RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
THBS3-208ENST00000496332 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
THBS3-208ENST00000496332 PPP1R15AO75807 674 aaPredicted RBP17.81■□□□□ 0.44
THBS3-208ENST00000496332 PIP4K2BP78356 416 aa17.8■□□□□ 0.44
THBS3-208ENST00000496332 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
THBS3-208ENST00000496332 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.79■□□□□ 0.44
THBS3-208ENST00000496332 MYO5BQ9ULV0 1848 aa17.79■□□□□ 0.44
THBS3-208ENST00000496332 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
THBS3-208ENST00000496332 KCNA6P17658 529 aa17.78■□□□□ 0.44
THBS3-208ENST00000496332 NUTM2DQ5VT03 806 aaPredicted RBP17.78■□□□□ 0.44
THBS3-208ENST00000496332 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
THBS3-208ENST00000496332 SPHKAPQ2M3C7 1700 aa17.75■□□□□ 0.43
THBS3-208ENST00000496332 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
THBS3-208ENST00000496332 PROSER2Q86WR7 435 aaPredicted RBP17.73■□□□□ 0.43
THBS3-208ENST00000496332 TBX22Q9Y458 520 aa17.73■□□□□ 0.43
THBS3-208ENST00000496332 ALKQ9UM73 1620 aa17.72■□□□□ 0.43
THBS3-208ENST00000496332 TRPM2O94759 1503 aa17.72■□□□□ 0.43
THBS3-208ENST00000496332 TMEM94Q12767 1356 aa17.71■□□□□ 0.43
THBS3-208ENST00000496332 HSPA1LP34931 641 aa17.71■□□□□ 0.43
THBS3-208ENST00000496332 RBM33Q96EV2 1170 aaKnown RBP17.71■□□□□ 0.43
THBS3-208ENST00000496332 CLTCL1P53675 1640 aa17.69■□□□□ 0.42
THBS3-208ENST00000496332 ADAMTS13Q76LX8 1427 aa17.69■□□□□ 0.42
THBS3-208ENST00000496332 NWD1Q149M9 1564 aa17.68■□□□□ 0.42
THBS3-208ENST00000496332 NKTRP30414 1462 aaKnown RBP17.68■□□□□ 0.42
THBS3-208ENST00000496332 FOXD1Q16676 465 aa17.67■□□□□ 0.42
THBS3-208ENST00000496332 XIRP1Q702N8 1843 aaKnown RBP17.67■□□□□ 0.42
THBS3-208ENST00000496332 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
THBS3-208ENST00000496332 DIP2AQ14689 1571 aa17.65■□□□□ 0.42
THBS3-208ENST00000496332 DISP3Q9P2K9 1392 aa17.65■□□□□ 0.42
THBS3-208ENST00000496332 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.42
THBS3-208ENST00000496332 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
THBS3-208ENST00000496332 CHD2O14647 1828 aaKnown RBP17.63■□□□□ 0.41
THBS3-208ENST00000496332 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
THBS3-208ENST00000496332 KIF1BO60333 1816 aa17.61■□□□□ 0.41
THBS3-208ENST00000496332 AMOTL2Q9Y2J4 779 aa17.61■□□□□ 0.41
THBS3-208ENST00000496332 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
THBS3-208ENST00000496332 MSH6P52701 1360 aa17.61■□□□□ 0.41
THBS3-208ENST00000496332 SETBP1Q9Y6X0 1596 aa17.61■□□□□ 0.41
THBS3-208ENST00000496332 PTPRUQ92729 1446 aa17.6■□□□□ 0.41
THBS3-208ENST00000496332 NRXN3Q9Y4C0 1643 aa17.59■□□□□ 0.41
THBS3-208ENST00000496332 RPGRIP1LQ68CZ1 1315 aa17.59■□□□□ 0.41
THBS3-208ENST00000496332 VGFO15240 615 aaPredicted RBP17.59■□□□□ 0.41
THBS3-208ENST00000496332 FAM135BQ49AJ0 1406 aa17.58■□□□□ 0.41
THBS3-208ENST00000496332 METP08581 1390 aa17.58■□□□□ 0.4
THBS3-208ENST00000496332 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
THBS3-208ENST00000496332 CCDC144AA2RUR9 1427 aa17.57■□□□□ 0.4
THBS3-208ENST00000496332 NCOA3Q9Y6Q9 1424 aa17.57■□□□□ 0.4
THBS3-208ENST00000496332 RAB3GAP2Q9H2M9 1393 aa17.57■□□□□ 0.4
THBS3-208ENST00000496332 SLAIN2Q9P270 581 aa17.56■□□□□ 0.4
THBS3-208ENST00000496332 RGL3Q3MIN7 710 aa17.54■□□□□ 0.4
THBS3-208ENST00000496332 C19orf44Q9H6X5 657 aa17.54■□□□□ 0.4
THBS3-208ENST00000496332 ATF3P18847 181 aa17.51■□□□□ 0.39
THBS3-208ENST00000496332 SPATA31E1Q6ZUB1 1445 aa17.51■□□□□ 0.39
THBS3-208ENST00000496332 ILDR2Q71H61 639 aa17.51■□□□□ 0.39
THBS3-208ENST00000496332 CADPS2Q86UW7 1296 aa17.51■□□□□ 0.39
THBS3-208ENST00000496332 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
THBS3-208ENST00000496332 ROBO1Q9Y6N7 1651 aa17.5■□□□□ 0.39
THBS3-208ENST00000496332 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
THBS3-208ENST00000496332 PPLO60437 1756 aa17.48■□□□□ 0.39
THBS3-208ENST00000496332 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
THBS3-208ENST00000496332 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.47■□□□□ 0.39
THBS3-208ENST00000496332 HRCP23327 699 aa17.47■□□□□ 0.39
THBS3-208ENST00000496332 ANKRD30BQ9BXX2 1392 aa17.46■□□□□ 0.39
THBS3-208ENST00000496332 SETD1AO15047 1707 aaKnown RBP17.44■□□□□ 0.38
THBS3-208ENST00000496332 ROBO2Q9HCK4 1378 aa17.43■□□□□ 0.38
THBS3-208ENST00000496332 DCCP43146 1447 aa17.43■□□□□ 0.38
THBS3-208ENST00000496332 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
THBS3-208ENST00000496332 ADGRL3Q9HAR2 1447 aa17.42■□□□□ 0.38
THBS3-208ENST00000496332 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
THBS3-208ENST00000496332 BRINP3Q76B58 766 aa17.4■□□□□ 0.38
THBS3-208ENST00000496332 IFT172Q9UG01 1749 aa17.4■□□□□ 0.38
THBS3-208ENST00000496332 MST1RQ04912 1400 aa17.39■□□□□ 0.38
THBS3-208ENST00000496332 PRAG1Q86YV5 1406 aa17.39■□□□□ 0.38
THBS3-208ENST00000496332 PHLPP1O60346 1717 aa17.39■□□□□ 0.37
THBS3-208ENST00000496332 TMEM132EQ6IEE7 984 aa17.39■□□□□ 0.37
THBS3-208ENST00000496332 STK26Q9P289 416 aa17.39■□□□□ 0.37
THBS3-208ENST00000496332 PIK3C2GO75747 1445 aa17.38■□□□□ 0.37
THBS3-208ENST00000496332 NALCNQ8IZF0 1738 aa17.37■□□□□ 0.37
THBS3-208ENST00000496332 JCADQ9P266 1359 aa17.37■□□□□ 0.37
THBS3-208ENST00000496332 C14orf93Q9H972 538 aaKnown RBP17.36■□□□□ 0.37
THBS3-208ENST00000496332 LRPPRCP42704 1394 aaKnown RBP17.36■□□□□ 0.37
THBS3-208ENST00000496332 COL16A1Q07092 1604 aaPredicted RBP17.35■□□□□ 0.37
THBS3-208ENST00000496332 AHDC1Q5TGY3 1603 aaPredicted RBP17.35■□□□□ 0.37
THBS3-208ENST00000496332 SOCS7O14512 581 aa17.34■□□□□ 0.37
THBS3-208ENST00000496332 MYOM2P54296 1465 aa17.34■□□□□ 0.37
THBS3-208ENST00000496332 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
THBS3-208ENST00000496332 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
THBS3-208ENST00000496332 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
THBS3-208ENST00000496332 ABCC11Q96J66 1382 aa17.34■□□□□ 0.37
THBS3-208ENST00000496332 NRXN1Q9ULB1 1477 aa17.34■□□□□ 0.37
THBS3-208ENST00000496332 C1orf167Q5SNV9 1468 aa17.32■□□□□ 0.36
THBS3-208ENST00000496332 TECPR2O15040 1411 aa17.32■□□□□ 0.36
THBS3-208ENST00000496332 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
THBS3-208ENST00000496332 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
THBS3-208ENST00000496332 RGS17Q9UGC6 210 aaPredicted RBP17.31■□□□□ 0.36
THBS3-208ENST00000496332 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
THBS3-208ENST00000496332 DDX17Q92841 729 aaKnown RBP17.3■□□□□ 0.36
THBS3-208ENST00000496332 ORAI2Q96SN7 254 aa17.3■□□□□ 0.36
THBS3-208ENST00000496332 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
THBS3-208ENST00000496332 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms