RNA–Protein interactions for RNA: ENST00000495519.1

KDM5C-213, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-213ENST00000495519 TOM1O60784 492 aa17.43■□□□□ 0.38
KDM5C-213ENST00000495519 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.43■□□□□ 0.38
KDM5C-213ENST00000495519 BCANQ96GW7 911 aa17.43■□□□□ 0.38
KDM5C-213ENST00000495519 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
KDM5C-213ENST00000495519 PLEKHG1Q9ULL1 1385 aa17.42■□□□□ 0.38
KDM5C-213ENST00000495519 SLC26A8Q96RN1 970 aa17.41■□□□□ 0.38
KDM5C-213ENST00000495519 KCNA6P17658 529 aa17.39■□□□□ 0.37
KDM5C-213ENST00000495519 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
KDM5C-213ENST00000495519 TRPM2O94759 1503 aa17.38■□□□□ 0.37
KDM5C-213ENST00000495519 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
KDM5C-213ENST00000495519 PIP4K2BP78356 416 aa17.35■□□□□ 0.37
KDM5C-213ENST00000495519 NUTM2DQ5VT03 806 aaPredicted RBP17.35■□□□□ 0.37
KDM5C-213ENST00000495519 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
KDM5C-213ENST00000495519 TBX22Q9Y458 520 aa17.35■□□□□ 0.37
KDM5C-213ENST00000495519 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
KDM5C-213ENST00000495519 CLTCL1P53675 1640 aa17.35■□□□□ 0.37
KDM5C-213ENST00000495519 NKTRP30414 1462 aaKnown RBP17.34■□□□□ 0.37
KDM5C-213ENST00000495519 NWD1Q149M9 1564 aa17.34■□□□□ 0.37
KDM5C-213ENST00000495519 ZNF326Q5BKZ1 582 aaKnown RBP17.34■□□□□ 0.37
KDM5C-213ENST00000495519 DIP2AQ14689 1571 aa17.33■□□□□ 0.37
KDM5C-213ENST00000495519 TMEM94Q12767 1356 aa17.32■□□□□ 0.36
KDM5C-213ENST00000495519 PROSER2Q86WR7 435 aaPredicted RBP17.32■□□□□ 0.36
KDM5C-213ENST00000495519 ADAMTS13Q76LX8 1427 aa17.31■□□□□ 0.36
KDM5C-213ENST00000495519 ALKQ9UM73 1620 aa17.31■□□□□ 0.36
KDM5C-213ENST00000495519 KIF1BO60333 1816 aa17.31■□□□□ 0.36
KDM5C-213ENST00000495519 SETD5Q9C0A6 1442 aa17.3■□□□□ 0.36
KDM5C-213ENST00000495519 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
KDM5C-213ENST00000495519 XIRP1Q702N8 1843 aaKnown RBP17.29■□□□□ 0.36
KDM5C-213ENST00000495519 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
KDM5C-213ENST00000495519 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
KDM5C-213ENST00000495519 HSPA1LP34931 641 aa17.27■□□□□ 0.36
KDM5C-213ENST00000495519 SETBP1Q9Y6X0 1596 aa17.27■□□□□ 0.35
KDM5C-213ENST00000495519 NEXMIFQ5QGS0 1516 aa17.26■□□□□ 0.35
KDM5C-213ENST00000495519 FOXD1Q16676 465 aa17.26■□□□□ 0.35
KDM5C-213ENST00000495519 MSH6P52701 1360 aa17.25■□□□□ 0.35
KDM5C-213ENST00000495519 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
KDM5C-213ENST00000495519 CCDC144AA2RUR9 1427 aa17.24■□□□□ 0.35
KDM5C-213ENST00000495519 VGFO15240 615 aaPredicted RBP17.24■□□□□ 0.35
KDM5C-213ENST00000495519 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
KDM5C-213ENST00000495519 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
KDM5C-213ENST00000495519 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
KDM5C-213ENST00000495519 RAB3GAP2Q9H2M9 1393 aa17.23■□□□□ 0.35
KDM5C-213ENST00000495519 AMOTL2Q9Y2J4 779 aa17.22■□□□□ 0.35
KDM5C-213ENST00000495519 DISP3Q9P2K9 1392 aa17.21■□□□□ 0.35
KDM5C-213ENST00000495519 C14orf37Q86TY3 774 aa17.2■□□□□ 0.34
KDM5C-213ENST00000495519 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
KDM5C-213ENST00000495519 PTPRUQ92729 1446 aa17.2■□□□□ 0.34
KDM5C-213ENST00000495519 METP08581 1390 aa17.18■□□□□ 0.34
KDM5C-213ENST00000495519 XRN1Q8IZH2 1706 aaKnown RBP17.17■□□□□ 0.34
KDM5C-213ENST00000495519 PPLO60437 1756 aa17.17■□□□□ 0.34
KDM5C-213ENST00000495519 SPATA31E1Q6ZUB1 1445 aa17.16■□□□□ 0.34
KDM5C-213ENST00000495519 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
KDM5C-213ENST00000495519 HRCP23327 699 aa17.15■□□□□ 0.34
KDM5C-213ENST00000495519 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
KDM5C-213ENST00000495519 SLAIN2Q9P270 581 aa17.15■□□□□ 0.34
KDM5C-213ENST00000495519 ATF3P18847 181 aa17.14■□□□□ 0.33
KDM5C-213ENST00000495519 CADPS2Q86UW7 1296 aa17.14■□□□□ 0.33
KDM5C-213ENST00000495519 ANKRD30BQ9BXX2 1392 aa17.14■□□□□ 0.33
KDM5C-213ENST00000495519 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
KDM5C-213ENST00000495519 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.11■□□□□ 0.33
KDM5C-213ENST00000495519 DCCP43146 1447 aa17.11■□□□□ 0.33
KDM5C-213ENST00000495519 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
KDM5C-213ENST00000495519 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
KDM5C-213ENST00000495519 PTCH1Q13635 1447 aa17.09■□□□□ 0.33
KDM5C-213ENST00000495519 MED1Q15648 1581 aaPredicted RBP17.09■□□□□ 0.33
KDM5C-213ENST00000495519 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
KDM5C-213ENST00000495519 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
KDM5C-213ENST00000495519 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
KDM5C-213ENST00000495519 PIK3C2GO75747 1445 aa17.05■□□□□ 0.32
KDM5C-213ENST00000495519 ROBO2Q9HCK4 1378 aa17.04■□□□□ 0.32
KDM5C-213ENST00000495519 PHLPP1O60346 1717 aa17.03■□□□□ 0.32
KDM5C-213ENST00000495519 MYOM2P54296 1465 aa17.03■□□□□ 0.32
KDM5C-213ENST00000495519 NALCNQ8IZF0 1738 aa17.02■□□□□ 0.32
KDM5C-213ENST00000495519 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
KDM5C-213ENST00000495519 MST1RQ04912 1400 aa17.02■□□□□ 0.31
KDM5C-213ENST00000495519 NRXN1Q9ULB1 1477 aa17.01■□□□□ 0.31
KDM5C-213ENST00000495519 ILDR2Q71H61 639 aa17.01■□□□□ 0.31
KDM5C-213ENST00000495519 AHDC1Q5TGY3 1603 aaPredicted RBP17■□□□□ 0.31
KDM5C-213ENST00000495519 BRINP3Q76B58 766 aa17■□□□□ 0.31
KDM5C-213ENST00000495519 LRPPRCP42704 1394 aaKnown RBP17■□□□□ 0.31
KDM5C-213ENST00000495519 TECPR2O15040 1411 aa16.99■□□□□ 0.31
KDM5C-213ENST00000495519 C14orf93Q9H972 538 aaKnown RBP16.99■□□□□ 0.31
KDM5C-213ENST00000495519 ABCC11Q96J66 1382 aa16.99■□□□□ 0.31
KDM5C-213ENST00000495519 JCADQ9P266 1359 aa16.99■□□□□ 0.31
KDM5C-213ENST00000495519 COL16A1Q07092 1604 aaPredicted RBP16.99■□□□□ 0.31
KDM5C-213ENST00000495519 ASXL1Q8IXJ9 1541 aa16.98■□□□□ 0.31
KDM5C-213ENST00000495519 TMEM132EQ6IEE7 984 aa16.98■□□□□ 0.31
KDM5C-213ENST00000495519 STK26Q9P289 416 aa16.98■□□□□ 0.31
KDM5C-213ENST00000495519 LAMC1P11047 1609 aa16.98■□□□□ 0.31
KDM5C-213ENST00000495519 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
KDM5C-213ENST00000495519 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.31
KDM5C-213ENST00000495519 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.3
KDM5C-213ENST00000495519 C1orf167Q5SNV9 1468 aa16.95■□□□□ 0.3
KDM5C-213ENST00000495519 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
KDM5C-213ENST00000495519 CFAP70Q5T0N1 1121 aa16.95■□□□□ 0.3
KDM5C-213ENST00000495519 DCAF11Q8TEB1 546 aa16.94■□□□□ 0.3
KDM5C-213ENST00000495519 SIRT1Q96EB6 747 aa16.93■□□□□ 0.3
KDM5C-213ENST00000495519 CDC42BPGQ6DT37 1551 aa16.93■□□□□ 0.3
KDM5C-213ENST00000495519 WAPLQ7Z5K2 1190 aa16.92■□□□□ 0.3
KDM5C-213ENST00000495519 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms