RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 TMEM131LA2VDJ0 1609 aa23.39■■□□□ 1.33
PSMB4-205ENST00000493673 SLC26A8Q96RN1 970 aa23.38■■□□□ 1.33
PSMB4-205ENST00000493673 TRPM2O94759 1503 aa23.38■■□□□ 1.33
PSMB4-205ENST00000493673 SPHKAPQ2M3C7 1700 aa23.38■■□□□ 1.33
PSMB4-205ENST00000493673 ZFYVE9O95405 1425 aa23.37■■□□□ 1.33
PSMB4-205ENST00000493673 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
PSMB4-205ENST00000493673 IQGAP1P46940 1657 aa23.36■■□□□ 1.33
PSMB4-205ENST00000493673 PLEKHG1Q9ULL1 1385 aa23.36■■□□□ 1.33
PSMB4-205ENST00000493673 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
PSMB4-205ENST00000493673 ILDR1Q86SU0 546 aaPredicted RBP23.35■■□□□ 1.33
PSMB4-205ENST00000493673 CCDC144AA2RUR9 1427 aa23.35■■□□□ 1.33
PSMB4-205ENST00000493673 LTBP4Q8N2S1 1624 aa23.35■■□□□ 1.33
PSMB4-205ENST00000493673 RPGRIP1LQ68CZ1 1315 aa23.34■■□□□ 1.33
PSMB4-205ENST00000493673 VGFO15240 615 aaPredicted RBP23.33■■□□□ 1.33
PSMB4-205ENST00000493673 TBX22Q9Y458 520 aa23.33■■□□□ 1.33
PSMB4-205ENST00000493673 KCNA6P17658 529 aa23.31■■□□□ 1.32
PSMB4-205ENST00000493673 CPS1P31327 1500 aa23.29■■□□□ 1.32
PSMB4-205ENST00000493673 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
PSMB4-205ENST00000493673 RGL3Q3MIN7 710 aa23.29■■□□□ 1.32
PSMB4-205ENST00000493673 IQSEC2Q5JU85 1478 aa23.27■■□□□ 1.32
PSMB4-205ENST00000493673 MYO5BQ9ULV0 1848 aa23.26■■□□□ 1.31
PSMB4-205ENST00000493673 UBAP1LF5GYI3 381 aa23.24■■□□□ 1.31
PSMB4-205ENST00000493673 PROSER2Q86WR7 435 aaPredicted RBP23.24■■□□□ 1.31
PSMB4-205ENST00000493673 KIF1BO60333 1816 aa23.23■■□□□ 1.31
PSMB4-205ENST00000493673 TOM1O60784 492 aa23.22■■□□□ 1.31
PSMB4-205ENST00000493673 ANKRD30BQ9BXX2 1392 aa23.21■■□□□ 1.31
PSMB4-205ENST00000493673 PIK3R4Q99570 1358 aa23.19■■□□□ 1.3
PSMB4-205ENST00000493673 ADAMTS13Q76LX8 1427 aa23.18■■□□□ 1.3
PSMB4-205ENST00000493673 SPATA31E1Q6ZUB1 1445 aa23.16■■□□□ 1.3
PSMB4-205ENST00000493673 AMOTL2Q9Y2J4 779 aa23.16■■□□□ 1.3
PSMB4-205ENST00000493673 NEXMIFQ5QGS0 1516 aa23.16■■□□□ 1.3
PSMB4-205ENST00000493673 LRRC7Q96NW7 1537 aa23.16■■□□□ 1.3
PSMB4-205ENST00000493673 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
PSMB4-205ENST00000493673 TMEM94Q12767 1356 aa23.12■■□□□ 1.29
PSMB4-205ENST00000493673 ADGRF5Q8IZF2 1346 aa23.11■■□□□ 1.29
PSMB4-205ENST00000493673 SCAF1Q9H7N4 1312 aaKnown RBP23.11■■□□□ 1.29
PSMB4-205ENST00000493673 PIP4K2BP78356 416 aa23.1■■□□□ 1.29
PSMB4-205ENST00000493673 C14orf37Q86TY3 774 aa23.1■■□□□ 1.29
PSMB4-205ENST00000493673 RBM33Q96EV2 1170 aaKnown RBP23.1■■□□□ 1.29
PSMB4-205ENST00000493673 STAC3Q96MF2 364 aa23.1■■□□□ 1.29
PSMB4-205ENST00000493673 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
PSMB4-205ENST00000493673 NKTRP30414 1462 aaKnown RBP23.09■■□□□ 1.29
PSMB4-205ENST00000493673 METP08581 1390 aa23.09■■□□□ 1.29
PSMB4-205ENST00000493673 STRCP1A6NGW2 1772 aa23.08■■□□□ 1.29
PSMB4-205ENST00000493673 DCAF11Q8TEB1 546 aa23.06■■□□□ 1.28
PSMB4-205ENST00000493673 KDM2AQ9Y2K7 1162 aa23.06■■□□□ 1.28
PSMB4-205ENST00000493673 NCOA3Q9Y6Q9 1424 aa23.05■■□□□ 1.28
PSMB4-205ENST00000493673 MSH6P52701 1360 aa23.05■■□□□ 1.28
PSMB4-205ENST00000493673 NWD1Q149M9 1564 aa23.03■■□□□ 1.28
PSMB4-205ENST00000493673 PTPRUQ92729 1446 aa23.03■■□□□ 1.28
PSMB4-205ENST00000493673 C19orf44Q9H6X5 657 aa23.03■■□□□ 1.28
PSMB4-205ENST00000493673 CHD2O14647 1828 aaKnown RBP23.03■■□□□ 1.28
PSMB4-205ENST00000493673 C14orf93Q9H972 538 aaKnown RBP23.01■■□□□ 1.27
PSMB4-205ENST00000493673 PPLO60437 1756 aa23.01■■□□□ 1.27
PSMB4-205ENST00000493673 NRXN3Q9Y4C0 1643 aa23.01■■□□□ 1.27
PSMB4-205ENST00000493673 ATF3P18847 181 aa23■■□□□ 1.27
PSMB4-205ENST00000493673 ALKQ9UM73 1620 aa23■■□□□ 1.27
PSMB4-205ENST00000493673 CADPS2Q86UW7 1296 aa22.98■■□□□ 1.27
PSMB4-205ENST00000493673 STK26Q9P289 416 aa22.98■■□□□ 1.27
PSMB4-205ENST00000493673 CFAP70Q5T0N1 1121 aa22.97■■□□□ 1.27
PSMB4-205ENST00000493673 TMEM132EQ6IEE7 984 aa22.97■■□□□ 1.27
PSMB4-205ENST00000493673 NEUROD1Q13562 356 aa22.97■■□□□ 1.27
PSMB4-205ENST00000493673 PCGF6Q9BYE7 350 aa22.97■■□□□ 1.27
PSMB4-205ENST00000493673 SLAIN2Q9P270 581 aa22.97■■□□□ 1.27
PSMB4-205ENST00000493673 PIK3C2GO75747 1445 aa22.96■■□□□ 1.27
PSMB4-205ENST00000493673 DHX57Q6P158 1386 aaKnown RBP22.95■■□□□ 1.27
PSMB4-205ENST00000493673 MYOM2P54296 1465 aa22.95■■□□□ 1.26
PSMB4-205ENST00000493673 SIN3AQ96ST3 1273 aa22.95■■□□□ 1.26
PSMB4-205ENST00000493673 LRPPRCP42704 1394 aaKnown RBP22.91■■□□□ 1.26
PSMB4-205ENST00000493673 NRXN1Q9ULB1 1477 aa22.91■■□□□ 1.26
PSMB4-205ENST00000493673 ABCC11Q96J66 1382 aa22.9■■□□□ 1.26
PSMB4-205ENST00000493673 HSPA1LP34931 641 aa22.9■■□□□ 1.26
PSMB4-205ENST00000493673 IFT172Q9UG01 1749 aa22.89■■□□□ 1.26
PSMB4-205ENST00000493673 FAM135BQ49AJ0 1406 aa22.89■■□□□ 1.25
PSMB4-205ENST00000493673 ROBO2Q9HCK4 1378 aa22.89■■□□□ 1.25
PSMB4-205ENST00000493673 SIRT1Q96EB6 747 aa22.89■■□□□ 1.25
PSMB4-205ENST00000493673 PTCH1Q13635 1447 aa22.88■■□□□ 1.25
PSMB4-205ENST00000493673 XIRP1Q702N8 1843 aaKnown RBP22.88■■□□□ 1.25
PSMB4-205ENST00000493673 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
PSMB4-205ENST00000493673 L3MBTL2Q969R5 705 aa22.87■■□□□ 1.25
PSMB4-205ENST00000493673 YTHDC2Q9H6S0 1430 aaKnown RBP22.86■■□□□ 1.25
PSMB4-205ENST00000493673 WAPLQ7Z5K2 1190 aa22.86■■□□□ 1.25
PSMB4-205ENST00000493673 PRAG1Q86YV5 1406 aa22.84■■□□□ 1.25
PSMB4-205ENST00000493673 DCCP43146 1447 aa22.84■■□□□ 1.25
PSMB4-205ENST00000493673 POGKQ9P215 609 aa22.84■■□□□ 1.25
PSMB4-205ENST00000493673 ADGRL3Q9HAR2 1447 aa22.83■■□□□ 1.25
PSMB4-205ENST00000493673 SETD1AO15047 1707 aaKnown RBP22.82■■□□□ 1.24
PSMB4-205ENST00000493673 TRAK1Q9UPV9 953 aa22.81■■□□□ 1.24
PSMB4-205ENST00000493673 TECPR2O15040 1411 aa22.81■■□□□ 1.24
PSMB4-205ENST00000493673 PRAM1Q96QH2 718 aa22.79■■□□□ 1.24
PSMB4-205ENST00000493673 LAMC1P11047 1609 aa22.78■■□□□ 1.24
PSMB4-205ENST00000493673 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.77■■□□□ 1.24
PSMB4-205ENST00000493673 SAFB2Q14151 953 aaKnown RBP eCLIP22.76■■□□□ 1.23
PSMB4-205ENST00000493673 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
PSMB4-205ENST00000493673 BRINP3Q76B58 766 aa22.75■■□□□ 1.23
PSMB4-205ENST00000493673 ASXL1Q8IXJ9 1541 aa22.75■■□□□ 1.23
PSMB4-205ENST00000493673 PLEKHH1Q9ULM0 1364 aa22.73■■□□□ 1.23
PSMB4-205ENST00000493673 NBPF1Q3BBV0 1214 aa22.72■■□□□ 1.23
PSMB4-205ENST00000493673 MST1RQ04912 1400 aa22.72■■□□□ 1.23
PSMB4-205ENST00000493673 ADGRB1O14514 1584 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms