RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 SETD5Q9C0A6 1442 aa20.89■□□□□ 0.94
MMP11-213ENST00000493132 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.93
MMP11-213ENST00000493132 ZFYVE9O95405 1425 aa20.88■□□□□ 0.93
MMP11-213ENST00000493132 BCANQ96GW7 911 aa20.87■□□□□ 0.93
MMP11-213ENST00000493132 IQSEC2Q5JU85 1478 aa20.87■□□□□ 0.93
MMP11-213ENST00000493132 RAB3GAP2Q9H2M9 1393 aa20.85■□□□□ 0.93
MMP11-213ENST00000493132 FOXD1Q16676 465 aa20.84■□□□□ 0.93
MMP11-213ENST00000493132 NUTM2DQ5VT03 806 aaPredicted RBP20.84■□□□□ 0.93
MMP11-213ENST00000493132 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
MMP11-213ENST00000493132 SLC26A8Q96RN1 970 aa20.82■□□□□ 0.92
MMP11-213ENST00000493132 PLEKHG1Q9ULL1 1385 aa20.81■□□□□ 0.92
MMP11-213ENST00000493132 HDGFP51858 240 aaKnown RBP20.79■□□□□ 0.92
MMP11-213ENST00000493132 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.79■□□□□ 0.92
MMP11-213ENST00000493132 MPHOSPH9Q99550 1183 aa20.79■□□□□ 0.92
MMP11-213ENST00000493132 NEXMIFQ5QGS0 1516 aa20.77■□□□□ 0.92
MMP11-213ENST00000493132 LRRC7Q96NW7 1537 aa20.77■□□□□ 0.92
MMP11-213ENST00000493132 UBAP1LF5GYI3 381 aa20.76■□□□□ 0.91
MMP11-213ENST00000493132 XIRP1Q702N8 1843 aaKnown RBP20.76■□□□□ 0.91
MMP11-213ENST00000493132 DIP2AQ14689 1571 aa20.76■□□□□ 0.91
MMP11-213ENST00000493132 NWD1Q149M9 1564 aa20.76■□□□□ 0.91
MMP11-213ENST00000493132 CCDC144AA2RUR9 1427 aa20.75■□□□□ 0.91
MMP11-213ENST00000493132 CHD2O14647 1828 aaKnown RBP20.74■□□□□ 0.91
MMP11-213ENST00000493132 NRXN3Q9Y4C0 1643 aa20.73■□□□□ 0.91
MMP11-213ENST00000493132 ACIN1Q9UKV3 1341 aaKnown RBP20.73■□□□□ 0.91
MMP11-213ENST00000493132 PPLO60437 1756 aa20.72■□□□□ 0.91
MMP11-213ENST00000493132 ADAMTS13Q76LX8 1427 aa20.71■□□□□ 0.91
MMP11-213ENST00000493132 SCAF1Q9H7N4 1312 aaKnown RBP20.71■□□□□ 0.91
MMP11-213ENST00000493132 SETBP1Q9Y6X0 1596 aa20.71■□□□□ 0.91
MMP11-213ENST00000493132 NKTRP30414 1462 aaKnown RBP20.7■□□□□ 0.9
MMP11-213ENST00000493132 KCNA6P17658 529 aa20.68■□□□□ 0.9
MMP11-213ENST00000493132 IFT172Q9UG01 1749 aa20.67■□□□□ 0.9
MMP11-213ENST00000493132 PIP4K2BP78356 416 aa20.66■□□□□ 0.9
MMP11-213ENST00000493132 TMEM94Q12767 1356 aa20.65■□□□□ 0.9
MMP11-213ENST00000493132 RBM33Q96EV2 1170 aaKnown RBP20.65■□□□□ 0.9
MMP11-213ENST00000493132 ALKQ9UM73 1620 aa20.64■□□□□ 0.9
MMP11-213ENST00000493132 TOM1O60784 492 aa20.64■□□□□ 0.89
MMP11-213ENST00000493132 PROSER2Q86WR7 435 aaPredicted RBP20.64■□□□□ 0.89
MMP11-213ENST00000493132 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
MMP11-213ENST00000493132 RGL3Q3MIN7 710 aa20.63■□□□□ 0.89
MMP11-213ENST00000493132 SPATA31E1Q6ZUB1 1445 aa20.62■□□□□ 0.89
MMP11-213ENST00000493132 XRN1Q8IZH2 1706 aaKnown RBP20.62■□□□□ 0.89
MMP11-213ENST00000493132 SETD1AO15047 1707 aaKnown RBP20.61■□□□□ 0.89
MMP11-213ENST00000493132 PIK3R4Q99570 1358 aa20.6■□□□□ 0.89
MMP11-213ENST00000493132 PTPRUQ92729 1446 aa20.6■□□□□ 0.89
MMP11-213ENST00000493132 RPGRIP1LQ68CZ1 1315 aa20.59■□□□□ 0.89
MMP11-213ENST00000493132 VGFO15240 615 aaPredicted RBP20.59■□□□□ 0.89
MMP11-213ENST00000493132 METP08581 1390 aa20.58■□□□□ 0.88
MMP11-213ENST00000493132 HRCP23327 699 aa20.57■□□□□ 0.88
MMP11-213ENST00000493132 C14orf37Q86TY3 774 aa20.57■□□□□ 0.88
MMP11-213ENST00000493132 MSH6P52701 1360 aa20.56■□□□□ 0.88
MMP11-213ENST00000493132 AMOTL2Q9Y2J4 779 aa20.55■□□□□ 0.88
MMP11-213ENST00000493132 ANKRD30BQ9BXX2 1392 aa20.55■□□□□ 0.88
MMP11-213ENST00000493132 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.53■□□□□ 0.88
MMP11-213ENST00000493132 ADGRF5Q8IZF2 1346 aa20.53■□□□□ 0.88
MMP11-213ENST00000493132 ROBO1Q9Y6N7 1651 aa20.5■□□□□ 0.87
MMP11-213ENST00000493132 NALCNQ8IZF0 1738 aa20.5■□□□□ 0.87
MMP11-213ENST00000493132 HSPA1LP34931 641 aa20.49■□□□□ 0.87
MMP11-213ENST00000493132 MYOM2P54296 1465 aa20.49■□□□□ 0.87
MMP11-213ENST00000493132 PIK3C2GO75747 1445 aa20.48■□□□□ 0.87
MMP11-213ENST00000493132 LAMC1P11047 1609 aa20.47■□□□□ 0.87
MMP11-213ENST00000493132 ASXL1Q8IXJ9 1541 aa20.47■□□□□ 0.87
MMP11-213ENST00000493132 PTCH1Q13635 1447 aa20.45■□□□□ 0.86
MMP11-213ENST00000493132 NCOA3Q9Y6Q9 1424 aa20.45■□□□□ 0.86
MMP11-213ENST00000493132 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
MMP11-213ENST00000493132 NRXN1Q9ULB1 1477 aa20.43■□□□□ 0.86
MMP11-213ENST00000493132 ATF3P18847 181 aa20.42■□□□□ 0.86
MMP11-213ENST00000493132 TRIM26Q12899 539 aaPredicted RBP20.42■□□□□ 0.86
MMP11-213ENST00000493132 ROBO2Q9HCK4 1378 aa20.42■□□□□ 0.86
MMP11-213ENST00000493132 ADGRL3Q9HAR2 1447 aa20.42■□□□□ 0.86
MMP11-213ENST00000493132 STK26Q9P289 416 aa20.41■□□□□ 0.86
MMP11-213ENST00000493132 FAM135BQ49AJ0 1406 aa20.4■□□□□ 0.86
MMP11-213ENST00000493132 C19orf44Q9H6X5 657 aa20.4■□□□□ 0.86
MMP11-213ENST00000493132 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
MMP11-213ENST00000493132 PHLPP1O60346 1717 aa20.39■□□□□ 0.86
MMP11-213ENST00000493132 DCCP43146 1447 aa20.39■□□□□ 0.85
MMP11-213ENST00000493132 CADPS2Q86UW7 1296 aa20.39■□□□□ 0.85
MMP11-213ENST00000493132 SLAIN2Q9P270 581 aa20.39■□□□□ 0.85
MMP11-213ENST00000493132 PRAG1Q86YV5 1406 aa20.38■□□□□ 0.85
MMP11-213ENST00000493132 TMEM132EQ6IEE7 984 aa20.38■□□□□ 0.85
MMP11-213ENST00000493132 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
MMP11-213ENST00000493132 LRPPRCP42704 1394 aaKnown RBP20.36■□□□□ 0.85
MMP11-213ENST00000493132 CFAP70Q5T0N1 1121 aa20.36■□□□□ 0.85
MMP11-213ENST00000493132 YTHDC2Q9H6S0 1430 aaKnown RBP20.36■□□□□ 0.85
MMP11-213ENST00000493132 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
MMP11-213ENST00000493132 TECPR2O15040 1411 aa20.34■□□□□ 0.85
MMP11-213ENST00000493132 MED1Q15648 1581 aaPredicted RBP20.34■□□□□ 0.85
MMP11-213ENST00000493132 DISP3Q9P2K9 1392 aa20.34■□□□□ 0.85
MMP11-213ENST00000493132 MST1RQ04912 1400 aa20.33■□□□□ 0.84
MMP11-213ENST00000493132 C14orf93Q9H972 538 aaKnown RBP20.32■□□□□ 0.84
MMP11-213ENST00000493132 CDC42BPGQ6DT37 1551 aa20.31■□□□□ 0.84
MMP11-213ENST00000493132 ADGRB1O14514 1584 aa20.3■□□□□ 0.84
MMP11-213ENST00000493132 COL16A1Q07092 1604 aaPredicted RBP20.3■□□□□ 0.84
MMP11-213ENST00000493132 ABCC11Q96J66 1382 aa20.3■□□□□ 0.84
MMP11-213ENST00000493132 PLEKHH1Q9ULM0 1364 aa20.3■□□□□ 0.84
MMP11-213ENST00000493132 AHDC1Q5TGY3 1603 aaPredicted RBP20.29■□□□□ 0.84
MMP11-213ENST00000493132 WAPLQ7Z5K2 1190 aa20.29■□□□□ 0.84
MMP11-213ENST00000493132 PCGF6Q9BYE7 350 aa20.28■□□□□ 0.84
MMP11-213ENST00000493132 NHSL1Q5SYE7 1610 aa20.27■□□□□ 0.84
MMP11-213ENST00000493132 NEUROD1Q13562 356 aa20.27■□□□□ 0.84
MMP11-213ENST00000493132 BRINP3Q76B58 766 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms