RNA–Protein interactions for RNA: ENST00000494989.1

EPHA1-206, Transcript of EPH receptor A1, humanhuman

TSL 3

Gene EPHA1, Length 753 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-206ENST00000494989 STRCP1A6NGW2 1772 aa15.72■□□□□ 0.11
EPHA1-206ENST00000494989 KIF1BO60333 1816 aa15.71■□□□□ 0.11
EPHA1-206ENST00000494989 FOXD1Q16676 465 aa15.71■□□□□ 0.11
EPHA1-206ENST00000494989 TXNDC2Q86VQ3 553 aa15.71■□□□□ 0.11
EPHA1-206ENST00000494989 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
EPHA1-206ENST00000494989 TOM1O60784 492 aa15.7■□□□□ 0.1
EPHA1-206ENST00000494989 ZFYVE9O95405 1425 aa15.69■□□□□ 0.1
EPHA1-206ENST00000494989 CHGAP10645 457 aaKnown RBP15.69■□□□□ 0.1
EPHA1-206ENST00000494989 MPHOSPH9Q99550 1183 aa15.68■□□□□ 0.1
EPHA1-206ENST00000494989 PIP4K2BP78356 416 aa15.67■□□□□ 0.1
EPHA1-206ENST00000494989 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
EPHA1-206ENST00000494989 RIMS2Q9UQ26 1411 aa15.67■□□□□ 0.1
EPHA1-206ENST00000494989 EID1Q9Y6B2 187 aa15.66■□□□□ 0.1
EPHA1-206ENST00000494989 NUTM2DQ5VT03 806 aaPredicted RBP15.65■□□□□ 0.1
EPHA1-206ENST00000494989 HSPA1LP34931 641 aa15.64■□□□□ 0.09
EPHA1-206ENST00000494989 MED1Q15648 1581 aaPredicted RBP15.62■□□□□ 0.09
EPHA1-206ENST00000494989 NEXMIFQ5QGS0 1516 aa15.61■□□□□ 0.09
EPHA1-206ENST00000494989 XIRP1Q702N8 1843 aaKnown RBP15.61■□□□□ 0.09
EPHA1-206ENST00000494989 PPLO60437 1756 aa15.6■□□□□ 0.09
EPHA1-206ENST00000494989 SLC26A8Q96RN1 970 aa15.6■□□□□ 0.09
EPHA1-206ENST00000494989 NRXN3Q9Y4C0 1643 aa15.6■□□□□ 0.09
EPHA1-206ENST00000494989 PLEKHG1Q9ULL1 1385 aa15.6■□□□□ 0.09
EPHA1-206ENST00000494989 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
EPHA1-206ENST00000494989 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.08
EPHA1-206ENST00000494989 ZNF326Q5BKZ1 582 aaKnown RBP15.58■□□□□ 0.08
EPHA1-206ENST00000494989 IFT172Q9UG01 1749 aa15.57■□□□□ 0.08
EPHA1-206ENST00000494989 HRCP23327 699 aa15.57■□□□□ 0.08
EPHA1-206ENST00000494989 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
EPHA1-206ENST00000494989 BCANQ96GW7 911 aa15.56■□□□□ 0.08
EPHA1-206ENST00000494989 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
EPHA1-206ENST00000494989 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
EPHA1-206ENST00000494989 ADAMTS13Q76LX8 1427 aa15.56■□□□□ 0.08
EPHA1-206ENST00000494989 ALKQ9UM73 1620 aa15.54■□□□□ 0.08
EPHA1-206ENST00000494989 NWD1Q149M9 1564 aa15.54■□□□□ 0.08
EPHA1-206ENST00000494989 LRRC7Q96NW7 1537 aa15.54■□□□□ 0.08
EPHA1-206ENST00000494989 SPATA31E1Q6ZUB1 1445 aa15.54■□□□□ 0.08
EPHA1-206ENST00000494989 HDGFP51858 240 aaKnown RBP15.54■□□□□ 0.08
EPHA1-206ENST00000494989 PHF23Q9BUL5 403 aaPredicted RBP15.54■□□□□ 0.08
EPHA1-206ENST00000494989 SETBP1Q9Y6X0 1596 aa15.53■□□□□ 0.08
EPHA1-206ENST00000494989 SETD1AO15047 1707 aaKnown RBP15.53■□□□□ 0.08
EPHA1-206ENST00000494989 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
EPHA1-206ENST00000494989 ANKRD30BQ9BXX2 1392 aa15.52■□□□□ 0.08
EPHA1-206ENST00000494989 RGL3Q3MIN7 710 aa15.51■□□□□ 0.07
EPHA1-206ENST00000494989 TBX22Q9Y458 520 aa15.5■□□□□ 0.07
EPHA1-206ENST00000494989 KCNA6P17658 529 aa15.49■□□□□ 0.07
EPHA1-206ENST00000494989 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
EPHA1-206ENST00000494989 PTPRUQ92729 1446 aa15.49■□□□□ 0.07
EPHA1-206ENST00000494989 RBM33Q96EV2 1170 aaKnown RBP15.48■□□□□ 0.07
EPHA1-206ENST00000494989 XRN1Q8IZH2 1706 aaKnown RBP15.47■□□□□ 0.07
EPHA1-206ENST00000494989 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.07
EPHA1-206ENST00000494989 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
EPHA1-206ENST00000494989 METP08581 1390 aa15.46■□□□□ 0.07
EPHA1-206ENST00000494989 ADGRF5Q8IZF2 1346 aa15.45■□□□□ 0.06
EPHA1-206ENST00000494989 VGFO15240 615 aaPredicted RBP15.44■□□□□ 0.06
EPHA1-206ENST00000494989 PROSER2Q86WR7 435 aaPredicted RBP15.44■□□□□ 0.06
EPHA1-206ENST00000494989 TMEM94Q12767 1356 aa15.44■□□□□ 0.06
EPHA1-206ENST00000494989 PIK3R4Q99570 1358 aa15.43■□□□□ 0.06
EPHA1-206ENST00000494989 AMOTL2Q9Y2J4 779 aa15.41■□□□□ 0.06
EPHA1-206ENST00000494989 ASXL1Q8IXJ9 1541 aa15.4■□□□□ 0.06
EPHA1-206ENST00000494989 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.4■□□□□ 0.06
EPHA1-206ENST00000494989 PIK3C2GO75747 1445 aa15.39■□□□□ 0.05
EPHA1-206ENST00000494989 MYOM2P54296 1465 aa15.39■□□□□ 0.05
EPHA1-206ENST00000494989 NRXN1Q9ULB1 1477 aa15.39■□□□□ 0.05
EPHA1-206ENST00000494989 DHX57Q6P158 1386 aaKnown RBP15.37■□□□□ 0.05
EPHA1-206ENST00000494989 NALCNQ8IZF0 1738 aa15.37■□□□□ 0.05
EPHA1-206ENST00000494989 FAM135BQ49AJ0 1406 aa15.36■□□□□ 0.05
EPHA1-206ENST00000494989 ROBO1Q9Y6N7 1651 aa15.35■□□□□ 0.05
EPHA1-206ENST00000494989 KDM2AQ9Y2K7 1162 aa15.35■□□□□ 0.05
EPHA1-206ENST00000494989 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
EPHA1-206ENST00000494989 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
EPHA1-206ENST00000494989 LAMC1P11047 1609 aa15.34■□□□□ 0.05
EPHA1-206ENST00000494989 ROBO2Q9HCK4 1378 aa15.34■□□□□ 0.05
EPHA1-206ENST00000494989 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
EPHA1-206ENST00000494989 CFAP70Q5T0N1 1121 aa15.33■□□□□ 0.04
EPHA1-206ENST00000494989 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.04
EPHA1-206ENST00000494989 MSH6P52701 1360 aa15.33■□□□□ 0.04
EPHA1-206ENST00000494989 RGS17Q9UGC6 210 aaPredicted RBP15.32■□□□□ 0.04
EPHA1-206ENST00000494989 NCOA3Q9Y6Q9 1424 aa15.32■□□□□ 0.04
EPHA1-206ENST00000494989 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
EPHA1-206ENST00000494989 C14orf93Q9H972 538 aaKnown RBP15.31■□□□□ 0.04
EPHA1-206ENST00000494989 PTCH1Q13635 1447 aa15.31■□□□□ 0.04
EPHA1-206ENST00000494989 PRAG1Q86YV5 1406 aa15.31■□□□□ 0.04
EPHA1-206ENST00000494989 STK26Q9P289 416 aa15.3■□□□□ 0.04
EPHA1-206ENST00000494989 PHLPP1O60346 1717 aa15.29■□□□□ 0.04
EPHA1-206ENST00000494989 LRPPRCP42704 1394 aaKnown RBP15.29■□□□□ 0.04
EPHA1-206ENST00000494989 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
EPHA1-206ENST00000494989 ADGRB1O14514 1584 aa15.28■□□□□ 0.04
EPHA1-206ENST00000494989 YTHDC2Q9H6S0 1430 aaKnown RBP15.28■□□□□ 0.04
EPHA1-206ENST00000494989 ADGRL3Q9HAR2 1447 aa15.28■□□□□ 0.04
EPHA1-206ENST00000494989 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
EPHA1-206ENST00000494989 C19orf44Q9H6X5 657 aa15.28■□□□□ 0.04
EPHA1-206ENST00000494989 TECPR2O15040 1411 aa15.27■□□□□ 0.04
EPHA1-206ENST00000494989 PLEKHH1Q9ULM0 1364 aa15.27■□□□□ 0.04
EPHA1-206ENST00000494989 ABCC11Q96J66 1382 aa15.26■□□□□ 0.03
EPHA1-206ENST00000494989 WAPLQ7Z5K2 1190 aa15.26■□□□□ 0.03
EPHA1-206ENST00000494989 SLAIN2Q9P270 581 aa15.26■□□□□ 0.03
EPHA1-206ENST00000494989 KIAA1210Q9ULL0 1709 aa15.26■□□□□ 0.03
EPHA1-206ENST00000494989 L3MBTL2Q969R5 705 aa15.25■□□□□ 0.03
EPHA1-206ENST00000494989 DCCP43146 1447 aa15.25■□□□□ 0.03
EPHA1-206ENST00000494989 ATF3P18847 181 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms