RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 NUTM2DQ5VT03 806 aaPredicted RBP21.71■■□□□ 1.07
PDAP1-204ENST00000496335 BCANQ96GW7 911 aa21.71■■□□□ 1.07
PDAP1-204ENST00000496335 SLC4A1APQ9BWU0 796 aaKnown RBP21.7■■□□□ 1.06
PDAP1-204ENST00000496335 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
PDAP1-204ENST00000496335 HDGFP51858 240 aaKnown RBP21.68■■□□□ 1.06
PDAP1-204ENST00000496335 LRRC7Q96NW7 1537 aa21.68■■□□□ 1.06
PDAP1-204ENST00000496335 CLTCL1P53675 1640 aa21.67■■□□□ 1.06
PDAP1-204ENST00000496335 TRPM2O94759 1503 aa21.66■■□□□ 1.06
PDAP1-204ENST00000496335 PLEKHG1Q9ULL1 1385 aa21.66■■□□□ 1.06
PDAP1-204ENST00000496335 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.66■■□□□ 1.06
PDAP1-204ENST00000496335 FOXD1Q16676 465 aa21.64■■□□□ 1.05
PDAP1-204ENST00000496335 KCNA6P17658 529 aa21.62■■□□□ 1.05
PDAP1-204ENST00000496335 ZNF326Q5BKZ1 582 aaKnown RBP21.62■■□□□ 1.05
PDAP1-204ENST00000496335 SETD5Q9C0A6 1442 aa21.62■■□□□ 1.05
PDAP1-204ENST00000496335 KIF1BO60333 1816 aa21.61■■□□□ 1.05
PDAP1-204ENST00000496335 XIRP1Q702N8 1843 aaKnown RBP21.61■■□□□ 1.05
PDAP1-204ENST00000496335 TOM1O60784 492 aa21.6■■□□□ 1.05
PDAP1-204ENST00000496335 MPHOSPH9Q99550 1183 aa21.6■■□□□ 1.05
PDAP1-204ENST00000496335 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
PDAP1-204ENST00000496335 PIP4K2BP78356 416 aa21.59■■□□□ 1.05
PDAP1-204ENST00000496335 ADAMTS13Q76LX8 1427 aa21.57■■□□□ 1.04
PDAP1-204ENST00000496335 RBM33Q96EV2 1170 aaKnown RBP21.57■■□□□ 1.04
PDAP1-204ENST00000496335 TBX22Q9Y458 520 aa21.57■■□□□ 1.04
PDAP1-204ENST00000496335 ALKQ9UM73 1620 aa21.57■■□□□ 1.04
PDAP1-204ENST00000496335 CHD2O14647 1828 aaKnown RBP21.57■■□□□ 1.04
PDAP1-204ENST00000496335 PROSER2Q86WR7 435 aaPredicted RBP21.56■■□□□ 1.04
PDAP1-204ENST00000496335 RAB3GAP2Q9H2M9 1393 aa21.55■■□□□ 1.04
PDAP1-204ENST00000496335 NWD1Q149M9 1564 aa21.55■■□□□ 1.04
PDAP1-204ENST00000496335 TMEM94Q12767 1356 aa21.54■■□□□ 1.04
PDAP1-204ENST00000496335 NEXMIFQ5QGS0 1516 aa21.54■■□□□ 1.04
PDAP1-204ENST00000496335 NRXN3Q9Y4C0 1643 aa21.51■■□□□ 1.03
PDAP1-204ENST00000496335 DIP2AQ14689 1571 aa21.51■■□□□ 1.03
PDAP1-204ENST00000496335 NKTRP30414 1462 aaKnown RBP21.51■■□□□ 1.03
PDAP1-204ENST00000496335 ACIN1Q9UKV3 1341 aaKnown RBP21.5■■□□□ 1.03
PDAP1-204ENST00000496335 SETBP1Q9Y6X0 1596 aa21.48■■□□□ 1.03
PDAP1-204ENST00000496335 CCDC144AA2RUR9 1427 aa21.48■■□□□ 1.03
PDAP1-204ENST00000496335 HSPA1LP34931 641 aa21.47■■□□□ 1.03
PDAP1-204ENST00000496335 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
PDAP1-204ENST00000496335 PIK3R4Q99570 1358 aa21.46■■□□□ 1.03
PDAP1-204ENST00000496335 AMOTL2Q9Y2J4 779 aa21.45■■□□□ 1.02
PDAP1-204ENST00000496335 PPLO60437 1756 aa21.44■■□□□ 1.02
PDAP1-204ENST00000496335 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
PDAP1-204ENST00000496335 RGL3Q3MIN7 710 aa21.44■■□□□ 1.02
PDAP1-204ENST00000496335 RPGRIP1LQ68CZ1 1315 aa21.44■■□□□ 1.02
PDAP1-204ENST00000496335 METP08581 1390 aa21.44■■□□□ 1.02
PDAP1-204ENST00000496335 SPATA31E1Q6ZUB1 1445 aa21.41■■□□□ 1.02
PDAP1-204ENST00000496335 MSH6P52701 1360 aa21.4■■□□□ 1.02
PDAP1-204ENST00000496335 XRN1Q8IZH2 1706 aaKnown RBP21.39■■□□□ 1.01
PDAP1-204ENST00000496335 HRCP23327 699 aa21.39■■□□□ 1.01
PDAP1-204ENST00000496335 C14orf37Q86TY3 774 aa21.39■■□□□ 1.01
PDAP1-204ENST00000496335 ADGRF5Q8IZF2 1346 aa21.36■■□□□ 1.01
PDAP1-204ENST00000496335 SETD1AO15047 1707 aaKnown RBP21.36■■□□□ 1.01
PDAP1-204ENST00000496335 NCOA3Q9Y6Q9 1424 aa21.36■■□□□ 1.01
PDAP1-204ENST00000496335 IFT172Q9UG01 1749 aa21.35■■□□□ 1.01
PDAP1-204ENST00000496335 FAM135BQ49AJ0 1406 aa21.34■■□□□ 1.01
PDAP1-204ENST00000496335 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.34■■□□□ 1.01
PDAP1-204ENST00000496335 C19orf44Q9H6X5 657 aa21.33■■□□□ 1.01
PDAP1-204ENST00000496335 SLAIN2Q9P270 581 aa21.33■■□□□ 1.01
PDAP1-204ENST00000496335 ANKRD30BQ9BXX2 1392 aa21.33■■□□□ 1
PDAP1-204ENST00000496335 ROBO1Q9Y6N7 1651 aa21.32■■□□□ 1
PDAP1-204ENST00000496335 DISP3Q9P2K9 1392 aa21.32■■□□□ 1
PDAP1-204ENST00000496335 ATF3P18847 181 aa21.28■■□□□ 1
PDAP1-204ENST00000496335 CADPS2Q86UW7 1296 aa21.27■■□□□ 1
PDAP1-204ENST00000496335 ROBO2Q9HCK4 1378 aa21.26■□□□□ 0.99
PDAP1-204ENST00000496335 PIK3C2GO75747 1445 aa21.24■□□□□ 0.99
PDAP1-204ENST00000496335 NALCNQ8IZF0 1738 aa21.24■□□□□ 0.99
PDAP1-204ENST00000496335 PTCH1Q13635 1447 aa21.23■□□□□ 0.99
PDAP1-204ENST00000496335 TMEM132EQ6IEE7 984 aa21.23■□□□□ 0.99
PDAP1-204ENST00000496335 ADGRL3Q9HAR2 1447 aa21.22■□□□□ 0.99
PDAP1-204ENST00000496335 STK26Q9P289 416 aa21.22■□□□□ 0.99
PDAP1-204ENST00000496335 DCCP43146 1447 aa21.21■□□□□ 0.99
PDAP1-204ENST00000496335 MED1Q15648 1581 aaPredicted RBP21.21■□□□□ 0.99
PDAP1-204ENST00000496335 MYOM2P54296 1465 aa21.2■□□□□ 0.98
PDAP1-204ENST00000496335 ASXL1Q8IXJ9 1541 aa21.2■□□□□ 0.98
PDAP1-204ENST00000496335 PHLPP1O60346 1717 aa21.2■□□□□ 0.98
PDAP1-204ENST00000496335 PRAG1Q86YV5 1406 aa21.2■□□□□ 0.98
PDAP1-204ENST00000496335 NRXN1Q9ULB1 1477 aa21.2■□□□□ 0.98
PDAP1-204ENST00000496335 CFAP70Q5T0N1 1121 aa21.19■□□□□ 0.98
PDAP1-204ENST00000496335 C14orf93Q9H972 538 aaKnown RBP21.18■□□□□ 0.98
PDAP1-204ENST00000496335 KDM2AQ9Y2K7 1162 aa21.18■□□□□ 0.98
PDAP1-204ENST00000496335 MST1RQ04912 1400 aa21.18■□□□□ 0.98
PDAP1-204ENST00000496335 BRINP3Q76B58 766 aa21.17■□□□□ 0.98
PDAP1-204ENST00000496335 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
PDAP1-204ENST00000496335 LRPPRCP42704 1394 aaKnown RBP21.17■□□□□ 0.98
PDAP1-204ENST00000496335 ILDR2Q71H61 639 aa21.16■□□□□ 0.98
PDAP1-204ENST00000496335 WAPLQ7Z5K2 1190 aa21.15■□□□□ 0.98
PDAP1-204ENST00000496335 TECPR2O15040 1411 aa21.14■□□□□ 0.98
PDAP1-204ENST00000496335 YTHDC2Q9H6S0 1430 aaKnown RBP21.14■□□□□ 0.98
PDAP1-204ENST00000496335 ABCC11Q96J66 1382 aa21.14■□□□□ 0.98
PDAP1-204ENST00000496335 DHX57Q6P158 1386 aaKnown RBP21.13■□□□□ 0.97
PDAP1-204ENST00000496335 LAMC1P11047 1609 aa21.13■□□□□ 0.97
PDAP1-204ENST00000496335 COL16A1Q07092 1604 aaPredicted RBP21.13■□□□□ 0.97
PDAP1-204ENST00000496335 KNDC1Q76NI1 1749 aa21.12■□□□□ 0.97
PDAP1-204ENST00000496335 AHDC1Q5TGY3 1603 aaPredicted RBP21.11■□□□□ 0.97
PDAP1-204ENST00000496335 PLEKHH1Q9ULM0 1364 aa21.11■□□□□ 0.97
PDAP1-204ENST00000496335 C1orf167Q5SNV9 1468 aa21.09■□□□□ 0.97
PDAP1-204ENST00000496335 DDX17Q92841 729 aaKnown RBP21.08■□□□□ 0.97
PDAP1-204ENST00000496335 JCADQ9P266 1359 aa21.08■□□□□ 0.96
PDAP1-204ENST00000496335 ORAI2Q96SN7 254 aa21.07■□□□□ 0.96
PDAP1-204ENST00000496335 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms