RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 PHLPP1O60346 1717 aa13.23□□□□□ -0.29
PCOLCE-209ENST00000490909 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
PCOLCE-209ENST00000490909 COL16A1Q07092 1604 aaPredicted RBP13.22□□□□□ -0.29
PCOLCE-209ENST00000490909 RGS17Q9UGC6 210 aaPredicted RBP13.21□□□□□ -0.29
PCOLCE-209ENST00000490909 EID1Q9Y6B2 187 aa13.21□□□□□ -0.29
PCOLCE-209ENST00000490909 NRXN3Q9Y4C0 1643 aa13.21□□□□□ -0.3
PCOLCE-209ENST00000490909 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
PCOLCE-209ENST00000490909 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
PCOLCE-209ENST00000490909 SLC26A8Q96RN1 970 aa13.2□□□□□ -0.3
PCOLCE-209ENST00000490909 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
PCOLCE-209ENST00000490909 RIMS2Q9UQ26 1411 aa13.19□□□□□ -0.3
PCOLCE-209ENST00000490909 PLEKHG1Q9ULL1 1385 aa13.19□□□□□ -0.3
PCOLCE-209ENST00000490909 KCNA6P17658 529 aa13.18□□□□□ -0.3
PCOLCE-209ENST00000490909 APLP2Q06481 763 aa13.18□□□□□ -0.3
PCOLCE-209ENST00000490909 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
PCOLCE-209ENST00000490909 ADAMTS13Q76LX8 1427 aa13.18□□□□□ -0.3
PCOLCE-209ENST00000490909 SPHKAPQ2M3C7 1700 aa13.18□□□□□ -0.3
PCOLCE-209ENST00000490909 XRN1Q8IZH2 1706 aaKnown RBP13.18□□□□□ -0.3
PCOLCE-209ENST00000490909 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.18□□□□□ -0.3
PCOLCE-209ENST00000490909 FAM50AQ14320 339 aaKnown RBP13.15□□□□□ -0.3
PCOLCE-209ENST00000490909 SHPRHQ149N8 1683 aa13.15□□□□□ -0.31
PCOLCE-209ENST00000490909 LRP6O75581 1613 aa13.14□□□□□ -0.31
PCOLCE-209ENST00000490909 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
PCOLCE-209ENST00000490909 SLC52A1Q9NWF4 448 aa13.14□□□□□ -0.31
PCOLCE-209ENST00000490909 MSH6P52701 1360 aa13.13□□□□□ -0.31
PCOLCE-209ENST00000490909 ROCK1Q13464 1354 aa13.13□□□□□ -0.31
PCOLCE-209ENST00000490909 TRPM2O94759 1503 aa13.13□□□□□ -0.31
PCOLCE-209ENST00000490909 SETBP1Q9Y6X0 1596 aa13.12□□□□□ -0.31
PCOLCE-209ENST00000490909 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
PCOLCE-209ENST00000490909 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
PCOLCE-209ENST00000490909 PTPRUQ92729 1446 aa13.11□□□□□ -0.31
PCOLCE-209ENST00000490909 NALCNQ8IZF0 1738 aa13.1□□□□□ -0.31
PCOLCE-209ENST00000490909 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
PCOLCE-209ENST00000490909 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
PCOLCE-209ENST00000490909 NEXMIFQ5QGS0 1516 aa13.08□□□□□ -0.31
PCOLCE-209ENST00000490909 NCOA3Q9Y6Q9 1424 aa13.07□□□□□ -0.32
PCOLCE-209ENST00000490909 PPP1R15AO75807 674 aaPredicted RBP13.07□□□□□ -0.32
PCOLCE-209ENST00000490909 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
PCOLCE-209ENST00000490909 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
PCOLCE-209ENST00000490909 JCADQ9P266 1359 aa13.07□□□□□ -0.32
PCOLCE-209ENST00000490909 ASXL1Q8IXJ9 1541 aa13.06□□□□□ -0.32
PCOLCE-209ENST00000490909 SLAIN2Q9P270 581 aa13.05□□□□□ -0.32
PCOLCE-209ENST00000490909 TBX22Q9Y458 520 aa13.05□□□□□ -0.32
PCOLCE-209ENST00000490909 BCANQ96GW7 911 aa13.04□□□□□ -0.32
PCOLCE-209ENST00000490909 NUP155O75694 1391 aa13.04□□□□□ -0.32
PCOLCE-209ENST00000490909 KIF1BO60333 1816 aa13.04□□□□□ -0.32
PCOLCE-209ENST00000490909 DCCP43146 1447 aa13.04□□□□□ -0.32
PCOLCE-209ENST00000490909 MST1RQ04912 1400 aa13.03□□□□□ -0.32
PCOLCE-209ENST00000490909 CHGAP10645 457 aaKnown RBP13.02□□□□□ -0.33
PCOLCE-209ENST00000490909 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.01□□□□□ -0.33
PCOLCE-209ENST00000490909 LAMC1P11047 1609 aa13.01□□□□□ -0.33
PCOLCE-209ENST00000490909 PPLO60437 1756 aa13□□□□□ -0.33
PCOLCE-209ENST00000490909 METP08581 1390 aa13□□□□□ -0.33
PCOLCE-209ENST00000490909 ADGRL3Q9HAR2 1447 aa12.99□□□□□ -0.33
PCOLCE-209ENST00000490909 RRBP1Q9P2E9 1410 aaKnown RBP12.99□□□□□ -0.33
PCOLCE-209ENST00000490909 NAIPQ13075 1403 aa12.98□□□□□ -0.33
PCOLCE-209ENST00000490909 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
PCOLCE-209ENST00000490909 SPATA31A6Q5VVP1 1343 aa12.97□□□□□ -0.33
PCOLCE-209ENST00000490909 ITGAEP38570 1179 aa12.97□□□□□ -0.33
PCOLCE-209ENST00000490909 SETD5Q9C0A6 1442 aa12.96□□□□□ -0.33
PCOLCE-209ENST00000490909 HDGFP51858 240 aaKnown RBP12.96□□□□□ -0.33
PCOLCE-209ENST00000490909 C14orf37Q86TY3 774 aa12.96□□□□□ -0.33
PCOLCE-209ENST00000490909 CADPS2Q86UW7 1296 aa12.96□□□□□ -0.33
PCOLCE-209ENST00000490909 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.33
PCOLCE-209ENST00000490909 C19orf44Q9H6X5 657 aa12.96□□□□□ -0.33
PCOLCE-209ENST00000490909 AMOTL2Q9Y2J4 779 aa12.96□□□□□ -0.33
PCOLCE-209ENST00000490909 IFT172Q9UG01 1749 aa12.96□□□□□ -0.34
PCOLCE-209ENST00000490909 PTCH1Q13635 1447 aa12.96□□□□□ -0.34
PCOLCE-209ENST00000490909 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.34
PCOLCE-209ENST00000490909 ATF3P18847 181 aa12.93□□□□□ -0.34
PCOLCE-209ENST00000490909 COL22A1Q8NFW1 1626 aaPredicted RBP12.92□□□□□ -0.34
PCOLCE-209ENST00000490909 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
PCOLCE-209ENST00000490909 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
PCOLCE-209ENST00000490909 EP400Q96L91 3159 aa12.91□□□□□ -0.34
PCOLCE-209ENST00000490909 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
PCOLCE-209ENST00000490909 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
PCOLCE-209ENST00000490909 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
PCOLCE-209ENST00000490909 RGS12O14924 1447 aa12.91□□□□□ -0.34
PCOLCE-209ENST00000490909 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.34
PCOLCE-209ENST00000490909 ROBO2Q9HCK4 1378 aa12.9□□□□□ -0.34
PCOLCE-209ENST00000490909 KNDC1Q76NI1 1749 aa12.9□□□□□ -0.34
PCOLCE-209ENST00000490909 SRCAPQ6ZRS2 3230 aa12.89□□□□□ -0.35
PCOLCE-209ENST00000490909 MARF1Q9Y4F3 1742 aaKnown RBP12.89□□□□□ -0.35
PCOLCE-209ENST00000490909 ZNF326Q5BKZ1 582 aaKnown RBP12.89□□□□□ -0.35
PCOLCE-209ENST00000490909 MEX3CQ5U5Q3 659 aaKnown RBP12.89□□□□□ -0.35
PCOLCE-209ENST00000490909 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
PCOLCE-209ENST00000490909 AFF2P51816 1311 aa12.87□□□□□ -0.35
PCOLCE-209ENST00000490909 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
PCOLCE-209ENST00000490909 NUTM2BA6NNL0 878 aaPredicted RBP12.85□□□□□ -0.35
PCOLCE-209ENST00000490909 NUTM2EB1AL46 878 aaPredicted RBP12.85□□□□□ -0.35
PCOLCE-209ENST00000490909 NUTM2AQ8IVF1 878 aaPredicted RBP12.85□□□□□ -0.35
PCOLCE-209ENST00000490909 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCOLCE-209ENST00000490909 MYOM2P54296 1465 aa12.85□□□□□ -0.35
PCOLCE-209ENST00000490909 PXDNQ92626 1479 aa12.85□□□□□ -0.35
PCOLCE-209ENST00000490909 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
PCOLCE-209ENST00000490909 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.82□□□□□ -0.36
PCOLCE-209ENST00000490909 TECPR2O15040 1411 aa12.82□□□□□ -0.36
PCOLCE-209ENST00000490909 SPATA31E1Q6ZUB1 1445 aa12.82□□□□□ -0.36
PCOLCE-209ENST00000490909 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
PCOLCE-209ENST00000490909 C8orf37Q96NL8 207 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms