RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 CHGAP10645 457 aaKnown RBP19.68■□□□□ 0.74
NUP188-208ENST00000491502 CPS1P31327 1500 aa19.66■□□□□ 0.74
NUP188-208ENST00000491502 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
NUP188-208ENST00000491502 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
NUP188-208ENST00000491502 TMEM131LA2VDJ0 1609 aa19.64■□□□□ 0.73
NUP188-208ENST00000491502 RIMS2Q9UQ26 1411 aa19.62■□□□□ 0.73
NUP188-208ENST00000491502 PPP1R15AO75807 674 aaPredicted RBP19.62■□□□□ 0.73
NUP188-208ENST00000491502 BCANQ96GW7 911 aa19.61■□□□□ 0.73
NUP188-208ENST00000491502 SPHKAPQ2M3C7 1700 aa19.61■□□□□ 0.73
NUP188-208ENST00000491502 ZFYVE9O95405 1425 aa19.6■□□□□ 0.73
NUP188-208ENST00000491502 MYO5BQ9ULV0 1848 aa19.6■□□□□ 0.73
NUP188-208ENST00000491502 UBAP1LF5GYI3 381 aa19.58■□□□□ 0.72
NUP188-208ENST00000491502 PLEKHG1Q9ULL1 1385 aa19.57■□□□□ 0.72
NUP188-208ENST00000491502 SLC26A8Q96RN1 970 aa19.57■□□□□ 0.72
NUP188-208ENST00000491502 TRPM2O94759 1503 aa19.56■□□□□ 0.72
NUP188-208ENST00000491502 TOM1O60784 492 aa19.55■□□□□ 0.72
NUP188-208ENST00000491502 KCNA6P17658 529 aa19.55■□□□□ 0.72
NUP188-208ENST00000491502 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
NUP188-208ENST00000491502 MPHOSPH9Q99550 1183 aa19.55■□□□□ 0.72
NUP188-208ENST00000491502 TBX22Q9Y458 520 aa19.54■□□□□ 0.72
NUP188-208ENST00000491502 TIMELESSQ9UNS1 1208 aa19.52■□□□□ 0.72
NUP188-208ENST00000491502 STRCP1A6NGW2 1772 aa19.52■□□□□ 0.71
NUP188-208ENST00000491502 LRRC7Q96NW7 1537 aa19.51■□□□□ 0.71
NUP188-208ENST00000491502 NUTM2DQ5VT03 806 aaPredicted RBP19.51■□□□□ 0.71
NUP188-208ENST00000491502 CLTCL1P53675 1640 aa19.51■□□□□ 0.71
NUP188-208ENST00000491502 KIF1BO60333 1816 aa19.5■□□□□ 0.71
NUP188-208ENST00000491502 RPGRIP1LQ68CZ1 1315 aa19.48■□□□□ 0.71
NUP188-208ENST00000491502 FOXD1Q16676 465 aa19.47■□□□□ 0.71
NUP188-208ENST00000491502 PROSER2Q86WR7 435 aaPredicted RBP19.47■□□□□ 0.71
NUP188-208ENST00000491502 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
NUP188-208ENST00000491502 PIK3R4Q99570 1358 aa19.46■□□□□ 0.71
NUP188-208ENST00000491502 VGFO15240 615 aaPredicted RBP19.46■□□□□ 0.71
NUP188-208ENST00000491502 DIP2AQ14689 1571 aa19.45■□□□□ 0.7
NUP188-208ENST00000491502 ADAMTS13Q76LX8 1427 aa19.44■□□□□ 0.7
NUP188-208ENST00000491502 NKTRP30414 1462 aaKnown RBP19.44■□□□□ 0.7
NUP188-208ENST00000491502 CCDC144AA2RUR9 1427 aa19.43■□□□□ 0.7
NUP188-208ENST00000491502 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
NUP188-208ENST00000491502 CHD2O14647 1828 aaKnown RBP19.42■□□□□ 0.7
NUP188-208ENST00000491502 NWD1Q149M9 1564 aa19.42■□□□□ 0.7
NUP188-208ENST00000491502 PIP4K2BP78356 416 aa19.42■□□□□ 0.7
NUP188-208ENST00000491502 TMEM94Q12767 1356 aa19.42■□□□□ 0.7
NUP188-208ENST00000491502 NEXMIFQ5QGS0 1516 aa19.41■□□□□ 0.7
NUP188-208ENST00000491502 NEUROD1Q13562 356 aa19.39■□□□□ 0.69
NUP188-208ENST00000491502 SETBP1Q9Y6X0 1596 aa19.39■□□□□ 0.69
NUP188-208ENST00000491502 AMOTL2Q9Y2J4 779 aa19.38■□□□□ 0.69
NUP188-208ENST00000491502 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
NUP188-208ENST00000491502 NCOA3Q9Y6Q9 1424 aa19.37■□□□□ 0.69
NUP188-208ENST00000491502 TONSLQ96HA7 1378 aa19.35■□□□□ 0.69
NUP188-208ENST00000491502 ANKRD30BQ9BXX2 1392 aa19.35■□□□□ 0.69
NUP188-208ENST00000491502 RGL3Q3MIN7 710 aa19.35■□□□□ 0.69
NUP188-208ENST00000491502 SIN3AQ96ST3 1273 aa19.35■□□□□ 0.69
NUP188-208ENST00000491502 MSH6P52701 1360 aa19.34■□□□□ 0.69
NUP188-208ENST00000491502 NRXN3Q9Y4C0 1643 aa19.34■□□□□ 0.69
NUP188-208ENST00000491502 RBM33Q96EV2 1170 aaKnown RBP19.34■□□□□ 0.69
NUP188-208ENST00000491502 SPATA31E1Q6ZUB1 1445 aa19.34■□□□□ 0.69
NUP188-208ENST00000491502 ALKQ9UM73 1620 aa19.33■□□□□ 0.69
NUP188-208ENST00000491502 C14orf37Q86TY3 774 aa19.32■□□□□ 0.68
NUP188-208ENST00000491502 PTPRUQ92729 1446 aa19.32■□□□□ 0.68
NUP188-208ENST00000491502 PPLO60437 1756 aa19.32■□□□□ 0.68
NUP188-208ENST00000491502 METP08581 1390 aa19.32■□□□□ 0.68
NUP188-208ENST00000491502 HSPA1LP34931 641 aa19.31■□□□□ 0.68
NUP188-208ENST00000491502 C19orf44Q9H6X5 657 aa19.3■□□□□ 0.68
NUP188-208ENST00000491502 FAM135BQ49AJ0 1406 aa19.29■□□□□ 0.68
NUP188-208ENST00000491502 CADPS2Q86UW7 1296 aa19.27■□□□□ 0.68
NUP188-208ENST00000491502 SLAIN2Q9P270 581 aa19.27■□□□□ 0.68
NUP188-208ENST00000491502 ADGRF5Q8IZF2 1346 aa19.26■□□□□ 0.67
NUP188-208ENST00000491502 ATF3P18847 181 aa19.26■□□□□ 0.67
NUP188-208ENST00000491502 XRN1Q8IZH2 1706 aaKnown RBP19.25■□□□□ 0.67
NUP188-208ENST00000491502 IFT172Q9UG01 1749 aa19.22■□□□□ 0.67
NUP188-208ENST00000491502 STAC3Q96MF2 364 aa19.22■□□□□ 0.67
NUP188-208ENST00000491502 SETD1AO15047 1707 aaKnown RBP19.21■□□□□ 0.67
NUP188-208ENST00000491502 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
NUP188-208ENST00000491502 DCCP43146 1447 aa19.2■□□□□ 0.66
NUP188-208ENST00000491502 PTCH1Q13635 1447 aa19.19■□□□□ 0.66
NUP188-208ENST00000491502 PIK3C2GO75747 1445 aa19.18■□□□□ 0.66
NUP188-208ENST00000491502 PRAG1Q86YV5 1406 aa19.18■□□□□ 0.66
NUP188-208ENST00000491502 C14orf93Q9H972 538 aaKnown RBP19.18■□□□□ 0.66
NUP188-208ENST00000491502 MYOM2P54296 1465 aa19.17■□□□□ 0.66
NUP188-208ENST00000491502 ROBO1Q9Y6N7 1651 aa19.17■□□□□ 0.66
NUP188-208ENST00000491502 DISP3Q9P2K9 1392 aa19.17■□□□□ 0.66
NUP188-208ENST00000491502 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
NUP188-208ENST00000491502 ROBO2Q9HCK4 1378 aa19.16■□□□□ 0.66
NUP188-208ENST00000491502 NRXN1Q9ULB1 1477 aa19.16■□□□□ 0.66
NUP188-208ENST00000491502 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
NUP188-208ENST00000491502 LRPPRCP42704 1394 aaKnown RBP19.15■□□□□ 0.66
NUP188-208ENST00000491502 L3MBTL2Q969R5 705 aa19.14■□□□□ 0.65
NUP188-208ENST00000491502 STK26Q9P289 416 aa19.14■□□□□ 0.65
NUP188-208ENST00000491502 ABCC11Q96J66 1382 aa19.14■□□□□ 0.65
NUP188-208ENST00000491502 TMEM132EQ6IEE7 984 aa19.13■□□□□ 0.65
NUP188-208ENST00000491502 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
NUP188-208ENST00000491502 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
NUP188-208ENST00000491502 CFAP70Q5T0N1 1121 aa19.12■□□□□ 0.65
NUP188-208ENST00000491502 TECPR2O15040 1411 aa19.11■□□□□ 0.65
NUP188-208ENST00000491502 LAMC1P11047 1609 aa19.11■□□□□ 0.65
NUP188-208ENST00000491502 YTHDC2Q9H6S0 1430 aaKnown RBP19.1■□□□□ 0.65
NUP188-208ENST00000491502 MST1RQ04912 1400 aa19.09■□□□□ 0.65
NUP188-208ENST00000491502 ZNF316A6NFI3 1004 aaPredicted RBP19.09■□□□□ 0.65
NUP188-208ENST00000491502 BRINP3Q76B58 766 aa19.09■□□□□ 0.65
NUP188-208ENST00000491502 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.64
NUP188-208ENST00000491502 WAPLQ7Z5K2 1190 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 1039.1 ms