RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 CLTCL1P53675 1640 aa17.69■□□□□ 0.42
HLA-DQA1-207ENST00000496318 ZFYVE9O95405 1425 aa17.68■□□□□ 0.42
HLA-DQA1-207ENST00000496318 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
HLA-DQA1-207ENST00000496318 CHD2O14647 1828 aaKnown RBP17.68■□□□□ 0.42
HLA-DQA1-207ENST00000496318 RIMS2Q9UQ26 1411 aa17.67■□□□□ 0.42
HLA-DQA1-207ENST00000496318 EID1Q9Y6B2 187 aa17.67■□□□□ 0.42
HLA-DQA1-207ENST00000496318 RBM33Q96EV2 1170 aaKnown RBP17.66■□□□□ 0.42
HLA-DQA1-207ENST00000496318 KIF1BO60333 1816 aa17.65■□□□□ 0.42
HLA-DQA1-207ENST00000496318 SLC52A1Q9NWF4 448 aa17.64■□□□□ 0.41
HLA-DQA1-207ENST00000496318 NWD1Q149M9 1564 aa17.63■□□□□ 0.41
HLA-DQA1-207ENST00000496318 NRXN3Q9Y4C0 1643 aa17.61■□□□□ 0.41
HLA-DQA1-207ENST00000496318 BCANQ96GW7 911 aa17.61■□□□□ 0.41
HLA-DQA1-207ENST00000496318 HFM1A2PYH4 1435 aa17.61■□□□□ 0.41
HLA-DQA1-207ENST00000496318 HSPA1LP34931 641 aa17.6■□□□□ 0.41
HLA-DQA1-207ENST00000496318 TRPM2O94759 1503 aa17.59■□□□□ 0.41
HLA-DQA1-207ENST00000496318 DISP3Q9P2K9 1392 aa17.58■□□□□ 0.4
HLA-DQA1-207ENST00000496318 PPP1R15AO75807 674 aaPredicted RBP17.58■□□□□ 0.4
HLA-DQA1-207ENST00000496318 PLEKHG1Q9ULL1 1385 aa17.57■□□□□ 0.4
HLA-DQA1-207ENST00000496318 TRIM52Q96A61 297 aa17.57■□□□□ 0.4
HLA-DQA1-207ENST00000496318 ADAMTS13Q76LX8 1427 aa17.56■□□□□ 0.4
HLA-DQA1-207ENST00000496318 TMEM94Q12767 1356 aa17.56■□□□□ 0.4
HLA-DQA1-207ENST00000496318 TOM1O60784 492 aa17.55■□□□□ 0.4
HLA-DQA1-207ENST00000496318 NEXMIFQ5QGS0 1516 aa17.55■□□□□ 0.4
HLA-DQA1-207ENST00000496318 ROBO1Q9Y6N7 1651 aa17.55■□□□□ 0.4
HLA-DQA1-207ENST00000496318 FOXD1Q16676 465 aa17.54■□□□□ 0.4
HLA-DQA1-207ENST00000496318 PPLO60437 1756 aa17.53■□□□□ 0.4
HLA-DQA1-207ENST00000496318 MED1Q15648 1581 aaPredicted RBP17.53■□□□□ 0.4
HLA-DQA1-207ENST00000496318 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.4
HLA-DQA1-207ENST00000496318 KCNA6P17658 529 aa17.52■□□□□ 0.4
HLA-DQA1-207ENST00000496318 ILDR2Q71H61 639 aa17.52■□□□□ 0.4
HLA-DQA1-207ENST00000496318 SETD1AO15047 1707 aaKnown RBP17.52■□□□□ 0.39
HLA-DQA1-207ENST00000496318 DIP2AQ14689 1571 aa17.51■□□□□ 0.39
HLA-DQA1-207ENST00000496318 PROSER2Q86WR7 435 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQA1-207ENST00000496318 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
HLA-DQA1-207ENST00000496318 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQA1-207ENST00000496318 PTPRUQ92729 1446 aa17.5■□□□□ 0.39
HLA-DQA1-207ENST00000496318 ZNF326Q5BKZ1 582 aaKnown RBP17.5■□□□□ 0.39
HLA-DQA1-207ENST00000496318 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
HLA-DQA1-207ENST00000496318 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
HLA-DQA1-207ENST00000496318 IFT172Q9UG01 1749 aa17.47■□□□□ 0.39
HLA-DQA1-207ENST00000496318 NALCNQ8IZF0 1738 aa17.45■□□□□ 0.38
HLA-DQA1-207ENST00000496318 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
HLA-DQA1-207ENST00000496318 PHLPP1O60346 1717 aa17.44■□□□□ 0.38
HLA-DQA1-207ENST00000496318 METP08581 1390 aa17.43■□□□□ 0.38
HLA-DQA1-207ENST00000496318 TBX22Q9Y458 520 aa17.43■□□□□ 0.38
HLA-DQA1-207ENST00000496318 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
HLA-DQA1-207ENST00000496318 MSH6P52701 1360 aa17.4■□□□□ 0.38
HLA-DQA1-207ENST00000496318 AMOTL2Q9Y2J4 779 aa17.39■□□□□ 0.37
HLA-DQA1-207ENST00000496318 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
HLA-DQA1-207ENST00000496318 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
HLA-DQA1-207ENST00000496318 RAB3GAP2Q9H2M9 1393 aa17.38■□□□□ 0.37
HLA-DQA1-207ENST00000496318 MPHOSPH9Q99550 1183 aa17.37■□□□□ 0.37
HLA-DQA1-207ENST00000496318 COL16A1Q07092 1604 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQA1-207ENST00000496318 FAM135BQ49AJ0 1406 aa17.36■□□□□ 0.37
HLA-DQA1-207ENST00000496318 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
HLA-DQA1-207ENST00000496318 CCDC144AA2RUR9 1427 aa17.34■□□□□ 0.37
HLA-DQA1-207ENST00000496318 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
HLA-DQA1-207ENST00000496318 ASXL1Q8IXJ9 1541 aa17.33■□□□□ 0.37
HLA-DQA1-207ENST00000496318 SPATA31E1Q6ZUB1 1445 aa17.33■□□□□ 0.36
HLA-DQA1-207ENST00000496318 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
HLA-DQA1-207ENST00000496318 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
HLA-DQA1-207ENST00000496318 NHSL1Q5SYE7 1610 aa17.29■□□□□ 0.36
HLA-DQA1-207ENST00000496318 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
HLA-DQA1-207ENST00000496318 ADGRL3Q9HAR2 1447 aa17.28■□□□□ 0.36
HLA-DQA1-207ENST00000496318 AHDC1Q5TGY3 1603 aaPredicted RBP17.28■□□□□ 0.36
HLA-DQA1-207ENST00000496318 MST1RQ04912 1400 aa17.27■□□□□ 0.35
HLA-DQA1-207ENST00000496318 NCOA3Q9Y6Q9 1424 aa17.27■□□□□ 0.35
HLA-DQA1-207ENST00000496318 ATF3P18847 181 aa17.26■□□□□ 0.35
HLA-DQA1-207ENST00000496318 C19orf44Q9H6X5 657 aa17.26■□□□□ 0.35
HLA-DQA1-207ENST00000496318 KNDC1Q76NI1 1749 aa17.26■□□□□ 0.35
HLA-DQA1-207ENST00000496318 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQA1-207ENST00000496318 VGFO15240 615 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQA1-207ENST00000496318 DDX17Q92841 729 aaKnown RBP17.25■□□□□ 0.35
HLA-DQA1-207ENST00000496318 SHPRHQ149N8 1683 aa17.25■□□□□ 0.35
HLA-DQA1-207ENST00000496318 PTCH1Q13635 1447 aa17.24■□□□□ 0.35
HLA-DQA1-207ENST00000496318 LRP6O75581 1613 aa17.24■□□□□ 0.35
HLA-DQA1-207ENST00000496318 RPGRIP1LQ68CZ1 1315 aa17.23■□□□□ 0.35
HLA-DQA1-207ENST00000496318 BRINP3Q76B58 766 aa17.23■□□□□ 0.35
HLA-DQA1-207ENST00000496318 CADPS2Q86UW7 1296 aa17.23■□□□□ 0.35
HLA-DQA1-207ENST00000496318 RGS17Q9UGC6 210 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQA1-207ENST00000496318 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
HLA-DQA1-207ENST00000496318 DCCP43146 1447 aa17.22■□□□□ 0.35
HLA-DQA1-207ENST00000496318 TMEM132EQ6IEE7 984 aa17.22■□□□□ 0.35
HLA-DQA1-207ENST00000496318 STK26Q9P289 416 aa17.22■□□□□ 0.35
HLA-DQA1-207ENST00000496318 SOCS7O14512 581 aa17.21■□□□□ 0.35
HLA-DQA1-207ENST00000496318 PLEKHH1Q9ULM0 1364 aa17.2■□□□□ 0.34
HLA-DQA1-207ENST00000496318 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
HLA-DQA1-207ENST00000496318 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
HLA-DQA1-207ENST00000496318 LAMC1P11047 1609 aa17.18■□□□□ 0.34
HLA-DQA1-207ENST00000496318 JCADQ9P266 1359 aa17.17■□□□□ 0.34
HLA-DQA1-207ENST00000496318 WAPLQ7Z5K2 1190 aa17.17■□□□□ 0.34
HLA-DQA1-207ENST00000496318 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
HLA-DQA1-207ENST00000496318 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
HLA-DQA1-207ENST00000496318 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
HLA-DQA1-207ENST00000496318 CDC42BPGQ6DT37 1551 aa17.16■□□□□ 0.34
HLA-DQA1-207ENST00000496318 MYOM2P54296 1465 aa17.16■□□□□ 0.34
HLA-DQA1-207ENST00000496318 NUTM2FA1L443 756 aa17.14■□□□□ 0.33
HLA-DQA1-207ENST00000496318 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
HLA-DQA1-207ENST00000496318 POTEAQ6S8J7 498 aa17.14■□□□□ 0.33
HLA-DQA1-207ENST00000496318 ORAI2Q96SN7 254 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms