RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 SLC34A2O95436 690 aa3.68□□□□□ -1.82
MDC1-208ENST00000494654 HOXB1P14653 301 aaPredicted RBP3.68□□□□□ -1.82
MDC1-208ENST00000494654 MLLT3P42568 568 aaPredicted RBP3.68□□□□□ -1.82
MDC1-208ENST00000494654 DOK7Q18PE1 504 aa3.68□□□□□ -1.82
MDC1-208ENST00000494654 ZNF710Q8N1W2 664 aa3.68□□□□□ -1.82
MDC1-208ENST00000494654 WDR70Q9NW82 654 aa3.68□□□□□ -1.82
MDC1-208ENST00000494654 TIMELESSQ9UNS1 1208 aa3.68□□□□□ -1.82
MDC1-208ENST00000494654 ZBED9Q6R2W3 1325 aa3.68□□□□□ -1.82
MDC1-208ENST00000494654 FANCD2Q9BXW9 1451 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 BCORL1Q5H9F3 1711 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 EFCAB5A4FU69 1503 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 URB2Q14146 1524 aaKnown RBP3.67□□□□□ -1.82
MDC1-208ENST00000494654 POTEMA6NI47 508 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 SEMA3EO15041 775 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 EVI5O60447 810 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 NEFMP07197 916 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 POTEGQ6S5H5 508 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 VSIG10Q8N0Z9 540 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 SETD5Q9C0A6 1442 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 KDM5CP41229 1560 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 MYO5CQ9NQX4 1742 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 CCDC18Q5T9S5 1454 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 ARHGAP35Q9NRY4 1499 aa3.67□□□□□ -1.82
MDC1-208ENST00000494654 ZMYM4Q5VZL5 1548 aa3.66□□□□□ -1.82
MDC1-208ENST00000494654 EMP3P54852 163 aa3.66□□□□□ -1.82
MDC1-208ENST00000494654 MAP3K9P80192 1104 aa3.66□□□□□ -1.82
MDC1-208ENST00000494654 VARS2Q5ST30 1063 aaKnown RBP3.66□□□□□ -1.82
MDC1-208ENST00000494654 DDX12PQ92771 950 aa3.66□□□□□ -1.82
MDC1-208ENST00000494654 TRIM52Q96A61 297 aa3.66□□□□□ -1.82
MDC1-208ENST00000494654 HS3ST6Q96QI5 342 aa3.66□□□□□ -1.82
MDC1-208ENST00000494654 AXIN2Q9Y2T1 843 aa3.66□□□□□ -1.82
MDC1-208ENST00000494654 RNF123Q5XPI4 1314 aa3.66□□□□□ -1.82
MDC1-208ENST00000494654 CENPJQ9HC77 1338 aaPredicted RBP3.66□□□□□ -1.82
MDC1-208ENST00000494654 LRRC9Q6ZRR7 1453 aa3.66□□□□□ -1.82
MDC1-208ENST00000494654 CUL7Q14999 1698 aa3.65□□□□□ -1.82
MDC1-208ENST00000494654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.65□□□□□ -1.82
MDC1-208ENST00000494654 CCDC144AA2RUR9 1427 aa3.65□□□□□ -1.83
MDC1-208ENST00000494654 SNPHO15079 494 aa3.65□□□□□ -1.83
MDC1-208ENST00000494654 RRP9O43818 475 aaKnown RBP3.65□□□□□ -1.83
MDC1-208ENST00000494654 FYCO1Q9BQS8 1478 aa3.65□□□□□ -1.83
MDC1-208ENST00000494654 PLXNC1O60486 1568 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 NCOA1Q15788 1441 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 AKNAQ7Z591 1439 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 UACAQ9BZF9 1416 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 LAMC1P11047 1609 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 GRXCR2A6NFK2 248 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 HNRNPUQ00839 825 aaKnown RBP eCLIP3.64□□□□□ -1.83
MDC1-208ENST00000494654 DDRGK1Q96HY6 314 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 ADAM33Q9BZ11 813 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 ZMYND15Q9H091 742 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 BRPF3Q9ULD4 1205 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 PCDHGA10Q9Y5H3 936 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 AQRO60306 1485 aaKnown RBP eCLIP3.64□□□□□ -1.83
MDC1-208ENST00000494654 ERBB3P21860 1342 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 CLASP1Q7Z460 1538 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 EHBP1L1Q8N3D4 1523 aa3.64□□□□□ -1.83
MDC1-208ENST00000494654 CFAP65Q6ZU64 1925 aaKnown RBP3.64□□□□□ -1.83
MDC1-208ENST00000494654 EIF4G3O43432 1585 aaKnown RBP3.63□□□□□ -1.83
MDC1-208ENST00000494654 PLEKHH2Q8IVE3 1493 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 RIMBP2O15034 1052 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 UBTFP17480 764 aaKnown RBP3.63□□□□□ -1.83
MDC1-208ENST00000494654 PSEN2P49810 448 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 IRX6P78412 446 aaPredicted RBP3.63□□□□□ -1.83
MDC1-208ENST00000494654 DDX10Q13206 875 aaKnown RBP3.63□□□□□ -1.83
MDC1-208ENST00000494654 PDIA6Q15084 440 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 TSR1Q2NL82 804 aaKnown RBP3.63□□□□□ -1.83
MDC1-208ENST00000494654 B4GALNT3Q6L9W6 998 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 RBM33Q96EV2 1170 aaKnown RBP3.63□□□□□ -1.83
MDC1-208ENST00000494654 KRTAP3-3Q9BYR6 98 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 KRTAP3-2Q9BYR7 98 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 CDHR5Q9HBB8 845 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 ZSWIM6Q9HCJ5 1215 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 SAMD9Q5K651 1589 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 CEP170Q5SW79 1584 aa3.63□□□□□ -1.83
MDC1-208ENST00000494654 COL9A1P20849 921 aa3.62□□□□□ -1.83
MDC1-208ENST00000494654 OSBPP22059 807 aa3.62□□□□□ -1.83
MDC1-208ENST00000494654 FOSBP53539 338 aa3.62□□□□□ -1.83
MDC1-208ENST00000494654 AAMPQ13685 434 aa3.62□□□□□ -1.83
MDC1-208ENST00000494654 DMRTA1Q5VZB9 504 aa3.62□□□□□ -1.83
MDC1-208ENST00000494654 ZNF454Q8N9F8 522 aa3.62□□□□□ -1.83
MDC1-208ENST00000494654 ARHGEF1Q92888 912 aaKnown RBP3.62□□□□□ -1.83
MDC1-208ENST00000494654 ARIH1Q9Y4X5 557 aaPredicted RBP3.62□□□□□ -1.83
MDC1-208ENST00000494654 TONSLQ96HA7 1378 aa3.62□□□□□ -1.83
MDC1-208ENST00000494654 HFM1A2PYH4 1435 aa3.61□□□□□ -1.83
MDC1-208ENST00000494654 TEX14Q8IWB6 1497 aa3.61□□□□□ -1.83
MDC1-208ENST00000494654 TCERG1O14776 1098 aaKnown RBP3.61□□□□□ -1.83
MDC1-208ENST00000494654 MS4A1P11836 297 aa3.61□□□□□ -1.83
MDC1-208ENST00000494654 CALD1Q05682 793 aaKnown RBP3.61□□□□□ -1.83
MDC1-208ENST00000494654 RBM26Q5T8P6 1007 aaKnown RBP3.61□□□□□ -1.83
MDC1-208ENST00000494654 CDAN1Q8IWY9 1227 aa3.61□□□□□ -1.83
MDC1-208ENST00000494654 DNMT1P26358 1616 aaKnown RBP3.61□□□□□ -1.83
MDC1-208ENST00000494654 SCAPERQ9BY12 1400 aa3.61□□□□□ -1.83
MDC1-208ENST00000494654 MBD5Q9P267 1494 aa3.6□□□□□ -1.83
MDC1-208ENST00000494654 AK9Q5TCS8 1911 aa3.6□□□□□ -1.83
MDC1-208ENST00000494654 KDM6BO15054 1643 aa3.6□□□□□ -1.83
MDC1-208ENST00000494654 TRPM1Q7Z4N2 1603 aa3.6□□□□□ -1.83
MDC1-208ENST00000494654 RNF17Q9BXT8 1623 aaKnown RBP3.6□□□□□ -1.83
MDC1-208ENST00000494654 TESPA1A2RU30 521 aaPredicted RBP3.6□□□□□ -1.83
MDC1-208ENST00000494654 C3orf80F5H4A9 247 aa3.6□□□□□ -1.83
MDC1-208ENST00000494654 TBC1D12O60347 775 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms