RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 IQGAP1P46940 1657 aa10.38□□□□□ -0.75
TOP3A-207ENST00000493648 PPP1R15AO75807 674 aaPredicted RBP10.38□□□□□ -0.75
TOP3A-207ENST00000493648 SETD5Q9C0A6 1442 aa10.38□□□□□ -0.75
TOP3A-207ENST00000493648 ZNF326Q5BKZ1 582 aaKnown RBP10.36□□□□□ -0.75
TOP3A-207ENST00000493648 MPHOSPH9Q99550 1183 aa10.36□□□□□ -0.75
TOP3A-207ENST00000493648 TMEM131LA2VDJ0 1609 aa10.36□□□□□ -0.75
TOP3A-207ENST00000493648 IQSEC2Q5JU85 1478 aa10.36□□□□□ -0.75
TOP3A-207ENST00000493648 SPHKAPQ2M3C7 1700 aa10.36□□□□□ -0.75
TOP3A-207ENST00000493648 MYO5BQ9ULV0 1848 aa10.35□□□□□ -0.75
TOP3A-207ENST00000493648 RIMS2Q9UQ26 1411 aa10.35□□□□□ -0.75
TOP3A-207ENST00000493648 CPS1P31327 1500 aa10.35□□□□□ -0.75
TOP3A-207ENST00000493648 SLC26A8Q96RN1 970 aa10.35□□□□□ -0.75
TOP3A-207ENST00000493648 HRCP23327 699 aa10.33□□□□□ -0.76
TOP3A-207ENST00000493648 MAPK8IP2Q13387 824 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-207ENST00000493648 NUTM2DQ5VT03 806 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-207ENST00000493648 ZFYVE9O95405 1425 aa10.33□□□□□ -0.76
TOP3A-207ENST00000493648 RAB3GAP2Q9H2M9 1393 aa10.32□□□□□ -0.76
TOP3A-207ENST00000493648 PLEKHG1Q9ULL1 1385 aa10.32□□□□□ -0.76
TOP3A-207ENST00000493648 UBAP1LF5GYI3 381 aa10.32□□□□□ -0.76
TOP3A-207ENST00000493648 KCNA6P17658 529 aa10.32□□□□□ -0.76
TOP3A-207ENST00000493648 TBX22Q9Y458 520 aa10.32□□□□□ -0.76
TOP3A-207ENST00000493648 TRPM2O94759 1503 aa10.32□□□□□ -0.76
TOP3A-207ENST00000493648 KIF1BO60333 1816 aa10.31□□□□□ -0.76
TOP3A-207ENST00000493648 TOM1O60784 492 aa10.31□□□□□ -0.76
TOP3A-207ENST00000493648 RPGRIP1LQ68CZ1 1315 aa10.3□□□□□ -0.76
TOP3A-207ENST00000493648 CLTCL1P53675 1640 aa10.29□□□□□ -0.76
TOP3A-207ENST00000493648 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-207ENST00000493648 PROSER2Q86WR7 435 aaPredicted RBP10.29□□□□□ -0.76
TOP3A-207ENST00000493648 CCDC144AA2RUR9 1427 aa10.28□□□□□ -0.76
TOP3A-207ENST00000493648 STRCP1A6NGW2 1772 aa10.28□□□□□ -0.76
TOP3A-207ENST00000493648 LRRC7Q96NW7 1537 aa10.28□□□□□ -0.76
TOP3A-207ENST00000493648 PIP4K2BP78356 416 aa10.26□□□□□ -0.77
TOP3A-207ENST00000493648 RGL3Q3MIN7 710 aa10.26□□□□□ -0.77
TOP3A-207ENST00000493648 SCAF1Q9H7N4 1312 aaKnown RBP10.26□□□□□ -0.77
TOP3A-207ENST00000493648 PIK3R4Q99570 1358 aa10.26□□□□□ -0.77
TOP3A-207ENST00000493648 ADAMTS13Q76LX8 1427 aa10.25□□□□□ -0.77
TOP3A-207ENST00000493648 CHD2O14647 1828 aaKnown RBP10.25□□□□□ -0.77
TOP3A-207ENST00000493648 NEXMIFQ5QGS0 1516 aa10.24□□□□□ -0.77
TOP3A-207ENST00000493648 DIP2AQ14689 1571 aa10.24□□□□□ -0.77
TOP3A-207ENST00000493648 AMOTL2Q9Y2J4 779 aa10.24□□□□□ -0.77
TOP3A-207ENST00000493648 TMEM94Q12767 1356 aa10.24□□□□□ -0.77
TOP3A-207ENST00000493648 RBM33Q96EV2 1170 aaKnown RBP10.23□□□□□ -0.77
TOP3A-207ENST00000493648 NKTRP30414 1462 aaKnown RBP10.23□□□□□ -0.77
TOP3A-207ENST00000493648 C14orf37Q86TY3 774 aa10.22□□□□□ -0.77
TOP3A-207ENST00000493648 NWD1Q149M9 1564 aa10.22□□□□□ -0.77
TOP3A-207ENST00000493648 SETBP1Q9Y6X0 1596 aa10.22□□□□□ -0.77
TOP3A-207ENST00000493648 MSH6P52701 1360 aa10.21□□□□□ -0.78
TOP3A-207ENST00000493648 ANKRD30BQ9BXX2 1392 aa10.21□□□□□ -0.78
TOP3A-207ENST00000493648 SPATA31E1Q6ZUB1 1445 aa10.21□□□□□ -0.78
TOP3A-207ENST00000493648 NCOA3Q9Y6Q9 1424 aa10.21□□□□□ -0.78
TOP3A-207ENST00000493648 XIRP1Q702N8 1843 aaKnown RBP10.21□□□□□ -0.78
TOP3A-207ENST00000493648 PPLO60437 1756 aa10.2□□□□□ -0.78
TOP3A-207ENST00000493648 METP08581 1390 aa10.2□□□□□ -0.78
TOP3A-207ENST00000493648 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
TOP3A-207ENST00000493648 NRXN3Q9Y4C0 1643 aa10.19□□□□□ -0.78
TOP3A-207ENST00000493648 ADGRF5Q8IZF2 1346 aa10.19□□□□□ -0.78
TOP3A-207ENST00000493648 C19orf44Q9H6X5 657 aa10.19□□□□□ -0.78
TOP3A-207ENST00000493648 PTPRUQ92729 1446 aa10.18□□□□□ -0.78
TOP3A-207ENST00000493648 ATF3P18847 181 aa10.18□□□□□ -0.78
TOP3A-207ENST00000493648 HSPA1LP34931 641 aa10.17□□□□□ -0.78
TOP3A-207ENST00000493648 CADPS2Q86UW7 1296 aa10.17□□□□□ -0.78
TOP3A-207ENST00000493648 STAC3Q96MF2 364 aa10.17□□□□□ -0.78
TOP3A-207ENST00000493648 SLAIN2Q9P270 581 aa10.17□□□□□ -0.78
TOP3A-207ENST00000493648 ALKQ9UM73 1620 aa10.17□□□□□ -0.78
TOP3A-207ENST00000493648 DCAF11Q8TEB1 546 aa10.16□□□□□ -0.78
TOP3A-207ENST00000493648 KDM2AQ9Y2K7 1162 aa10.16□□□□□ -0.78
TOP3A-207ENST00000493648 C14orf93Q9H972 538 aaKnown RBP10.15□□□□□ -0.78
TOP3A-207ENST00000493648 IFT172Q9UG01 1749 aa10.15□□□□□ -0.78
TOP3A-207ENST00000493648 FAM135BQ49AJ0 1406 aa10.15□□□□□ -0.79
TOP3A-207ENST00000493648 XRN1Q8IZH2 1706 aaKnown RBP10.14□□□□□ -0.79
TOP3A-207ENST00000493648 STK26Q9P289 416 aa10.14□□□□□ -0.79
TOP3A-207ENST00000493648 TMEM132EQ6IEE7 984 aa10.13□□□□□ -0.79
TOP3A-207ENST00000493648 PIK3C2GO75747 1445 aa10.13□□□□□ -0.79
TOP3A-207ENST00000493648 SETD1AO15047 1707 aaKnown RBP10.13□□□□□ -0.79
TOP3A-207ENST00000493648 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.13□□□□□ -0.79
TOP3A-207ENST00000493648 MYOM2P54296 1465 aa10.12□□□□□ -0.79
TOP3A-207ENST00000493648 CFAP70Q5T0N1 1121 aa10.12□□□□□ -0.79
TOP3A-207ENST00000493648 DHX57Q6P158 1386 aaKnown RBP10.12□□□□□ -0.79
TOP3A-207ENST00000493648 PTCH1Q13635 1447 aa10.11□□□□□ -0.79
TOP3A-207ENST00000493648 CACNB1Q02641 598 aaPredicted RBP10.11□□□□□ -0.79
TOP3A-207ENST00000493648 LRPPRCP42704 1394 aaKnown RBP10.11□□□□□ -0.79
TOP3A-207ENST00000493648 ABCC11Q96J66 1382 aa10.11□□□□□ -0.79
TOP3A-207ENST00000493648 ROBO2Q9HCK4 1378 aa10.11□□□□□ -0.79
TOP3A-207ENST00000493648 NRXN1Q9ULB1 1477 aa10.1□□□□□ -0.79
TOP3A-207ENST00000493648 DCCP43146 1447 aa10.1□□□□□ -0.79
TOP3A-207ENST00000493648 WAPLQ7Z5K2 1190 aa10.1□□□□□ -0.79
TOP3A-207ENST00000493648 SIRT1Q96EB6 747 aa10.1□□□□□ -0.79
TOP3A-207ENST00000493648 ROBO1Q9Y6N7 1651 aa10.09□□□□□ -0.79
TOP3A-207ENST00000493648 PRAG1Q86YV5 1406 aa10.09□□□□□ -0.79
TOP3A-207ENST00000493648 ADGRL3Q9HAR2 1447 aa10.09□□□□□ -0.79
TOP3A-207ENST00000493648 YTHDC2Q9H6S0 1430 aaKnown RBP10.08□□□□□ -0.8
TOP3A-207ENST00000493648 LAMC1P11047 1609 aa10.08□□□□□ -0.8
TOP3A-207ENST00000493648 NEUROD1Q13562 356 aa10.08□□□□□ -0.8
TOP3A-207ENST00000493648 SIN3AQ96ST3 1273 aa10.08□□□□□ -0.8
TOP3A-207ENST00000493648 TECPR2O15040 1411 aa10.07□□□□□ -0.8
TOP3A-207ENST00000493648 DISP3Q9P2K9 1392 aa10.07□□□□□ -0.8
TOP3A-207ENST00000493648 BRINP3Q76B58 766 aa10.07□□□□□ -0.8
TOP3A-207ENST00000493648 POGKQ9P215 609 aa10.07□□□□□ -0.8
TOP3A-207ENST00000493648 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
TOP3A-207ENST00000493648 TRAK1Q9UPV9 953 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms