RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 TRPM2O94759 1503 aa27.31■■□□□ 1.96
COPS6-210ENST00000496358 CLTCL1P53675 1640 aa27.28■■□□□ 1.96
COPS6-210ENST00000496358 ZFYVE9O95405 1425 aa27.28■■□□□ 1.96
COPS6-210ENST00000496358 RAB3GAP2Q9H2M9 1393 aa27.28■■□□□ 1.96
COPS6-210ENST00000496358 PPP1R15AO75807 674 aaPredicted RBP27.28■■□□□ 1.96
COPS6-210ENST00000496358 BCANQ96GW7 911 aa27.28■■□□□ 1.96
COPS6-210ENST00000496358 MPHOSPH9Q99550 1183 aa27.28■■□□□ 1.96
COPS6-210ENST00000496358 KIF1BO60333 1816 aa27.27■■□□□ 1.96
COPS6-210ENST00000496358 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.26■■□□□ 1.95
COPS6-210ENST00000496358 CPS1P31327 1500 aa27.26■■□□□ 1.95
COPS6-210ENST00000496358 FOXD1Q16676 465 aa27.25■■□□□ 1.95
COPS6-210ENST00000496358 IQSEC2Q5JU85 1478 aa27.25■■□□□ 1.95
COPS6-210ENST00000496358 ZNF326Q5BKZ1 582 aaKnown RBP27.23■■□□□ 1.95
COPS6-210ENST00000496358 NUTM2DQ5VT03 806 aaPredicted RBP27.22■■□□□ 1.95
COPS6-210ENST00000496358 SLC26A8Q96RN1 970 aa27.22■■□□□ 1.95
COPS6-210ENST00000496358 SENP3Q9H4L4 574 aaPredicted RBP27.22■■□□□ 1.95
COPS6-210ENST00000496358 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
COPS6-210ENST00000496358 PLEKHG1Q9ULL1 1385 aa27.21■■□□□ 1.95
COPS6-210ENST00000496358 HRCP23327 699 aa27.14■■□□□ 1.94
COPS6-210ENST00000496358 CCDC144AA2RUR9 1427 aa27.13■■□□□ 1.93
COPS6-210ENST00000496358 LRRC7Q96NW7 1537 aa27.11■■□□□ 1.93
COPS6-210ENST00000496358 KCNA6P17658 529 aa27.1■■□□□ 1.93
COPS6-210ENST00000496358 TBX22Q9Y458 520 aa27.1■■□□□ 1.93
COPS6-210ENST00000496358 NEXMIFQ5QGS0 1516 aa27.1■■□□□ 1.93
COPS6-210ENST00000496358 UBAP1LF5GYI3 381 aa27.09■■□□□ 1.93
COPS6-210ENST00000496358 ADAMTS13Q76LX8 1427 aa27.07■■□□□ 1.92
COPS6-210ENST00000496358 CHD2O14647 1828 aaKnown RBP27.06■■□□□ 1.92
COPS6-210ENST00000496358 DIP2AQ14689 1571 aa27.06■■□□□ 1.92
COPS6-210ENST00000496358 RPGRIP1LQ68CZ1 1315 aa27.05■■□□□ 1.92
COPS6-210ENST00000496358 NWD1Q149M9 1564 aa27.03■■□□□ 1.92
COPS6-210ENST00000496358 XIRP1Q702N8 1843 aaKnown RBP27.02■■□□□ 1.92
COPS6-210ENST00000496358 PPLO60437 1756 aa27.02■■□□□ 1.92
COPS6-210ENST00000496358 VGFO15240 615 aaPredicted RBP27.02■■□□□ 1.92
COPS6-210ENST00000496358 PROSER2Q86WR7 435 aaPredicted RBP27.02■■□□□ 1.92
COPS6-210ENST00000496358 NRXN3Q9Y4C0 1643 aa27.01■■□□□ 1.92
COPS6-210ENST00000496358 SETBP1Q9Y6X0 1596 aa27.01■■□□□ 1.92
COPS6-210ENST00000496358 TOM1O60784 492 aa27.01■■□□□ 1.91
COPS6-210ENST00000496358 RGL3Q3MIN7 710 aa27.01■■□□□ 1.91
COPS6-210ENST00000496358 NKTRP30414 1462 aaKnown RBP27■■□□□ 1.91
COPS6-210ENST00000496358 PIK3R4Q99570 1358 aa26.98■■□□□ 1.91
COPS6-210ENST00000496358 SPATA31E1Q6ZUB1 1445 aa26.98■■□□□ 1.91
COPS6-210ENST00000496358 TMEM94Q12767 1356 aa26.97■■□□□ 1.91
COPS6-210ENST00000496358 SCAF1Q9H7N4 1312 aaKnown RBP26.95■■□□□ 1.91
COPS6-210ENST00000496358 ANKRD30BQ9BXX2 1392 aa26.95■■□□□ 1.9
COPS6-210ENST00000496358 PIP4K2BP78356 416 aa26.94■■□□□ 1.9
COPS6-210ENST00000496358 RBM33Q96EV2 1170 aaKnown RBP26.94■■□□□ 1.9
COPS6-210ENST00000496358 AMOTL2Q9Y2J4 779 aa26.92■■□□□ 1.9
COPS6-210ENST00000496358 IFT172Q9UG01 1749 aa26.92■■□□□ 1.9
COPS6-210ENST00000496358 PTPRUQ92729 1446 aa26.9■■□□□ 1.9
COPS6-210ENST00000496358 METP08581 1390 aa26.9■■□□□ 1.9
COPS6-210ENST00000496358 ALKQ9UM73 1620 aa26.88■■□□□ 1.89
COPS6-210ENST00000496358 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
COPS6-210ENST00000496358 ADGRF5Q8IZF2 1346 aa26.87■■□□□ 1.89
COPS6-210ENST00000496358 SETD1AO15047 1707 aaKnown RBP26.85■■□□□ 1.89
COPS6-210ENST00000496358 XRN1Q8IZH2 1706 aaKnown RBP26.85■■□□□ 1.89
COPS6-210ENST00000496358 MSH6P52701 1360 aa26.84■■□□□ 1.89
COPS6-210ENST00000496358 C14orf37Q86TY3 774 aa26.84■■□□□ 1.89
COPS6-210ENST00000496358 NCOA3Q9Y6Q9 1424 aa26.82■■□□□ 1.88
COPS6-210ENST00000496358 PIK3C2GO75747 1445 aa26.76■■□□□ 1.87
COPS6-210ENST00000496358 MYOM2P54296 1465 aa26.75■■□□□ 1.87
COPS6-210ENST00000496358 C19orf44Q9H6X5 657 aa26.75■■□□□ 1.87
COPS6-210ENST00000496358 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.75■■□□□ 1.87
COPS6-210ENST00000496358 HSPA1LP34931 641 aa26.74■■□□□ 1.87
COPS6-210ENST00000496358 DCAF11Q8TEB1 546 aa26.72■■□□□ 1.87
COPS6-210ENST00000496358 KDM2AQ9Y2K7 1162 aa26.72■■□□□ 1.87
COPS6-210ENST00000496358 NRXN1Q9ULB1 1477 aa26.72■■□□□ 1.87
COPS6-210ENST00000496358 ATF3P18847 181 aa26.71■■□□□ 1.87
COPS6-210ENST00000496358 SLAIN2Q9P270 581 aa26.71■■□□□ 1.87
COPS6-210ENST00000496358 MED1Q15648 1581 aaPredicted RBP26.71■■□□□ 1.87
COPS6-210ENST00000496358 CADPS2Q86UW7 1296 aa26.7■■□□□ 1.86
COPS6-210ENST00000496358 PTCH1Q13635 1447 aa26.7■■□□□ 1.86
COPS6-210ENST00000496358 FAM135BQ49AJ0 1406 aa26.69■■□□□ 1.86
COPS6-210ENST00000496358 TMEM132EQ6IEE7 984 aa26.69■■□□□ 1.86
COPS6-210ENST00000496358 C14orf93Q9H972 538 aaKnown RBP26.69■■□□□ 1.86
COPS6-210ENST00000496358 PHF23Q9BUL5 403 aaPredicted RBP26.68■■□□□ 1.86
COPS6-210ENST00000496358 STK26Q9P289 416 aa26.68■■□□□ 1.86
COPS6-210ENST00000496358 ROBO1Q9Y6N7 1651 aa26.68■■□□□ 1.86
COPS6-210ENST00000496358 ROBO2Q9HCK4 1378 aa26.68■■□□□ 1.86
COPS6-210ENST00000496358 LAMC1P11047 1609 aa26.68■■□□□ 1.86
COPS6-210ENST00000496358 CFAP70Q5T0N1 1121 aa26.67■■□□□ 1.86
COPS6-210ENST00000496358 STAC3Q96MF2 364 aa26.67■■□□□ 1.86
COPS6-210ENST00000496358 PRAG1Q86YV5 1406 aa26.66■■□□□ 1.86
COPS6-210ENST00000496358 ASXL1Q8IXJ9 1541 aa26.65■■□□□ 1.86
COPS6-210ENST00000496358 DHX57Q6P158 1386 aaKnown RBP26.65■■□□□ 1.86
COPS6-210ENST00000496358 NALCNQ8IZF0 1738 aa26.65■■□□□ 1.86
COPS6-210ENST00000496358 ADGRL3Q9HAR2 1447 aa26.65■■□□□ 1.86
COPS6-210ENST00000496358 LRPPRCP42704 1394 aaKnown RBP26.64■■□□□ 1.86
COPS6-210ENST00000496358 DCCP43146 1447 aa26.64■■□□□ 1.85
COPS6-210ENST00000496358 YTHDC2Q9H6S0 1430 aaKnown RBP26.62■■□□□ 1.85
COPS6-210ENST00000496358 KNDC1Q76NI1 1749 aa26.62■■□□□ 1.85
COPS6-210ENST00000496358 ABCC11Q96J66 1382 aa26.61■■□□□ 1.85
COPS6-210ENST00000496358 TECPR2O15040 1411 aa26.6■■□□□ 1.85
COPS6-210ENST00000496358 SIN3AQ96ST3 1273 aa26.58■■□□□ 1.85
COPS6-210ENST00000496358 WAPLQ7Z5K2 1190 aa26.57■■□□□ 1.84
COPS6-210ENST00000496358 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
COPS6-210ENST00000496358 MST1RQ04912 1400 aa26.54■■□□□ 1.84
COPS6-210ENST00000496358 PHLPP1O60346 1717 aa26.53■■□□□ 1.84
COPS6-210ENST00000496358 SIRT1Q96EB6 747 aa26.52■■□□□ 1.84
COPS6-210ENST00000496358 ADGRB1O14514 1584 aa26.51■■□□□ 1.83
COPS6-210ENST00000496358 PLEKHH1Q9ULM0 1364 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms