RNA–Protein interactions for RNA: ENST00000491712.2

SPTAN1-208, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-208ENST00000491712 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
SPTAN1-208ENST00000491712 ZFYVE9O95405 1425 aa20.36■□□□□ 0.85
SPTAN1-208ENST00000491712 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
SPTAN1-208ENST00000491712 PLEKHG1Q9ULL1 1385 aa20.35■□□□□ 0.85
SPTAN1-208ENST00000491712 SLC26A8Q96RN1 970 aa20.35■□□□□ 0.85
SPTAN1-208ENST00000491712 SPHKAPQ2M3C7 1700 aa20.34■□□□□ 0.85
SPTAN1-208ENST00000491712 KCNA6P17658 529 aa20.34■□□□□ 0.85
SPTAN1-208ENST00000491712 NKTRP30414 1462 aaKnown RBP20.33■□□□□ 0.85
SPTAN1-208ENST00000491712 NAIPQ13075 1403 aa20.33■□□□□ 0.84
SPTAN1-208ENST00000491712 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
SPTAN1-208ENST00000491712 HFM1A2PYH4 1435 aa20.31■□□□□ 0.84
SPTAN1-208ENST00000491712 XIRP1Q702N8 1843 aaKnown RBP20.3■□□□□ 0.84
SPTAN1-208ENST00000491712 HSPA1LP34931 641 aa20.3■□□□□ 0.84
SPTAN1-208ENST00000491712 ALKQ9UM73 1620 aa20.3■□□□□ 0.84
SPTAN1-208ENST00000491712 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
SPTAN1-208ENST00000491712 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
SPTAN1-208ENST00000491712 TMEM94Q12767 1356 aa20.28■□□□□ 0.84
SPTAN1-208ENST00000491712 CHD2O14647 1828 aaKnown RBP20.25■□□□□ 0.83
SPTAN1-208ENST00000491712 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
SPTAN1-208ENST00000491712 TBX22Q9Y458 520 aa20.25■□□□□ 0.83
SPTAN1-208ENST00000491712 TRPM2O94759 1503 aa20.25■□□□□ 0.83
SPTAN1-208ENST00000491712 MSH6P52701 1360 aa20.23■□□□□ 0.83
SPTAN1-208ENST00000491712 PIK3R4Q99570 1358 aa20.23■□□□□ 0.83
SPTAN1-208ENST00000491712 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
SPTAN1-208ENST00000491712 SENP3Q9H4L4 574 aaPredicted RBP20.23■□□□□ 0.83
SPTAN1-208ENST00000491712 KIF1BO60333 1816 aa20.22■□□□□ 0.83
SPTAN1-208ENST00000491712 NUTM2DQ5VT03 806 aaPredicted RBP20.21■□□□□ 0.83
SPTAN1-208ENST00000491712 CLTCL1P53675 1640 aa20.2■□□□□ 0.82
SPTAN1-208ENST00000491712 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
SPTAN1-208ENST00000491712 SLC4A1APQ9BWU0 796 aaKnown RBP20.19■□□□□ 0.82
SPTAN1-208ENST00000491712 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
SPTAN1-208ENST00000491712 NCOA3Q9Y6Q9 1424 aa20.19■□□□□ 0.82
SPTAN1-208ENST00000491712 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
SPTAN1-208ENST00000491712 SETBP1Q9Y6X0 1596 aa20.17■□□□□ 0.82
SPTAN1-208ENST00000491712 C14orf37Q86TY3 774 aa20.16■□□□□ 0.82
SPTAN1-208ENST00000491712 RBM33Q96EV2 1170 aaKnown RBP20.16■□□□□ 0.82
SPTAN1-208ENST00000491712 ACIN1Q9UKV3 1341 aaKnown RBP20.16■□□□□ 0.82
SPTAN1-208ENST00000491712 ROBO1Q9Y6N7 1651 aa20.14■□□□□ 0.81
SPTAN1-208ENST00000491712 NEXMIFQ5QGS0 1516 aa20.12■□□□□ 0.81
SPTAN1-208ENST00000491712 ILDR2Q71H61 639 aa20.12■□□□□ 0.81
SPTAN1-208ENST00000491712 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
SPTAN1-208ENST00000491712 NRXN3Q9Y4C0 1643 aa20.11■□□□□ 0.81
SPTAN1-208ENST00000491712 SLAIN2Q9P270 581 aa20.1■□□□□ 0.81
SPTAN1-208ENST00000491712 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
SPTAN1-208ENST00000491712 CADPS2Q86UW7 1296 aa20.09■□□□□ 0.81
SPTAN1-208ENST00000491712 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.81
SPTAN1-208ENST00000491712 VGFO15240 615 aaPredicted RBP20.08■□□□□ 0.81
SPTAN1-208ENST00000491712 ATF3P18847 181 aa20.08■□□□□ 0.81
SPTAN1-208ENST00000491712 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.81
SPTAN1-208ENST00000491712 XRN1Q8IZH2 1706 aaKnown RBP20.07■□□□□ 0.8
SPTAN1-208ENST00000491712 SOCS7O14512 581 aa20.07■□□□□ 0.8
SPTAN1-208ENST00000491712 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
SPTAN1-208ENST00000491712 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.06■□□□□ 0.8
SPTAN1-208ENST00000491712 PTPRUQ92729 1446 aa20.05■□□□□ 0.8
SPTAN1-208ENST00000491712 DCCP43146 1447 aa20.04■□□□□ 0.8
SPTAN1-208ENST00000491712 PHLPP1O60346 1717 aa20.04■□□□□ 0.8
SPTAN1-208ENST00000491712 METP08581 1390 aa20.03■□□□□ 0.8
SPTAN1-208ENST00000491712 MPHOSPH9Q99550 1183 aa20.02■□□□□ 0.8
SPTAN1-208ENST00000491712 PPLO60437 1756 aa20.02■□□□□ 0.8
SPTAN1-208ENST00000491712 SETD5Q9C0A6 1442 aa20.01■□□□□ 0.79
SPTAN1-208ENST00000491712 FOXD1Q16676 465 aa19.99■□□□□ 0.79
SPTAN1-208ENST00000491712 JCADQ9P266 1359 aa19.96■□□□□ 0.79
SPTAN1-208ENST00000491712 PTCH1Q13635 1447 aa19.96■□□□□ 0.79
SPTAN1-208ENST00000491712 ADGRL3Q9HAR2 1447 aa19.96■□□□□ 0.79
SPTAN1-208ENST00000491712 SETD1AO15047 1707 aaKnown RBP19.96■□□□□ 0.79
SPTAN1-208ENST00000491712 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.79
SPTAN1-208ENST00000491712 AHDC1Q5TGY3 1603 aaPredicted RBP19.95■□□□□ 0.78
SPTAN1-208ENST00000491712 COL16A1Q07092 1604 aaPredicted RBP19.94■□□□□ 0.78
SPTAN1-208ENST00000491712 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
SPTAN1-208ENST00000491712 PRAG1Q86YV5 1406 aa19.93■□□□□ 0.78
SPTAN1-208ENST00000491712 RGL3Q3MIN7 710 aa19.92■□□□□ 0.78
SPTAN1-208ENST00000491712 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
SPTAN1-208ENST00000491712 SPATA31E1Q6ZUB1 1445 aa19.92■□□□□ 0.78
SPTAN1-208ENST00000491712 IFT172Q9UG01 1749 aa19.91■□□□□ 0.78
SPTAN1-208ENST00000491712 MST1RQ04912 1400 aa19.91■□□□□ 0.78
SPTAN1-208ENST00000491712 BRINP3Q76B58 766 aa19.9■□□□□ 0.78
SPTAN1-208ENST00000491712 ASXL1Q8IXJ9 1541 aa19.9■□□□□ 0.78
SPTAN1-208ENST00000491712 SPATA31A6Q5VVP1 1343 aa19.89■□□□□ 0.77
SPTAN1-208ENST00000491712 SHPRHQ149N8 1683 aa19.87■□□□□ 0.77
SPTAN1-208ENST00000491712 ROBO2Q9HCK4 1378 aa19.86■□□□□ 0.77
SPTAN1-208ENST00000491712 ADGRF5Q8IZF2 1346 aa19.86■□□□□ 0.77
SPTAN1-208ENST00000491712 NHSL1Q5SYE7 1610 aa19.85■□□□□ 0.77
SPTAN1-208ENST00000491712 PIK3C2GO75747 1445 aa19.85■□□□□ 0.77
SPTAN1-208ENST00000491712 MEX3CQ5U5Q3 659 aaKnown RBP19.83■□□□□ 0.77
SPTAN1-208ENST00000491712 LAMC1P11047 1609 aa19.83■□□□□ 0.76
SPTAN1-208ENST00000491712 C1orf167Q5SNV9 1468 aa19.82■□□□□ 0.76
SPTAN1-208ENST00000491712 MYOM2P54296 1465 aa19.81■□□□□ 0.76
SPTAN1-208ENST00000491712 HRCP23327 699 aa19.81■□□□□ 0.76
SPTAN1-208ENST00000491712 LRRC59Q96AG4 307 aaKnown RBP19.81■□□□□ 0.76
SPTAN1-208ENST00000491712 RGS17Q9UGC6 210 aaPredicted RBP19.81■□□□□ 0.76
SPTAN1-208ENST00000491712 TECPR2O15040 1411 aa19.81■□□□□ 0.76
SPTAN1-208ENST00000491712 KNDC1Q76NI1 1749 aa19.81■□□□□ 0.76
SPTAN1-208ENST00000491712 CDC42BPGQ6DT37 1551 aa19.8■□□□□ 0.76
SPTAN1-208ENST00000491712 LRPPRCP42704 1394 aaKnown RBP19.8■□□□□ 0.76
SPTAN1-208ENST00000491712 STK26Q9P289 416 aa19.78■□□□□ 0.76
SPTAN1-208ENST00000491712 ABCC11Q96J66 1382 aa19.78■□□□□ 0.76
SPTAN1-208ENST00000491712 NRXN1Q9ULB1 1477 aa19.76■□□□□ 0.75
SPTAN1-208ENST00000491712 LRP6O75581 1613 aa19.76■□□□□ 0.75
SPTAN1-208ENST00000491712 YTHDC2Q9H6S0 1430 aaKnown RBP19.76■□□□□ 0.75
SPTAN1-208ENST00000491712 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms