RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
SS18L1-204ENST00000491916 KIF1BO60333 1816 aa22.5■■□□□ 1.19
SS18L1-204ENST00000491916 NUTM2DQ5VT03 806 aaPredicted RBP22.49■■□□□ 1.19
SS18L1-204ENST00000491916 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
SS18L1-204ENST00000491916 PLEKHG1Q9ULL1 1385 aa22.49■■□□□ 1.19
SS18L1-204ENST00000491916 NEXMIFQ5QGS0 1516 aa22.48■■□□□ 1.19
SS18L1-204ENST00000491916 CERKQ8TCT0 537 aa22.48■■□□□ 1.19
SS18L1-204ENST00000491916 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
SS18L1-204ENST00000491916 SPATA31E1Q6ZUB1 1445 aa22.47■■□□□ 1.19
SS18L1-204ENST00000491916 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.46■■□□□ 1.19
SS18L1-204ENST00000491916 CCDC144AA2RUR9 1427 aa22.46■■□□□ 1.19
SS18L1-204ENST00000491916 HDGFP51858 240 aaKnown RBP22.45■■□□□ 1.18
SS18L1-204ENST00000491916 ADAMTS13Q76LX8 1427 aa22.44■■□□□ 1.18
SS18L1-204ENST00000491916 SLC26A8Q96RN1 970 aa22.44■■□□□ 1.18
SS18L1-204ENST00000491916 ZNF326Q5BKZ1 582 aaKnown RBP22.43■■□□□ 1.18
SS18L1-204ENST00000491916 NRXN3Q9Y4C0 1643 aa22.42■■□□□ 1.18
SS18L1-204ENST00000491916 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
SS18L1-204ENST00000491916 PPP1R15AO75807 674 aaPredicted RBP22.4■■□□□ 1.18
SS18L1-204ENST00000491916 RPGRIP1LQ68CZ1 1315 aa22.39■■□□□ 1.18
SS18L1-204ENST00000491916 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
SS18L1-204ENST00000491916 PPLO60437 1756 aa22.38■■□□□ 1.17
SS18L1-204ENST00000491916 CPS1P31327 1500 aa22.38■■□□□ 1.17
SS18L1-204ENST00000491916 TBX22Q9Y458 520 aa22.38■■□□□ 1.17
SS18L1-204ENST00000491916 IQSEC2Q5JU85 1478 aa22.35■■□□□ 1.17
SS18L1-204ENST00000491916 IFT172Q9UG01 1749 aa22.35■■□□□ 1.17
SS18L1-204ENST00000491916 RGL3Q3MIN7 710 aa22.35■■□□□ 1.17
SS18L1-204ENST00000491916 KCNA6P17658 529 aa22.34■■□□□ 1.17
SS18L1-204ENST00000491916 LRRC7Q96NW7 1537 aa22.34■■□□□ 1.17
SS18L1-204ENST00000491916 CHD2O14647 1828 aaKnown RBP22.34■■□□□ 1.17
SS18L1-204ENST00000491916 DIP2AQ14689 1571 aa22.33■■□□□ 1.17
SS18L1-204ENST00000491916 NWD1Q149M9 1564 aa22.33■■□□□ 1.17
SS18L1-204ENST00000491916 BCANQ96GW7 911 aa22.33■■□□□ 1.17
SS18L1-204ENST00000491916 VGFO15240 615 aaPredicted RBP22.32■■□□□ 1.16
SS18L1-204ENST00000491916 ADGRF5Q8IZF2 1346 aa22.31■■□□□ 1.16
SS18L1-204ENST00000491916 PTPRUQ92729 1446 aa22.31■■□□□ 1.16
SS18L1-204ENST00000491916 FBXO41Q8TF61 875 aa22.31■■□□□ 1.16
SS18L1-204ENST00000491916 ILDR1Q86SU0 546 aaPredicted RBP22.3■■□□□ 1.16
SS18L1-204ENST00000491916 XIRP1Q702N8 1843 aaKnown RBP22.29■■□□□ 1.16
SS18L1-204ENST00000491916 SETD1AO15047 1707 aaKnown RBP22.29■■□□□ 1.16
SS18L1-204ENST00000491916 METP08581 1390 aa22.29■■□□□ 1.16
SS18L1-204ENST00000491916 DHX57Q6P158 1386 aaKnown RBP22.29■■□□□ 1.16
SS18L1-204ENST00000491916 PIK3R4Q99570 1358 aa22.28■■□□□ 1.16
SS18L1-204ENST00000491916 ALKQ9UM73 1620 aa22.26■■□□□ 1.15
SS18L1-204ENST00000491916 NKTRP30414 1462 aaKnown RBP22.25■■□□□ 1.15
SS18L1-204ENST00000491916 NRXN1Q9ULB1 1477 aa22.25■■□□□ 1.15
SS18L1-204ENST00000491916 XRN1Q8IZH2 1706 aaKnown RBP22.23■■□□□ 1.15
SS18L1-204ENST00000491916 PIK3C2GO75747 1445 aa22.23■■□□□ 1.15
SS18L1-204ENST00000491916 MYOM2P54296 1465 aa22.22■■□□□ 1.15
SS18L1-204ENST00000491916 TMEM94Q12767 1356 aa22.22■■□□□ 1.15
SS18L1-204ENST00000491916 RBM33Q96EV2 1170 aaKnown RBP22.21■■□□□ 1.15
SS18L1-204ENST00000491916 AMOTL2Q9Y2J4 779 aa22.21■■□□□ 1.15
SS18L1-204ENST00000491916 PROSER2Q86WR7 435 aaPredicted RBP22.2■■□□□ 1.14
SS18L1-204ENST00000491916 PCGF6Q9BYE7 350 aa22.19■■□□□ 1.14
SS18L1-204ENST00000491916 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
SS18L1-204ENST00000491916 ASXL1Q8IXJ9 1541 aa22.17■■□□□ 1.14
SS18L1-204ENST00000491916 PRAG1Q86YV5 1406 aa22.15■■□□□ 1.14
SS18L1-204ENST00000491916 UBAP1LF5GYI3 381 aa22.15■■□□□ 1.14
SS18L1-204ENST00000491916 DCAF11Q8TEB1 546 aa22.15■■□□□ 1.14
SS18L1-204ENST00000491916 C14orf93Q9H972 538 aaKnown RBP22.15■■□□□ 1.14
SS18L1-204ENST00000491916 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.13
SS18L1-204ENST00000491916 CFAP70Q5T0N1 1121 aa22.12■■□□□ 1.13
SS18L1-204ENST00000491916 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
SS18L1-204ENST00000491916 TMEM132EQ6IEE7 984 aa22.11■■□□□ 1.13
SS18L1-204ENST00000491916 STAC3Q96MF2 364 aa22.11■■□□□ 1.13
SS18L1-204ENST00000491916 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
SS18L1-204ENST00000491916 PTCH1Q13635 1447 aa22.09■■□□□ 1.13
SS18L1-204ENST00000491916 TOM1O60784 492 aa22.09■■□□□ 1.13
SS18L1-204ENST00000491916 LRPPRCP42704 1394 aaKnown RBP22.08■■□□□ 1.12
SS18L1-204ENST00000491916 TECPR2O15040 1411 aa22.07■■□□□ 1.12
SS18L1-204ENST00000491916 L3MBTL2Q969R5 705 aa22.07■■□□□ 1.12
SS18L1-204ENST00000491916 ADGRB1O14514 1584 aa22.07■■□□□ 1.12
SS18L1-204ENST00000491916 LAMC1P11047 1609 aa22.06■■□□□ 1.12
SS18L1-204ENST00000491916 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
SS18L1-204ENST00000491916 ABCC11Q96J66 1382 aa22.06■■□□□ 1.12
SS18L1-204ENST00000491916 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
SS18L1-204ENST00000491916 YTHDC2Q9H6S0 1430 aaKnown RBP22.05■■□□□ 1.12
SS18L1-204ENST00000491916 MSH6P52701 1360 aa22.04■■□□□ 1.12
SS18L1-204ENST00000491916 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
SS18L1-204ENST00000491916 KNDC1Q76NI1 1749 aa22.03■■□□□ 1.12
SS18L1-204ENST00000491916 PIP4K2BP78356 416 aa22.03■■□□□ 1.12
SS18L1-204ENST00000491916 STK26Q9P289 416 aa22.02■■□□□ 1.12
SS18L1-204ENST00000491916 NALCNQ8IZF0 1738 aa22.01■■□□□ 1.11
SS18L1-204ENST00000491916 ADGRL3Q9HAR2 1447 aa22■■□□□ 1.11
SS18L1-204ENST00000491916 PLEKHH1Q9ULM0 1364 aa21.99■■□□□ 1.11
SS18L1-204ENST00000491916 WAPLQ7Z5K2 1190 aa21.99■■□□□ 1.11
SS18L1-204ENST00000491916 SIRT1Q96EB6 747 aa21.99■■□□□ 1.11
SS18L1-204ENST00000491916 DCCP43146 1447 aa21.98■■□□□ 1.11
SS18L1-204ENST00000491916 FAM135BQ49AJ0 1406 aa21.97■■□□□ 1.11
SS18L1-204ENST00000491916 SLAIN2Q9P270 581 aa21.97■■□□□ 1.11
SS18L1-204ENST00000491916 KIAA1210Q9ULL0 1709 aa21.97■■□□□ 1.11
SS18L1-204ENST00000491916 C14orf37Q86TY3 774 aa21.96■■□□□ 1.11
SS18L1-204ENST00000491916 NBPF1Q3BBV0 1214 aa21.95■■□□□ 1.1
SS18L1-204ENST00000491916 CADPS2Q86UW7 1296 aa21.95■■□□□ 1.1
SS18L1-204ENST00000491916 DLC1Q96QB1 1528 aa21.95■■□□□ 1.1
SS18L1-204ENST00000491916 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
SS18L1-204ENST00000491916 HSPA1LP34931 641 aa21.93■■□□□ 1.1
SS18L1-204ENST00000491916 MST1RQ04912 1400 aa21.93■■□□□ 1.1
SS18L1-204ENST00000491916 ROBO1Q9Y6N7 1651 aa21.92■■□□□ 1.1
SS18L1-204ENST00000491916 ATF3P18847 181 aa21.92■■□□□ 1.1
SS18L1-204ENST00000491916 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms