aa26.11■■□□□ 1.77
NPDC1-206ENST00000496498 TMEM132EQ6IEE7 984 aa26.1■■□□□ 1.77
NPDC1-206ENST00000496498 DLC1Q96QB1 1528 aa26.09■■□□□ 1.77
NPDC1-206ENST00000496498 HSPA1LP34931 641 aa26.08■■□□□ 1.77
NPDC1-206ENST00000496498 STK26Q9P289 416 aa26.07■■□□□ 1.76
NPDC1-206ENST00000496498 CDC42BPGQ6DT37 1551 aa26.07■■□□□ 1.76
NPDC1-206ENST00000496498 MST1RQ04912 1400 aa26.05■■□□□ 1.76
NPDC1-206ENST00000496498 SIN3AQ96ST3 1273 aa26.04■■□□□ 1.76
NPDC1-206ENST00000496498 NEUROD1Q13562 356 aa26.01■■□□□ 1.75
NPDC1-206ENST00000496498 L3MBTL2Q969R5 705 aa26■■□□□ 1.75
NPDC1-206ENST00000496498 AHDC1Q5TGY3 1603 aaPredicted RBP25.99■■□□□ 1.75
NPDC1-206ENST00000496498 PHLPP1O60346 1717 aa25.99■■□□□ 1.75
NPDC1-206ENST00000496498 PCGF6Q9BYE7 350 aa25.98■■□□□ 1.75
NPDC1-206ENST00000496498 WAPLQ7Z5K2 1190 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms