RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 BCANQ96GW7 911 aa22.69■■□□□ 1.22
PTPN18-216ENST00000495400 PHF23Q9BUL5 403 aaPredicted RBP22.68■■□□□ 1.22
PTPN18-216ENST00000495400 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
PTPN18-216ENST00000495400 ZFYVE9O95405 1425 aa22.66■■□□□ 1.22
PTPN18-216ENST00000495400 TMEM131LA2VDJ0 1609 aa22.66■■□□□ 1.22
PTPN18-216ENST00000495400 FAM135BQ49AJ0 1406 aa22.65■■□□□ 1.22
PTPN18-216ENST00000495400 E9PCH4 1651 aa22.65■■□□□ 1.22
PTPN18-216ENST00000495400 NWD1Q149M9 1564 aa22.65■■□□□ 1.22
PTPN18-216ENST00000495400 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
PTPN18-216ENST00000495400 PLEKHG1Q9ULL1 1385 aa22.64■■□□□ 1.22
PTPN18-216ENST00000495400 NKTRP30414 1462 aaKnown RBP22.64■■□□□ 1.21
PTPN18-216ENST00000495400 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.21
PTPN18-216ENST00000495400 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
PTPN18-216ENST00000495400 CHD2O14647 1828 aaKnown RBP22.62■■□□□ 1.21
PTPN18-216ENST00000495400 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
PTPN18-216ENST00000495400 RBM33Q96EV2 1170 aaKnown RBP22.62■■□□□ 1.21
PTPN18-216ENST00000495400 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.61■■□□□ 1.21
PTPN18-216ENST00000495400 ITGAEP38570 1179 aa22.6■■□□□ 1.21
PTPN18-216ENST00000495400 NUP155O75694 1391 aa22.59■■□□□ 1.21
PTPN18-216ENST00000495400 TBX22Q9Y458 520 aa22.58■■□□□ 1.21
PTPN18-216ENST00000495400 ROBO1Q9Y6N7 1651 aa22.58■■□□□ 1.2
PTPN18-216ENST00000495400 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
PTPN18-216ENST00000495400 MSH6P52701 1360 aa22.57■■□□□ 1.2
PTPN18-216ENST00000495400 NUTM2DQ5VT03 806 aaPredicted RBP22.53■■□□□ 1.2
PTPN18-216ENST00000495400 SLAIN2Q9P270 581 aa22.52■■□□□ 1.2
PTPN18-216ENST00000495400 DIP2AQ14689 1571 aa22.51■■□□□ 1.19
PTPN18-216ENST00000495400 ADAMTS13Q76LX8 1427 aa22.51■■□□□ 1.19
PTPN18-216ENST00000495400 NCOA3Q9Y6Q9 1424 aa22.5■■□□□ 1.19
PTPN18-216ENST00000495400 RGS17Q9UGC6 210 aaPredicted RBP22.49■■□□□ 1.19
PTPN18-216ENST00000495400 PIK3R4Q99570 1358 aa22.49■■□□□ 1.19
PTPN18-216ENST00000495400 PHLPP1O60346 1717 aa22.47■■□□□ 1.19
PTPN18-216ENST00000495400 SPHKAPQ2M3C7 1700 aa22.47■■□□□ 1.19
PTPN18-216ENST00000495400 C14orf37Q86TY3 774 aa22.45■■□□□ 1.18
PTPN18-216ENST00000495400 TRPM2O94759 1503 aa22.45■■□□□ 1.18
PTPN18-216ENST00000495400 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
PTPN18-216ENST00000495400 C19orf44Q9H6X5 657 aa22.42■■□□□ 1.18
PTPN18-216ENST00000495400 AMOTL2Q9Y2J4 779 aa22.41■■□□□ 1.18
PTPN18-216ENST00000495400 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
PTPN18-216ENST00000495400 ZNF326Q5BKZ1 582 aaKnown RBP22.4■■□□□ 1.18
PTPN18-216ENST00000495400 CADPS2Q86UW7 1296 aa22.4■■□□□ 1.18
PTPN18-216ENST00000495400 PTPRUQ92729 1446 aa22.4■■□□□ 1.18
PTPN18-216ENST00000495400 JCADQ9P266 1359 aa22.38■■□□□ 1.17
PTPN18-216ENST00000495400 ATF3P18847 181 aa22.38■■□□□ 1.17
PTPN18-216ENST00000495400 NRXN3Q9Y4C0 1643 aa22.38■■□□□ 1.17
PTPN18-216ENST00000495400 COL16A1Q07092 1604 aaPredicted RBP22.37■■□□□ 1.17
PTPN18-216ENST00000495400 SETBP1Q9Y6X0 1596 aa22.37■■□□□ 1.17
PTPN18-216ENST00000495400 POTEAQ6S8J7 498 aa22.36■■□□□ 1.17
PTPN18-216ENST00000495400 NAIPQ13075 1403 aa22.36■■□□□ 1.17
PTPN18-216ENST00000495400 CLTCL1P53675 1640 aa22.35■■□□□ 1.17
PTPN18-216ENST00000495400 KIF1BO60333 1816 aa22.34■■□□□ 1.17
PTPN18-216ENST00000495400 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
PTPN18-216ENST00000495400 AHDC1Q5TGY3 1603 aaPredicted RBP22.32■■□□□ 1.16
PTPN18-216ENST00000495400 NEXMIFQ5QGS0 1516 aa22.31■■□□□ 1.16
PTPN18-216ENST00000495400 DCCP43146 1447 aa22.31■■□□□ 1.16
PTPN18-216ENST00000495400 METP08581 1390 aa22.3■■□□□ 1.16
PTPN18-216ENST00000495400 SPATA31A6Q5VVP1 1343 aa22.29■■□□□ 1.16
PTPN18-216ENST00000495400 BRINP3Q76B58 766 aa22.28■■□□□ 1.16
PTPN18-216ENST00000495400 TRIM52Q96A61 297 aa22.28■■□□□ 1.16
PTPN18-216ENST00000495400 SHPRHQ149N8 1683 aa22.26■■□□□ 1.15
PTPN18-216ENST00000495400 HFM1A2PYH4 1435 aa22.26■■□□□ 1.15
PTPN18-216ENST00000495400 LRP6O75581 1613 aa22.24■■□□□ 1.15
PTPN18-216ENST00000495400 MST1RQ04912 1400 aa22.23■■□□□ 1.15
PTPN18-216ENST00000495400 MEX3CQ5U5Q3 659 aaKnown RBP22.23■■□□□ 1.15
PTPN18-216ENST00000495400 VGFO15240 615 aaPredicted RBP22.22■■□□□ 1.15
PTPN18-216ENST00000495400 SLC4A1APQ9BWU0 796 aaKnown RBP22.22■■□□□ 1.15
PTPN18-216ENST00000495400 ASXL1Q8IXJ9 1541 aa22.21■■□□□ 1.15
PTPN18-216ENST00000495400 ADGRL3Q9HAR2 1447 aa22.21■■□□□ 1.15
PTPN18-216ENST00000495400 RPGRIP1LQ68CZ1 1315 aa22.2■■□□□ 1.14
PTPN18-216ENST00000495400 NALCNQ8IZF0 1738 aa22.2■■□□□ 1.14
PTPN18-216ENST00000495400 NHSL1Q5SYE7 1610 aa22.19■■□□□ 1.14
PTPN18-216ENST00000495400 SETD1AO15047 1707 aaKnown RBP22.17■■□□□ 1.14
PTPN18-216ENST00000495400 ZNF772Q68DY9 489 aaPredicted RBP22.17■■□□□ 1.14
PTPN18-216ENST00000495400 SETD5Q9C0A6 1442 aa22.16■■□□□ 1.14
PTPN18-216ENST00000495400 PPLO60437 1756 aa22.16■■□□□ 1.14
PTPN18-216ENST00000495400 NUTM2BA6NNL0 878 aaPredicted RBP22.15■■□□□ 1.14
PTPN18-216ENST00000495400 NUTM2EB1AL46 878 aaPredicted RBP22.15■■□□□ 1.14
PTPN18-216ENST00000495400 NUTM2AQ8IVF1 878 aaPredicted RBP22.15■■□□□ 1.14
PTPN18-216ENST00000495400 LRRC59Q96AG4 307 aaKnown RBP22.15■■□□□ 1.14
PTPN18-216ENST00000495400 PTCH1Q13635 1447 aa22.14■■□□□ 1.14
PTPN18-216ENST00000495400 C1orf167Q5SNV9 1468 aa22.11■■□□□ 1.13
PTPN18-216ENST00000495400 DDX17Q92841 729 aaKnown RBP22.11■■□□□ 1.13
PTPN18-216ENST00000495400 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
PTPN18-216ENST00000495400 FOXD1Q16676 465 aa22.1■■□□□ 1.13
PTPN18-216ENST00000495400 PRAG1Q86YV5 1406 aa22.1■■□□□ 1.13
PTPN18-216ENST00000495400 PNPLA6Q8IY17 1366 aa22.07■■□□□ 1.12
PTPN18-216ENST00000495400 RXRBP28702 533 aa22.06■■□□□ 1.12
PTPN18-216ENST00000495400 LAMC1P11047 1609 aa22.06■■□□□ 1.12
PTPN18-216ENST00000495400 CCDC144AA2RUR9 1427 aa22.06■■□□□ 1.12
PTPN18-216ENST00000495400 AFF2P51816 1311 aa22.06■■□□□ 1.12
PTPN18-216ENST00000495400 ORAI2Q96SN7 254 aa22.05■■□□□ 1.12
PTPN18-216ENST00000495400 MPHOSPH9Q99550 1183 aa22.04■■□□□ 1.12
PTPN18-216ENST00000495400 ADGRF5Q8IZF2 1346 aa22.03■■□□□ 1.12
PTPN18-216ENST00000495400 RGL3Q3MIN7 710 aa22.02■■□□□ 1.12
PTPN18-216ENST00000495400 IFT172Q9UG01 1749 aa22.01■■□□□ 1.11
PTPN18-216ENST00000495400 SOS2Q07890 1332 aaPredicted RBP22.01■■□□□ 1.11
PTPN18-216ENST00000495400 SPATA31E1Q6ZUB1 1445 aa22■■□□□ 1.11
PTPN18-216ENST00000495400 C8orf37Q96NL8 207 aa22■■□□□ 1.11
PTPN18-216ENST00000495400 CDK12Q9NYV4 1490 aaPredicted RBP22■■□□□ 1.11
PTPN18-216ENST00000495400 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
PTPN18-216ENST00000495400 UPF1Q92900 1129 aaKnown RBP eCLIP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms