RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
CTDSP1-212ENST00000494067 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
CTDSP1-212ENST00000494067 NAIPQ13075 1403 aa20.44■□□□□ 0.86
CTDSP1-212ENST00000494067 SLC26A8Q96RN1 970 aa20.44■□□□□ 0.86
CTDSP1-212ENST00000494067 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
CTDSP1-212ENST00000494067 HSPA1LP34931 641 aa20.42■□□□□ 0.86
CTDSP1-212ENST00000494067 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
CTDSP1-212ENST00000494067 CHD2O14647 1828 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-212ENST00000494067 ILDR2Q71H61 639 aa20.4■□□□□ 0.86
CTDSP1-212ENST00000494067 BCANQ96GW7 911 aa20.4■□□□□ 0.86
CTDSP1-212ENST00000494067 PLEKHG1Q9ULL1 1385 aa20.39■□□□□ 0.85
CTDSP1-212ENST00000494067 CLTCL1P53675 1640 aa20.38■□□□□ 0.85
CTDSP1-212ENST00000494067 NUTM2DQ5VT03 806 aaPredicted RBP20.37■□□□□ 0.85
CTDSP1-212ENST00000494067 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
CTDSP1-212ENST00000494067 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
CTDSP1-212ENST00000494067 TMEM94Q12767 1356 aa20.35■□□□□ 0.85
CTDSP1-212ENST00000494067 NRXN3Q9Y4C0 1643 aa20.35■□□□□ 0.85
CTDSP1-212ENST00000494067 CHGAP10645 457 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-212ENST00000494067 KCNA6P17658 529 aa20.35■□□□□ 0.85
CTDSP1-212ENST00000494067 HFM1A2PYH4 1435 aa20.35■□□□□ 0.85
CTDSP1-212ENST00000494067 NKTRP30414 1462 aaKnown RBP20.34■□□□□ 0.85
CTDSP1-212ENST00000494067 MED1Q15648 1581 aaPredicted RBP20.34■□□□□ 0.85
CTDSP1-212ENST00000494067 PPP1R15AO75807 674 aaPredicted RBP20.33■□□□□ 0.85
CTDSP1-212ENST00000494067 TRPM2O94759 1503 aa20.32■□□□□ 0.84
CTDSP1-212ENST00000494067 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTDSP1-212ENST00000494067 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
CTDSP1-212ENST00000494067 NEXMIFQ5QGS0 1516 aa20.28■□□□□ 0.84
CTDSP1-212ENST00000494067 ROBO1Q9Y6N7 1651 aa20.28■□□□□ 0.84
CTDSP1-212ENST00000494067 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
CTDSP1-212ENST00000494067 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.84
CTDSP1-212ENST00000494067 SETBP1Q9Y6X0 1596 aa20.26■□□□□ 0.83
CTDSP1-212ENST00000494067 TBX22Q9Y458 520 aa20.26■□□□□ 0.83
CTDSP1-212ENST00000494067 KIF1BO60333 1816 aa20.25■□□□□ 0.83
CTDSP1-212ENST00000494067 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
CTDSP1-212ENST00000494067 FAM135BQ49AJ0 1406 aa20.21■□□□□ 0.83
CTDSP1-212ENST00000494067 SETD1AO15047 1707 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-212ENST00000494067 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.21■□□□□ 0.83
CTDSP1-212ENST00000494067 SOCS7O14512 581 aa20.2■□□□□ 0.82
CTDSP1-212ENST00000494067 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
CTDSP1-212ENST00000494067 FOXD1Q16676 465 aa20.18■□□□□ 0.82
CTDSP1-212ENST00000494067 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
CTDSP1-212ENST00000494067 METP08581 1390 aa20.18■□□□□ 0.82
CTDSP1-212ENST00000494067 PIK3R4Q99570 1358 aa20.18■□□□□ 0.82
CTDSP1-212ENST00000494067 MSH6P52701 1360 aa20.17■□□□□ 0.82
CTDSP1-212ENST00000494067 PPLO60437 1756 aa20.16■□□□□ 0.82
CTDSP1-212ENST00000494067 ZNF326Q5BKZ1 582 aaKnown RBP20.16■□□□□ 0.82
CTDSP1-212ENST00000494067 SLC4A1APQ9BWU0 796 aaKnown RBP20.15■□□□□ 0.82
CTDSP1-212ENST00000494067 C14orf37Q86TY3 774 aa20.14■□□□□ 0.81
CTDSP1-212ENST00000494067 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.81
CTDSP1-212ENST00000494067 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
CTDSP1-212ENST00000494067 NCOA3Q9Y6Q9 1424 aa20.13■□□□□ 0.81
CTDSP1-212ENST00000494067 NALCNQ8IZF0 1738 aa20.12■□□□□ 0.81
CTDSP1-212ENST00000494067 COL16A1Q07092 1604 aaPredicted RBP20.12■□□□□ 0.81
CTDSP1-212ENST00000494067 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
CTDSP1-212ENST00000494067 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
CTDSP1-212ENST00000494067 SPATA31E1Q6ZUB1 1445 aa20.06■□□□□ 0.8
CTDSP1-212ENST00000494067 ATF3P18847 181 aa20.05■□□□□ 0.8
CTDSP1-212ENST00000494067 MPHOSPH9Q99550 1183 aa20.05■□□□□ 0.8
CTDSP1-212ENST00000494067 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
CTDSP1-212ENST00000494067 RGS17Q9UGC6 210 aaPredicted RBP20.05■□□□□ 0.8
CTDSP1-212ENST00000494067 AHDC1Q5TGY3 1603 aaPredicted RBP20.05■□□□□ 0.8
CTDSP1-212ENST00000494067 CADPS2Q86UW7 1296 aa20.04■□□□□ 0.8
CTDSP1-212ENST00000494067 SETD5Q9C0A6 1442 aa20.03■□□□□ 0.8
CTDSP1-212ENST00000494067 MST1RQ04912 1400 aa20.02■□□□□ 0.8
CTDSP1-212ENST00000494067 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.79
CTDSP1-212ENST00000494067 DCCP43146 1447 aa20.02■□□□□ 0.79
CTDSP1-212ENST00000494067 ROBO2Q9HCK4 1378 aa20.01■□□□□ 0.79
CTDSP1-212ENST00000494067 CCDC144AA2RUR9 1427 aa20.01■□□□□ 0.79
CTDSP1-212ENST00000494067 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
CTDSP1-212ENST00000494067 VGFO15240 615 aaPredicted RBP20■□□□□ 0.79
CTDSP1-212ENST00000494067 NHSL1Q5SYE7 1610 aa20■□□□□ 0.79
CTDSP1-212ENST00000494067 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
CTDSP1-212ENST00000494067 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
CTDSP1-212ENST00000494067 BRINP3Q76B58 766 aa19.99■□□□□ 0.79
CTDSP1-212ENST00000494067 PTCH1Q13635 1447 aa19.99■□□□□ 0.79
CTDSP1-212ENST00000494067 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
CTDSP1-212ENST00000494067 RPGRIP1LQ68CZ1 1315 aa19.99■□□□□ 0.79
CTDSP1-212ENST00000494067 LRP6O75581 1613 aa19.98■□□□□ 0.79
CTDSP1-212ENST00000494067 SHPRHQ149N8 1683 aa19.98■□□□□ 0.79
CTDSP1-212ENST00000494067 RGL3Q3MIN7 710 aa19.96■□□□□ 0.79
CTDSP1-212ENST00000494067 ACIN1Q9UKV3 1341 aaKnown RBP19.96■□□□□ 0.79
CTDSP1-212ENST00000494067 JCADQ9P266 1359 aa19.95■□□□□ 0.78
CTDSP1-212ENST00000494067 PIK3C2GO75747 1445 aa19.93■□□□□ 0.78
CTDSP1-212ENST00000494067 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
CTDSP1-212ENST00000494067 KNDC1Q76NI1 1749 aa19.91■□□□□ 0.78
CTDSP1-212ENST00000494067 POTEAQ6S8J7 498 aa19.91■□□□□ 0.78
CTDSP1-212ENST00000494067 LAMC1P11047 1609 aa19.91■□□□□ 0.78
CTDSP1-212ENST00000494067 C1orf167Q5SNV9 1468 aa19.9■□□□□ 0.78
CTDSP1-212ENST00000494067 NRXN1Q9ULB1 1477 aa19.89■□□□□ 0.77
CTDSP1-212ENST00000494067 ANKRD30BQ9BXX2 1392 aa19.88■□□□□ 0.77
CTDSP1-212ENST00000494067 TECPR2O15040 1411 aa19.87■□□□□ 0.77
CTDSP1-212ENST00000494067 CDC42BPGQ6DT37 1551 aa19.87■□□□□ 0.77
CTDSP1-212ENST00000494067 PLEKHH1Q9ULM0 1364 aa19.86■□□□□ 0.77
CTDSP1-212ENST00000494067 SPATA31A6Q5VVP1 1343 aa19.86■□□□□ 0.77
CTDSP1-212ENST00000494067 TMEM132EQ6IEE7 984 aa19.86■□□□□ 0.77
CTDSP1-212ENST00000494067 MYOM2P54296 1465 aa19.86■□□□□ 0.77
CTDSP1-212ENST00000494067 MEX3CQ5U5Q3 659 aaKnown RBP19.85■□□□□ 0.77
CTDSP1-212ENST00000494067 ORAI2Q96SN7 254 aa19.84■□□□□ 0.77
CTDSP1-212ENST00000494067 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.77
CTDSP1-212ENST00000494067 WAPLQ7Z5K2 1190 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms