RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 HDGFP51858 240 aaKnown RBP33.86■■■■□ 3.01
SNIP1-203ENST00000493916 SETD5Q9C0A6 1442 aa33.86■■■■□ 3.01
SNIP1-203ENST00000493916 PLEKHG1Q9ULL1 1385 aa33.85■■■■□ 3.01
SNIP1-203ENST00000493916 ACIN1Q9UKV3 1341 aaKnown RBP33.84■■■■□ 3.01
SNIP1-203ENST00000493916 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.83■■■■□ 3.01
SNIP1-203ENST00000493916 PPP1R15AO75807 674 aaPredicted RBP33.79■■■■□ 3
SNIP1-203ENST00000493916 LRRC7Q96NW7 1537 aa33.79■■■■□ 3
SNIP1-203ENST00000493916 SLC26A8Q96RN1 970 aa33.76■■■□□ 2.99
SNIP1-203ENST00000493916 KIF1BO60333 1816 aa33.73■■■□□ 2.99
SNIP1-203ENST00000493916 RAB3GAP2Q9H2M9 1393 aa33.72■■■□□ 2.99
SNIP1-203ENST00000493916 NWD1Q149M9 1564 aa33.72■■■□□ 2.99
SNIP1-203ENST00000493916 MPHOSPH9Q99550 1183 aa33.72■■■□□ 2.99
SNIP1-203ENST00000493916 DIP2AQ14689 1571 aa33.72■■■□□ 2.99
SNIP1-203ENST00000493916 UBAP1LF5GYI3 381 aa33.71■■■□□ 2.99
SNIP1-203ENST00000493916 BCANQ96GW7 911 aa33.71■■■□□ 2.99
SNIP1-203ENST00000493916 KCNA6P17658 529 aa33.69■■■□□ 2.98
SNIP1-203ENST00000493916 NUTM2DQ5VT03 806 aaPredicted RBP33.68■■■□□ 2.98
SNIP1-203ENST00000493916 ADAMTS13Q76LX8 1427 aa33.68■■■□□ 2.98
SNIP1-203ENST00000493916 NEXMIFQ5QGS0 1516 aa33.68■■■□□ 2.98
SNIP1-203ENST00000493916 ZNF326Q5BKZ1 582 aaKnown RBP33.67■■■□□ 2.98
SNIP1-203ENST00000493916 NKTRP30414 1462 aaKnown RBP33.66■■■□□ 2.98
SNIP1-203ENST00000493916 FOXD1Q16676 465 aa33.66■■■□□ 2.98
SNIP1-203ENST00000493916 TBX22Q9Y458 520 aa33.66■■■□□ 2.98
SNIP1-203ENST00000493916 SETBP1Q9Y6X0 1596 aa33.64■■■□□ 2.98
SNIP1-203ENST00000493916 SENP3Q9H4L4 574 aaPredicted RBP33.62■■■□□ 2.97
SNIP1-203ENST00000493916 XIRP1Q702N8 1843 aaKnown RBP33.62■■■□□ 2.97
SNIP1-203ENST00000493916 NRXN3Q9Y4C0 1643 aa33.61■■■□□ 2.97
SNIP1-203ENST00000493916 CHD2O14647 1828 aaKnown RBP33.61■■■□□ 2.97
SNIP1-203ENST00000493916 TOM1O60784 492 aa33.61■■■□□ 2.97
SNIP1-203ENST00000493916 CCDC144AA2RUR9 1427 aa33.61■■■□□ 2.97
SNIP1-203ENST00000493916 ALKQ9UM73 1620 aa33.61■■■□□ 2.97
SNIP1-203ENST00000493916 PIK3R4Q99570 1358 aa33.6■■■□□ 2.97
SNIP1-203ENST00000493916 HRCP23327 699 aa33.57■■■□□ 2.96
SNIP1-203ENST00000493916 TMEM94Q12767 1356 aa33.55■■■□□ 2.96
SNIP1-203ENST00000493916 RPGRIP1LQ68CZ1 1315 aa33.54■■■□□ 2.96
SNIP1-203ENST00000493916 PROSER2Q86WR7 435 aaPredicted RBP33.51■■■□□ 2.95
SNIP1-203ENST00000493916 PPLO60437 1756 aa33.51■■■□□ 2.95
SNIP1-203ENST00000493916 SPATA31E1Q6ZUB1 1445 aa33.51■■■□□ 2.95
SNIP1-203ENST00000493916 VGFO15240 615 aaPredicted RBP33.48■■■□□ 2.95
SNIP1-203ENST00000493916 PIP4K2BP78356 416 aa33.46■■■□□ 2.95
SNIP1-203ENST00000493916 PTPRUQ92729 1446 aa33.45■■■□□ 2.95
SNIP1-203ENST00000493916 XRN1Q8IZH2 1706 aaKnown RBP33.45■■■□□ 2.94
SNIP1-203ENST00000493916 SCAF1Q9H7N4 1312 aaKnown RBP33.44■■■□□ 2.94
SNIP1-203ENST00000493916 NCOA3Q9Y6Q9 1424 aa33.44■■■□□ 2.94
SNIP1-203ENST00000493916 METP08581 1390 aa33.42■■■□□ 2.94
SNIP1-203ENST00000493916 IFT172Q9UG01 1749 aa33.42■■■□□ 2.94
SNIP1-203ENST00000493916 SETD1AO15047 1707 aaKnown RBP33.4■■■□□ 2.94
SNIP1-203ENST00000493916 RBM33Q96EV2 1170 aaKnown RBP33.4■■■□□ 2.94
SNIP1-203ENST00000493916 AMOTL2Q9Y2J4 779 aa33.39■■■□□ 2.94
SNIP1-203ENST00000493916 MSH6P52701 1360 aa33.38■■■□□ 2.93
SNIP1-203ENST00000493916 ANKRD30BQ9BXX2 1392 aa33.37■■■□□ 2.93
SNIP1-203ENST00000493916 RGL3Q3MIN7 710 aa33.35■■■□□ 2.93
SNIP1-203ENST00000493916 HSPA1LP34931 641 aa33.31■■■□□ 2.92
SNIP1-203ENST00000493916 ADGRF5Q8IZF2 1346 aa33.29■■■□□ 2.92
SNIP1-203ENST00000493916 FAM135BQ49AJ0 1406 aa33.28■■■□□ 2.92
SNIP1-203ENST00000493916 PRAG1Q86YV5 1406 aa33.28■■■□□ 2.92
SNIP1-203ENST00000493916 PIK3C2GO75747 1445 aa33.26■■■□□ 2.91
SNIP1-203ENST00000493916 MYOM2P54296 1465 aa33.25■■■□□ 2.91
SNIP1-203ENST00000493916 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.25■■■□□ 2.91
SNIP1-203ENST00000493916 PTCH1Q13635 1447 aa33.25■■■□□ 2.91
SNIP1-203ENST00000493916 C14orf37Q86TY3 774 aa33.24■■■□□ 2.91
SNIP1-203ENST00000493916 C19orf44Q9H6X5 657 aa33.23■■■□□ 2.91
SNIP1-203ENST00000493916 NRXN1Q9ULB1 1477 aa33.23■■■□□ 2.91
SNIP1-203ENST00000493916 ROBO1Q9Y6N7 1651 aa33.22■■■□□ 2.91
SNIP1-203ENST00000493916 DCCP43146 1447 aa33.21■■■□□ 2.91
SNIP1-203ENST00000493916 SLAIN2Q9P270 581 aa33.19■■■□□ 2.9
SNIP1-203ENST00000493916 CADPS2Q86UW7 1296 aa33.18■■■□□ 2.9
SNIP1-203ENST00000493916 ADGRL3Q9HAR2 1447 aa33.17■■■□□ 2.9
SNIP1-203ENST00000493916 ATF3P18847 181 aa33.15■■■□□ 2.9
SNIP1-203ENST00000493916 ASXL1Q8IXJ9 1541 aa33.15■■■□□ 2.9
SNIP1-203ENST00000493916 ROBO2Q9HCK4 1378 aa33.15■■■□□ 2.9
SNIP1-203ENST00000493916 NALCNQ8IZF0 1738 aa33.14■■■□□ 2.9
SNIP1-203ENST00000493916 LAMC1P11047 1609 aa33.14■■■□□ 2.9
SNIP1-203ENST00000493916 TECPR2O15040 1411 aa33.11■■■□□ 2.89
SNIP1-203ENST00000493916 LRPPRCP42704 1394 aaKnown RBP33.09■■■□□ 2.89
SNIP1-203ENST00000493916 KNDC1Q76NI1 1749 aa33.09■■■□□ 2.89
SNIP1-203ENST00000493916 C14orf93Q9H972 538 aaKnown RBP33.08■■■□□ 2.89
SNIP1-203ENST00000493916 MST1RQ04912 1400 aa33.05■■■□□ 2.88
SNIP1-203ENST00000493916 STAC3Q96MF2 364 aa33.05■■■□□ 2.88
SNIP1-203ENST00000493916 ABCC11Q96J66 1382 aa33.05■■■□□ 2.88
SNIP1-203ENST00000493916 YTHDC2Q9H6S0 1430 aaKnown RBP33.03■■■□□ 2.88
SNIP1-203ENST00000493916 DHX57Q6P158 1386 aaKnown RBP33.03■■■□□ 2.88
SNIP1-203ENST00000493916 DISP3Q9P2K9 1392 aa33.02■■■□□ 2.88
SNIP1-203ENST00000493916 TMEM132EQ6IEE7 984 aa33.02■■■□□ 2.88
SNIP1-203ENST00000493916 MED1Q15648 1581 aaPredicted RBP33.01■■■□□ 2.88
SNIP1-203ENST00000493916 PHLPP1O60346 1717 aa33■■■□□ 2.87
SNIP1-203ENST00000493916 TRIM26Q12899 539 aaPredicted RBP33■■■□□ 2.87
SNIP1-203ENST00000493916 CFAP70Q5T0N1 1121 aa33■■■□□ 2.87
SNIP1-203ENST00000493916 DCAF11Q8TEB1 546 aa33■■■□□ 2.87
SNIP1-203ENST00000493916 AHDC1Q5TGY3 1603 aaPredicted RBP32.99■■■□□ 2.87
SNIP1-203ENST00000493916 STK26Q9P289 416 aa32.98■■■□□ 2.87
SNIP1-203ENST00000493916 CDC42BPGQ6DT37 1551 aa32.96■■■□□ 2.87
SNIP1-203ENST00000493916 BRINP3Q76B58 766 aa32.96■■■□□ 2.87
SNIP1-203ENST00000493916 ADGRB1O14514 1584 aa32.96■■■□□ 2.87
SNIP1-203ENST00000493916 COL16A1Q07092 1604 aaPredicted RBP32.95■■■□□ 2.87
SNIP1-203ENST00000493916 KDM2AQ9Y2K7 1162 aa32.95■■■□□ 2.87
SNIP1-203ENST00000493916 SIRT1Q96EB6 747 aa32.93■■■□□ 2.86
SNIP1-203ENST00000493916 C1orf167Q5SNV9 1468 aa32.92■■■□□ 2.86
SNIP1-203ENST00000493916 WAPLQ7Z5K2 1190 aa32.9■■■□□ 2.86
SNIP1-203ENST00000493916 PLEKHH1Q9ULM0 1364 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms