RNA–Protein interactions for RNA: ENST00000491472.2

EBF4-208, Transcript of early B cell factor 4, human

TSL 5

Gene EBF4, Length 665 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EBF4-208	ENST00000491472	CHGA	P10645	457 aa	Known RBP	34.14	■■■■□ 3.06
EBF4-208	ENST00000491472	PLEKHG1	Q9ULL1	1385 aa		34.11	■■■■□ 3.05
EBF4-208	ENST00000491472	PPP1R15A	O75807	674 aa	Predicted RBP	34.1	■■■■□ 3.05
EBF4-208	ENST00000491472	BCAN	Q96GW7	911 aa		34.09	■■■■□ 3.05
EBF4-208	ENST00000491472	SLC26A8	Q96RN1	970 aa		34.08	■■■■□ 3.05
EBF4-208	ENST00000491472	KCNA6	P17658	529 aa		34.07	■■■■□ 3.04
EBF4-208	ENST00000491472	TRIM52	Q96A61	297 aa		34.07	■■■■□ 3.04
EBF4-208	ENST00000491472	TRPM2	O94759	1503 aa		34.01	■■■■□ 3.04
EBF4-208	ENST00000491472	ACIN1	Q9UKV3	1341 aa	Known RBP	34.01	■■■■□ 3.03
EBF4-208	ENST00000491472	TBX22	Q9Y458	520 aa		34	■■■■□ 3.03
EBF4-208	ENST00000491472	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.98	■■■■□ 3.03
EBF4-208	ENST00000491472	NWD1	Q149M9	1564 aa		33.98	■■■■□ 3.03
EBF4-208	ENST00000491472	NKTR	P30414	1462 aa	Known RBP	33.97	■■■■□ 3.03
EBF4-208	ENST00000491472	PIP4K2B	P78356	416 aa		33.97	■■■■□ 3.03
EBF4-208	ENST00000491472	SCAF1	Q9H7N4	1312 aa	Known RBP	33.97	■■■■□ 3.03
EBF4-208	ENST00000491472	DIP2A	Q14689	1571 aa		33.95	■■■■□ 3.03
EBF4-208	ENST00000491472	XIRP1	Q702N8	1843 aa	Known RBP	33.95	■■■■□ 3.02
EBF4-208	ENST00000491472	ALK	Q9UM73	1620 aa		33.93	■■■■□ 3.02
EBF4-208	ENST00000491472	CHD2	O14647	1828 aa	Known RBP	33.93	■■■■□ 3.02
EBF4-208	ENST00000491472	PROSER2	Q86WR7	435 aa	Predicted RBP	33.93	■■■■□ 3.02
EBF4-208	ENST00000491472	CLTCL1	P53675	1640 aa		33.93	■■■■□ 3.02
EBF4-208	ENST00000491472	KIF1B	O60333	1816 aa		33.92	■■■■□ 3.02
EBF4-208	ENST00000491472	TMEM94	Q12767	1356 aa		33.91	■■■■□ 3.02
EBF4-208	ENST00000491472	PIK3R4	Q99570	1358 aa		33.9	■■■■□ 3.02
EBF4-208	ENST00000491472	ZNF326	Q5BKZ1	582 aa	Known RBP	33.9	■■■■□ 3.02
EBF4-208	ENST00000491472	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.9	■■■■□ 3.02
EBF4-208	ENST00000491472	ADAMTS13	Q76LX8	1427 aa		33.88	■■■■□ 3.01
EBF4-208	ENST00000491472	SENP3	Q9H4L4	574 aa	Predicted RBP	33.86	■■■■□ 3.01
EBF4-208	ENST00000491472	HSPA1L	P34931	641 aa		33.84	■■■■□ 3.01
EBF4-208	ENST00000491472	SETD5	Q9C0A6	1442 aa		33.82	■■■■□ 3
EBF4-208	ENST00000491472	SETBP1	Q9Y6X0	1596 aa		33.81	■■■■□ 3
EBF4-208	ENST00000491472	NCOA3	Q9Y6Q9	1424 aa		33.8	■■■■□ 3
EBF4-208	ENST00000491472	NEXMIF	Q5QGS0	1516 aa		33.79	■■■■□ 3
EBF4-208	ENST00000491472	MPHOSPH9	Q99550	1183 aa		33.79	■■■■□ 3
EBF4-208	ENST00000491472	RPGRIP1L	Q68CZ1	1315 aa		33.78	■■■■□ 3
EBF4-208	ENST00000491472	MSH6	P52701	1360 aa		33.76	■■■■□ 3
EBF4-208	ENST00000491472	NRXN3	Q9Y4C0	1643 aa		33.75	■■■□□ 2.99
EBF4-208	ENST00000491472	DISP3	Q9P2K9	1392 aa		33.75	■■■□□ 2.99
EBF4-208	ENST00000491472	VGF	O15240	615 aa	Predicted RBP	33.74	■■■□□ 2.99
EBF4-208	ENST00000491472	FAM135B	Q49AJ0	1406 aa		33.73	■■■□□ 2.99
EBF4-208	ENST00000491472	RBM33	Q96EV2	1170 aa	Known RBP	33.71	■■■□□ 2.99
EBF4-208	ENST00000491472	AMOTL2	Q9Y2J4	779 aa		33.71	■■■□□ 2.99
EBF4-208	ENST00000491472	CCDC144A	A2RUR9	1427 aa		33.7	■■■□□ 2.99
EBF4-208	ENST00000491472	FOXD1	Q16676	465 aa		33.69	■■■□□ 2.98
EBF4-208	ENST00000491472	PTPRU	Q92729	1446 aa		33.66	■■■□□ 2.98
EBF4-208	ENST00000491472	RAB3GAP2	Q9H2M9	1393 aa		33.64	■■■□□ 2.98
EBF4-208	ENST00000491472	XRN1	Q8IZH2	1706 aa	Known RBP	33.63	■■■□□ 2.97
EBF4-208	ENST00000491472	C14orf37	Q86TY3	774 aa		33.63	■■■□□ 2.97
EBF4-208	ENST00000491472	C19orf44	Q9H6X5	657 aa		33.63	■■■□□ 2.97
EBF4-208	ENST00000491472	PPL	O60437	1756 aa		33.62	■■■□□ 2.97
EBF4-208	ENST00000491472	SLAIN2	Q9P270	581 aa		33.62	■■■□□ 2.97
EBF4-208	ENST00000491472	MET	P08581	1390 aa		33.6	■■■□□ 2.97
EBF4-208	ENST00000491472	HRC	P23327	699 aa		33.59	■■■□□ 2.97
EBF4-208	ENST00000491472	ROBO1	Q9Y6N7	1651 aa		33.58	■■■□□ 2.97
EBF4-208	ENST00000491472	CADPS2	Q86UW7	1296 aa		33.58	■■■□□ 2.97
EBF4-208	ENST00000491472	SPATA31E1	Q6ZUB1	1445 aa		33.57	■■■□□ 2.96
EBF4-208	ENST00000491472	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.56	■■■□□ 2.96
EBF4-208	ENST00000491472	ATF3	P18847	181 aa		33.55	■■■□□ 2.96
EBF4-208	ENST00000491472	ANKRD30B	Q9BXX2	1392 aa		33.54	■■■□□ 2.96
EBF4-208	ENST00000491472	DCC	P43146	1447 aa		33.52	■■■□□ 2.96
EBF4-208	ENST00000491472	SETD1A	O15047	1707 aa	Known RBP	33.51	■■■□□ 2.96
EBF4-208	ENST00000491472	MED1	Q15648	1581 aa	Predicted RBP	33.51	■■■□□ 2.95
EBF4-208	ENST00000491472	RGL3	Q3MIN7	710 aa		33.5	■■■□□ 2.95
EBF4-208	ENST00000491472	IFT172	Q9UG01	1749 aa		33.48	■■■□□ 2.95
EBF4-208	ENST00000491472	PRAG1	Q86YV5	1406 aa		33.46	■■■□□ 2.95
EBF4-208	ENST00000491472	PTCH1	Q13635	1447 aa		33.45	■■■□□ 2.94
EBF4-208	ENST00000491472	ADGRF5	Q8IZF2	1346 aa		33.42	■■■□□ 2.94
EBF4-208	ENST00000491472	ADGRL3	Q9HAR2	1447 aa		33.42	■■■□□ 2.94
EBF4-208	ENST00000491472	ILDR2	Q71H61	639 aa		33.39	■■■□□ 2.94
EBF4-208	ENST00000491472	PHLPP1	O60346	1717 aa		33.39	■■■□□ 2.94
EBF4-208	ENST00000491472	PIK3C2G	O75747	1445 aa		33.35	■■■□□ 2.93
EBF4-208	ENST00000491472	ROBO2	Q9HCK4	1378 aa		33.34	■■■□□ 2.93
EBF4-208	ENST00000491472	NALCN	Q8IZF0	1738 aa		33.33	■■■□□ 2.93
EBF4-208	ENST00000491472	PHF23	Q9BUL5	403 aa	Predicted RBP	33.33	■■■□□ 2.93
EBF4-208	ENST00000491472	MST1R	Q04912	1400 aa		33.32	■■■□□ 2.92
EBF4-208	ENST00000491472	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.31	■■■□□ 2.92
EBF4-208	ENST00000491472	MYOM2	P54296	1465 aa		33.31	■■■□□ 2.92
EBF4-208	ENST00000491472	BRINP3	Q76B58	766 aa		33.3	■■■□□ 2.92
EBF4-208	ENST00000491472	JCAD	Q9P266	1359 aa		33.3	■■■□□ 2.92
EBF4-208	ENST00000491472	COL16A1	Q07092	1604 aa	Predicted RBP	33.29	■■■□□ 2.92
EBF4-208	ENST00000491472	NRXN1	Q9ULB1	1477 aa		33.29	■■■□□ 2.92
EBF4-208	ENST00000491472	TECPR2	O15040	1411 aa		33.28	■■■□□ 2.92
EBF4-208	ENST00000491472	LRPPRC	P42704	1394 aa	Known RBP	33.27	■■■□□ 2.92
EBF4-208	ENST00000491472	ABCC11	Q96J66	1382 aa		33.26	■■■□□ 2.92
EBF4-208	ENST00000491472	C14orf93	Q9H972	538 aa	Known RBP	33.26	■■■□□ 2.91
EBF4-208	ENST00000491472	LAMC1	P11047	1609 aa		33.25	■■■□□ 2.91
EBF4-208	ENST00000491472	STAC3	Q96MF2	364 aa		33.25	■■■□□ 2.91
EBF4-208	ENST00000491472	ASXL1	Q8IXJ9	1541 aa		33.24	■■■□□ 2.91
EBF4-208	ENST00000491472	KNDC1	Q76NI1	1749 aa		33.22	■■■□□ 2.91
EBF4-208	ENST00000491472	SOCS7	O14512	581 aa		33.21	■■■□□ 2.91
EBF4-208	ENST00000491472	TMEM132E	Q6IEE7	984 aa		33.2	■■■□□ 2.91
EBF4-208	ENST00000491472	STK26	Q9P289	416 aa		33.2	■■■□□ 2.91
EBF4-208	ENST00000491472	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.19	■■■□□ 2.9
EBF4-208	ENST00000491472	SIRT1	Q96EB6	747 aa		33.19	■■■□□ 2.9
EBF4-208	ENST00000491472	C1orf167	Q5SNV9	1468 aa		33.18	■■■□□ 2.9
EBF4-208	ENST00000491472	NHSL1	Q5SYE7	1610 aa		33.18	■■■□□ 2.9
EBF4-208	ENST00000491472	SPATA31A6	Q5VVP1	1343 aa		33.17	■■■□□ 2.9
EBF4-208	ENST00000491472	DHX57	Q6P158	1386 aa	Known RBP	33.17	■■■□□ 2.9
EBF4-208	ENST00000491472	SHPRH	Q149N8	1683 aa		33.15	■■■□□ 2.9
EBF4-208	ENST00000491472	CDC42BPG	Q6DT37	1551 aa		33.15	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms