RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
PTPN7-215ENST00000492451 TRPM2O94759 1503 aa20.49■□□□□ 0.87
PTPN7-215ENST00000492451 LRRC7Q96NW7 1537 aa20.48■□□□□ 0.87
PTPN7-215ENST00000492451 CHGAP10645 457 aaKnown RBP20.48■□□□□ 0.87
PTPN7-215ENST00000492451 HDGFP51858 240 aaKnown RBP20.48■□□□□ 0.87
PTPN7-215ENST00000492451 MYO5BQ9ULV0 1848 aa20.47■□□□□ 0.87
PTPN7-215ENST00000492451 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
PTPN7-215ENST00000492451 PIP4K2BP78356 416 aa20.44■□□□□ 0.86
PTPN7-215ENST00000492451 ZFYVE9O95405 1425 aa20.44■□□□□ 0.86
PTPN7-215ENST00000492451 CLTCL1P53675 1640 aa20.43■□□□□ 0.86
PTPN7-215ENST00000492451 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.43■□□□□ 0.86
PTPN7-215ENST00000492451 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
PTPN7-215ENST00000492451 KIF1BO60333 1816 aa20.42■□□□□ 0.86
PTPN7-215ENST00000492451 RIMS2Q9UQ26 1411 aa20.42■□□□□ 0.86
PTPN7-215ENST00000492451 FOXD1Q16676 465 aa20.41■□□□□ 0.86
PTPN7-215ENST00000492451 TOM1O60784 492 aa20.4■□□□□ 0.86
PTPN7-215ENST00000492451 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
PTPN7-215ENST00000492451 PPP1R15AO75807 674 aaPredicted RBP20.39■□□□□ 0.85
PTPN7-215ENST00000492451 HSPA1LP34931 641 aa20.39■□□□□ 0.85
PTPN7-215ENST00000492451 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
PTPN7-215ENST00000492451 CCDC144AA2RUR9 1427 aa20.37■□□□□ 0.85
PTPN7-215ENST00000492451 ZNF326Q5BKZ1 582 aaKnown RBP20.37■□□□□ 0.85
PTPN7-215ENST00000492451 NUTM2DQ5VT03 806 aaPredicted RBP20.37■□□□□ 0.85
PTPN7-215ENST00000492451 XIRP1Q702N8 1843 aaKnown RBP20.37■□□□□ 0.85
PTPN7-215ENST00000492451 DISP3Q9P2K9 1392 aa20.35■□□□□ 0.85
PTPN7-215ENST00000492451 PLEKHG1Q9ULL1 1385 aa20.35■□□□□ 0.85
PTPN7-215ENST00000492451 RBM33Q96EV2 1170 aaKnown RBP20.35■□□□□ 0.85
PTPN7-215ENST00000492451 BCANQ96GW7 911 aa20.35■□□□□ 0.85
PTPN7-215ENST00000492451 KCNA6P17658 529 aa20.34■□□□□ 0.85
PTPN7-215ENST00000492451 ILDR2Q71H61 639 aa20.32■□□□□ 0.84
PTPN7-215ENST00000492451 TMEM94Q12767 1356 aa20.32■□□□□ 0.84
PTPN7-215ENST00000492451 RPGRIP1LQ68CZ1 1315 aa20.31■□□□□ 0.84
PTPN7-215ENST00000492451 NWD1Q149M9 1564 aa20.3■□□□□ 0.84
PTPN7-215ENST00000492451 ADAMTS13Q76LX8 1427 aa20.3■□□□□ 0.84
PTPN7-215ENST00000492451 NEXMIFQ5QGS0 1516 aa20.29■□□□□ 0.84
PTPN7-215ENST00000492451 ANKRD30BQ9BXX2 1392 aa20.27■□□□□ 0.84
PTPN7-215ENST00000492451 VGFO15240 615 aaPredicted RBP20.27■□□□□ 0.84
PTPN7-215ENST00000492451 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.84
PTPN7-215ENST00000492451 TBX22Q9Y458 520 aa20.27■□□□□ 0.84
PTPN7-215ENST00000492451 DIP2AQ14689 1571 aa20.26■□□□□ 0.83
PTPN7-215ENST00000492451 SPATA31E1Q6ZUB1 1445 aa20.26■□□□□ 0.83
PTPN7-215ENST00000492451 NKTRP30414 1462 aaKnown RBP20.25■□□□□ 0.83
PTPN7-215ENST00000492451 SETBP1Q9Y6X0 1596 aa20.24■□□□□ 0.83
PTPN7-215ENST00000492451 PPLO60437 1756 aa20.23■□□□□ 0.83
PTPN7-215ENST00000492451 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
PTPN7-215ENST00000492451 RGL3Q3MIN7 710 aa20.22■□□□□ 0.83
PTPN7-215ENST00000492451 PIK3R4Q99570 1358 aa20.21■□□□□ 0.83
PTPN7-215ENST00000492451 PTPRUQ92729 1446 aa20.21■□□□□ 0.83
PTPN7-215ENST00000492451 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
PTPN7-215ENST00000492451 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
PTPN7-215ENST00000492451 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
PTPN7-215ENST00000492451 FAM135BQ49AJ0 1406 aa20.17■□□□□ 0.82
PTPN7-215ENST00000492451 METP08581 1390 aa20.14■□□□□ 0.81
PTPN7-215ENST00000492451 MSH6P52701 1360 aa20.14■□□□□ 0.81
PTPN7-215ENST00000492451 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.81
PTPN7-215ENST00000492451 ROBO1Q9Y6N7 1651 aa20.13■□□□□ 0.81
PTPN7-215ENST00000492451 ADGRF5Q8IZF2 1346 aa20.12■□□□□ 0.81
PTPN7-215ENST00000492451 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
PTPN7-215ENST00000492451 MYOM2P54296 1465 aa20.11■□□□□ 0.81
PTPN7-215ENST00000492451 SLAIN2Q9P270 581 aa20.1■□□□□ 0.81
PTPN7-215ENST00000492451 XRN1Q8IZH2 1706 aaKnown RBP20.1■□□□□ 0.81
PTPN7-215ENST00000492451 SETD1AO15047 1707 aaKnown RBP20.09■□□□□ 0.81
PTPN7-215ENST00000492451 NCOA3Q9Y6Q9 1424 aa20.09■□□□□ 0.81
PTPN7-215ENST00000492451 DHX57Q6P158 1386 aaKnown RBP20.08■□□□□ 0.81
PTPN7-215ENST00000492451 PIK3C2GO75747 1445 aa20.08■□□□□ 0.8
PTPN7-215ENST00000492451 NRXN1Q9ULB1 1477 aa20.06■□□□□ 0.8
PTPN7-215ENST00000492451 C14orf37Q86TY3 774 aa20.06■□□□□ 0.8
PTPN7-215ENST00000492451 DCAF11Q8TEB1 546 aa20.06■□□□□ 0.8
PTPN7-215ENST00000492451 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.06■□□□□ 0.8
PTPN7-215ENST00000492451 SOCS7O14512 581 aa20.04■□□□□ 0.8
PTPN7-215ENST00000492451 C19orf44Q9H6X5 657 aa20.04■□□□□ 0.8
PTPN7-215ENST00000492451 LAMC1P11047 1609 aa20.04■□□□□ 0.8
PTPN7-215ENST00000492451 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
PTPN7-215ENST00000492451 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
PTPN7-215ENST00000492451 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.8
PTPN7-215ENST00000492451 PRAG1Q86YV5 1406 aa20.01■□□□□ 0.79
PTPN7-215ENST00000492451 CADPS2Q86UW7 1296 aa20■□□□□ 0.79
PTPN7-215ENST00000492451 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
PTPN7-215ENST00000492451 PTCH1Q13635 1447 aa20■□□□□ 0.79
PTPN7-215ENST00000492451 ATF3P18847 181 aa19.99■□□□□ 0.79
PTPN7-215ENST00000492451 LRPPRCP42704 1394 aaKnown RBP19.97■□□□□ 0.79
PTPN7-215ENST00000492451 ROBO2Q9HCK4 1378 aa19.97■□□□□ 0.79
PTPN7-215ENST00000492451 PHLPP1O60346 1717 aa19.97■□□□□ 0.79
PTPN7-215ENST00000492451 CFAP70Q5T0N1 1121 aa19.97■□□□□ 0.79
PTPN7-215ENST00000492451 SIN3AQ96ST3 1273 aa19.97■□□□□ 0.79
PTPN7-215ENST00000492451 PHF23Q9BUL5 403 aaPredicted RBP19.97■□□□□ 0.79
PTPN7-215ENST00000492451 COL16A1Q07092 1604 aaPredicted RBP19.97■□□□□ 0.79
PTPN7-215ENST00000492451 MST1RQ04912 1400 aa19.96■□□□□ 0.79
PTPN7-215ENST00000492451 NEUROD1Q13562 356 aa19.96■□□□□ 0.79
PTPN7-215ENST00000492451 TMEM132EQ6IEE7 984 aa19.96■□□□□ 0.79
PTPN7-215ENST00000492451 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
PTPN7-215ENST00000492451 ABCC11Q96J66 1382 aa19.95■□□□□ 0.79
PTPN7-215ENST00000492451 TECPR2O15040 1411 aa19.95■□□□□ 0.78
PTPN7-215ENST00000492451 DCCP43146 1447 aa19.95■□□□□ 0.78
PTPN7-215ENST00000492451 ADGRL3Q9HAR2 1447 aa19.95■□□□□ 0.78
PTPN7-215ENST00000492451 ASXL1Q8IXJ9 1541 aa19.95■□□□□ 0.78
PTPN7-215ENST00000492451 YTHDC2Q9H6S0 1430 aaKnown RBP19.94■□□□□ 0.78
PTPN7-215ENST00000492451 KNDC1Q76NI1 1749 aa19.94■□□□□ 0.78
PTPN7-215ENST00000492451 NALCNQ8IZF0 1738 aa19.94■□□□□ 0.78
PTPN7-215ENST00000492451 STK26Q9P289 416 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms