RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 HDGFP51858 240 aaKnown RBP22.43■■□□□ 1.18
RAPGEF3-215ENST00000495953 ZNF335Q9H4Z2 1342 aaPredicted RBP22.42■■□□□ 1.18
RAPGEF3-215ENST00000495953 SIN3AQ96ST3 1273 aa22.42■■□□□ 1.18
RAPGEF3-215ENST00000495953 ARHGAP23Q9P227 1491 aa22.41■■□□□ 1.18
RAPGEF3-215ENST00000495953 TMEM2Q9UHN6 1383 aa22.41■■□□□ 1.18
RAPGEF3-215ENST00000495953 ZNF326Q5BKZ1 582 aaKnown RBP22.4■■□□□ 1.18
RAPGEF3-215ENST00000495953 NEUROD1Q13562 356 aa22.39■■□□□ 1.17
RAPGEF3-215ENST00000495953 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.39■■□□□ 1.17
RAPGEF3-215ENST00000495953 IQGAP1P46940 1657 aa22.39■■□□□ 1.17
RAPGEF3-215ENST00000495953 STAC3Q96MF2 364 aa22.38■■□□□ 1.17
RAPGEF3-215ENST00000495953 PPLO60437 1756 aa22.38■■□□□ 1.17
RAPGEF3-215ENST00000495953 RGL3Q3MIN7 710 aa22.37■■□□□ 1.17
RAPGEF3-215ENST00000495953 EID1Q9Y6B2 187 aa22.37■■□□□ 1.17
RAPGEF3-215ENST00000495953 ZFYVE9O95405 1425 aa22.37■■□□□ 1.17
RAPGEF3-215ENST00000495953 RIMS2Q9UQ26 1411 aa22.37■■□□□ 1.17
RAPGEF3-215ENST00000495953 IFT172Q9UG01 1749 aa22.37■■□□□ 1.17
RAPGEF3-215ENST00000495953 NEXMIFQ5QGS0 1516 aa22.36■■□□□ 1.17
RAPGEF3-215ENST00000495953 ANKLE2Q86XL3 938 aa22.35■■□□□ 1.17
RAPGEF3-215ENST00000495953 TIMELESSQ9UNS1 1208 aa22.35■■□□□ 1.17
RAPGEF3-215ENST00000495953 STRCP1A6NGW2 1772 aa22.35■■□□□ 1.17
RAPGEF3-215ENST00000495953 IQSEC2Q5JU85 1478 aa22.34■■□□□ 1.17
RAPGEF3-215ENST00000495953 NPHP4O75161 1426 aaPredicted RBP22.34■■□□□ 1.17
RAPGEF3-215ENST00000495953 VGFO15240 615 aaPredicted RBP22.33■■□□□ 1.17
RAPGEF3-215ENST00000495953 MED14O60244 1454 aa22.33■■□□□ 1.16
RAPGEF3-215ENST00000495953 TXNDC2Q86VQ3 553 aa22.32■■□□□ 1.16
RAPGEF3-215ENST00000495953 TONSLQ96HA7 1378 aa22.32■■□□□ 1.16
RAPGEF3-215ENST00000495953 SCAF11Q99590 1463 aaKnown RBP22.32■■□□□ 1.16
RAPGEF3-215ENST00000495953 LTKP29376 864 aa22.31■■□□□ 1.16
RAPGEF3-215ENST00000495953 MYOM2P54296 1465 aa22.29■■□□□ 1.16
RAPGEF3-215ENST00000495953 PPP1R15AO75807 674 aaPredicted RBP22.29■■□□□ 1.16
RAPGEF3-215ENST00000495953 DCAF11Q8TEB1 546 aa22.28■■□□□ 1.16
RAPGEF3-215ENST00000495953 L3MBTL2Q969R5 705 aa22.28■■□□□ 1.16
RAPGEF3-215ENST00000495953 PLEKHG1Q9ULL1 1385 aa22.27■■□□□ 1.16
RAPGEF3-215ENST00000495953 NRXN1Q9ULB1 1477 aa22.24■■□□□ 1.15
RAPGEF3-215ENST00000495953 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
RAPGEF3-215ENST00000495953 NUTM2DQ5VT03 806 aaPredicted RBP22.23■■□□□ 1.15
RAPGEF3-215ENST00000495953 SETBP1Q9Y6X0 1596 aa22.22■■□□□ 1.15
RAPGEF3-215ENST00000495953 KDM2AQ9Y2K7 1162 aa22.22■■□□□ 1.15
RAPGEF3-215ENST00000495953 ADGRF5Q8IZF2 1346 aa22.21■■□□□ 1.15
RAPGEF3-215ENST00000495953 PIK3C2GO75747 1445 aa22.2■■□□□ 1.14
RAPGEF3-215ENST00000495953 UBAP1LF5GYI3 381 aa22.19■■□□□ 1.14
RAPGEF3-215ENST00000495953 DIP2AQ14689 1571 aa22.19■■□□□ 1.14
RAPGEF3-215ENST00000495953 LAMC1P11047 1609 aa22.18■■□□□ 1.14
RAPGEF3-215ENST00000495953 NRXN3Q9Y4C0 1643 aa22.17■■□□□ 1.14
RAPGEF3-215ENST00000495953 CPS1P31327 1500 aa22.17■■□□□ 1.14
RAPGEF3-215ENST00000495953 BCANQ96GW7 911 aa22.17■■□□□ 1.14
RAPGEF3-215ENST00000495953 XIRP1Q702N8 1843 aaKnown RBP22.17■■□□□ 1.14
RAPGEF3-215ENST00000495953 KIAA1210Q9ULL0 1709 aa22.17■■□□□ 1.14
RAPGEF3-215ENST00000495953 PRAG1Q86YV5 1406 aa22.16■■□□□ 1.14
RAPGEF3-215ENST00000495953 TBX22Q9Y458 520 aa22.16■■□□□ 1.14
RAPGEF3-215ENST00000495953 ADAMTS13Q76LX8 1427 aa22.14■■□□□ 1.14
RAPGEF3-215ENST00000495953 ALKQ9UM73 1620 aa22.14■■□□□ 1.14
RAPGEF3-215ENST00000495953 C14orf93Q9H972 538 aaKnown RBP22.14■■□□□ 1.13
RAPGEF3-215ENST00000495953 LRRC7Q96NW7 1537 aa22.12■■□□□ 1.13
RAPGEF3-215ENST00000495953 SETD1AO15047 1707 aaKnown RBP22.12■■□□□ 1.13
RAPGEF3-215ENST00000495953 SLC26A8Q96RN1 970 aa22.11■■□□□ 1.13
RAPGEF3-215ENST00000495953 PIK3R4Q99570 1358 aa22.11■■□□□ 1.13
RAPGEF3-215ENST00000495953 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
RAPGEF3-215ENST00000495953 ZEB1P37275 1124 aaPredicted RBP22.08■■□□□ 1.13
RAPGEF3-215ENST00000495953 DISP3Q9P2K9 1392 aa22.08■■□□□ 1.12
RAPGEF3-215ENST00000495953 NBPF8Q3BBV2 869 aa22.07■■□□□ 1.12
RAPGEF3-215ENST00000495953 CFAP70Q5T0N1 1121 aa22.07■■□□□ 1.12
RAPGEF3-215ENST00000495953 CHD2O14647 1828 aaKnown RBP22.06■■□□□ 1.12
RAPGEF3-215ENST00000495953 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
RAPGEF3-215ENST00000495953 RALGAPBQ86X10 1494 aa22.03■■□□□ 1.12
RAPGEF3-215ENST00000495953 METP08581 1390 aa22.03■■□□□ 1.12
RAPGEF3-215ENST00000495953 TOM1O60784 492 aa22.03■■□□□ 1.12
RAPGEF3-215ENST00000495953 ADGRB1O14514 1584 aa22.03■■□□□ 1.12
RAPGEF3-215ENST00000495953 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
RAPGEF3-215ENST00000495953 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
RAPGEF3-215ENST00000495953 RBM33Q96EV2 1170 aaKnown RBP22.02■■□□□ 1.12
RAPGEF3-215ENST00000495953 KCNA6P17658 529 aa22.01■■□□□ 1.11
RAPGEF3-215ENST00000495953 ASXL1Q8IXJ9 1541 aa22.01■■□□□ 1.11
RAPGEF3-215ENST00000495953 GPRASP1Q5JY77 1395 aa22■■□□□ 1.11
RAPGEF3-215ENST00000495953 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
RAPGEF3-215ENST00000495953 KNDC1Q76NI1 1749 aa21.99■■□□□ 1.11
RAPGEF3-215ENST00000495953 XRN1Q8IZH2 1706 aaKnown RBP21.99■■□□□ 1.11
RAPGEF3-215ENST00000495953 LRPPRCP42704 1394 aaKnown RBP21.99■■□□□ 1.11
RAPGEF3-215ENST00000495953 YTHDC2Q9H6S0 1430 aaKnown RBP21.98■■□□□ 1.11
RAPGEF3-215ENST00000495953 NBPF1Q3BBV0 1214 aa21.98■■□□□ 1.11
RAPGEF3-215ENST00000495953 TMEM132EQ6IEE7 984 aa21.98■■□□□ 1.11
RAPGEF3-215ENST00000495953 ABCC11Q96J66 1382 aa21.98■■□□□ 1.11
RAPGEF3-215ENST00000495953 PTPRUQ92729 1446 aa21.97■■□□□ 1.11
RAPGEF3-215ENST00000495953 AMOTL2Q9Y2J4 779 aa21.97■■□□□ 1.11
RAPGEF3-215ENST00000495953 TECPR2O15040 1411 aa21.96■■□□□ 1.11
RAPGEF3-215ENST00000495953 NKTRP30414 1462 aaKnown RBP21.96■■□□□ 1.11
RAPGEF3-215ENST00000495953 HSPA1LP34931 641 aa21.95■■□□□ 1.1
RAPGEF3-215ENST00000495953 ILDR2Q71H61 639 aa21.95■■□□□ 1.1
RAPGEF3-215ENST00000495953 SIRT1Q96EB6 747 aa21.95■■□□□ 1.1
RAPGEF3-215ENST00000495953 TMEM94Q12767 1356 aa21.95■■□□□ 1.1
RAPGEF3-215ENST00000495953 DLC1Q96QB1 1528 aa21.95■■□□□ 1.1
RAPGEF3-215ENST00000495953 PTCH1Q13635 1447 aa21.93■■□□□ 1.1
RAPGEF3-215ENST00000495953 CARD11Q9BXL7 1154 aa21.93■■□□□ 1.1
RAPGEF3-215ENST00000495953 STK26Q9P289 416 aa21.91■■□□□ 1.1
RAPGEF3-215ENST00000495953 FAM135BQ49AJ0 1406 aa21.9■■□□□ 1.1
RAPGEF3-215ENST00000495953 ARHGEF28Q8N1W1 1705 aaKnown RBP21.89■■□□□ 1.1
RAPGEF3-215ENST00000495953 PROSER2Q86WR7 435 aaPredicted RBP21.89■■□□□ 1.09
RAPGEF3-215ENST00000495953 TRAK1Q9UPV9 953 aa21.89■■□□□ 1.09
RAPGEF3-215ENST00000495953 EIF3AQ14152 1382 aaKnown RBP21.88■■□□□ 1.09
RAPGEF3-215ENST00000495953 NCOA3Q9Y6Q9 1424 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms