RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.82■■□□□ 1.24
COL27A1-206ENST00000490831 CHGAP10645 457 aaKnown RBP22.81■■□□□ 1.24
COL27A1-206ENST00000490831 SLC4A1APQ9BWU0 796 aaKnown RBP22.8■■□□□ 1.24
COL27A1-206ENST00000490831 CLTCL1P53675 1640 aa22.79■■□□□ 1.24
COL27A1-206ENST00000490831 UBAP1LF5GYI3 381 aa22.79■■□□□ 1.24
COL27A1-206ENST00000490831 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
COL27A1-206ENST00000490831 SLC26A8Q96RN1 970 aa22.78■■□□□ 1.24
COL27A1-206ENST00000490831 SETD5Q9C0A6 1442 aa22.76■■□□□ 1.23
COL27A1-206ENST00000490831 PPP1R15AO75807 674 aaPredicted RBP22.76■■□□□ 1.23
COL27A1-206ENST00000490831 KCNA6P17658 529 aa22.76■■□□□ 1.23
COL27A1-206ENST00000490831 NWD1Q149M9 1564 aa22.75■■□□□ 1.23
COL27A1-206ENST00000490831 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
COL27A1-206ENST00000490831 ADAMTS13Q76LX8 1427 aa22.74■■□□□ 1.23
COL27A1-206ENST00000490831 DIP2AQ14689 1571 aa22.72■■□□□ 1.23
COL27A1-206ENST00000490831 ALKQ9UM73 1620 aa22.72■■□□□ 1.23
COL27A1-206ENST00000490831 TOM1O60784 492 aa22.72■■□□□ 1.23
COL27A1-206ENST00000490831 NKTRP30414 1462 aaKnown RBP22.72■■□□□ 1.23
COL27A1-206ENST00000490831 BCANQ96GW7 911 aa22.71■■□□□ 1.23
COL27A1-206ENST00000490831 MPHOSPH9Q99550 1183 aa22.71■■□□□ 1.23
COL27A1-206ENST00000490831 KIF1BO60333 1816 aa22.71■■□□□ 1.23
COL27A1-206ENST00000490831 NUTM2DQ5VT03 806 aaPredicted RBP22.7■■□□□ 1.22
COL27A1-206ENST00000490831 XIRP1Q702N8 1843 aaKnown RBP22.7■■□□□ 1.22
COL27A1-206ENST00000490831 CHD2O14647 1828 aaKnown RBP22.69■■□□□ 1.22
COL27A1-206ENST00000490831 NEXMIFQ5QGS0 1516 aa22.69■■□□□ 1.22
COL27A1-206ENST00000490831 PIK3R4Q99570 1358 aa22.68■■□□□ 1.22
COL27A1-206ENST00000490831 SETBP1Q9Y6X0 1596 aa22.67■■□□□ 1.22
COL27A1-206ENST00000490831 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
COL27A1-206ENST00000490831 ZNF326Q5BKZ1 582 aaKnown RBP22.67■■□□□ 1.22
COL27A1-206ENST00000490831 TMEM94Q12767 1356 aa22.66■■□□□ 1.22
COL27A1-206ENST00000490831 FOXD1Q16676 465 aa22.66■■□□□ 1.22
COL27A1-206ENST00000490831 NRXN3Q9Y4C0 1643 aa22.66■■□□□ 1.22
COL27A1-206ENST00000490831 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
COL27A1-206ENST00000490831 PROSER2Q86WR7 435 aaPredicted RBP22.63■■□□□ 1.21
COL27A1-206ENST00000490831 RPGRIP1LQ68CZ1 1315 aa22.62■■□□□ 1.21
COL27A1-206ENST00000490831 HRCP23327 699 aa22.62■■□□□ 1.21
COL27A1-206ENST00000490831 CCDC144AA2RUR9 1427 aa22.61■■□□□ 1.21
COL27A1-206ENST00000490831 PIP4K2BP78356 416 aa22.6■■□□□ 1.21
COL27A1-206ENST00000490831 NCOA3Q9Y6Q9 1424 aa22.59■■□□□ 1.21
COL27A1-206ENST00000490831 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
COL27A1-206ENST00000490831 PTPRUQ92729 1446 aa22.58■■□□□ 1.21
COL27A1-206ENST00000490831 VGFO15240 615 aaPredicted RBP22.58■■□□□ 1.21
COL27A1-206ENST00000490831 PPLO60437 1756 aa22.56■■□□□ 1.2
COL27A1-206ENST00000490831 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
COL27A1-206ENST00000490831 XRN1Q8IZH2 1706 aaKnown RBP22.54■■□□□ 1.2
COL27A1-206ENST00000490831 METP08581 1390 aa22.54■■□□□ 1.2
COL27A1-206ENST00000490831 HSPA1LP34931 641 aa22.54■■□□□ 1.2
COL27A1-206ENST00000490831 RBM33Q96EV2 1170 aaKnown RBP22.54■■□□□ 1.2
COL27A1-206ENST00000490831 AMOTL2Q9Y2J4 779 aa22.54■■□□□ 1.2
COL27A1-206ENST00000490831 MSH6P52701 1360 aa22.52■■□□□ 1.2
COL27A1-206ENST00000490831 FAM135BQ49AJ0 1406 aa22.51■■□□□ 1.19
COL27A1-206ENST00000490831 SETD1AO15047 1707 aaKnown RBP22.51■■□□□ 1.19
COL27A1-206ENST00000490831 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
COL27A1-206ENST00000490831 IFT172Q9UG01 1749 aa22.48■■□□□ 1.19
COL27A1-206ENST00000490831 PRAG1Q86YV5 1406 aa22.47■■□□□ 1.19
COL27A1-206ENST00000490831 RGL3Q3MIN7 710 aa22.46■■□□□ 1.19
COL27A1-206ENST00000490831 C19orf44Q9H6X5 657 aa22.45■■□□□ 1.18
COL27A1-206ENST00000490831 ADGRF5Q8IZF2 1346 aa22.44■■□□□ 1.18
COL27A1-206ENST00000490831 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
COL27A1-206ENST00000490831 SLAIN2Q9P270 581 aa22.43■■□□□ 1.18
COL27A1-206ENST00000490831 DCCP43146 1447 aa22.42■■□□□ 1.18
COL27A1-206ENST00000490831 PTCH1Q13635 1447 aa22.42■■□□□ 1.18
COL27A1-206ENST00000490831 ROBO1Q9Y6N7 1651 aa22.42■■□□□ 1.18
COL27A1-206ENST00000490831 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
COL27A1-206ENST00000490831 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
COL27A1-206ENST00000490831 CADPS2Q86UW7 1296 aa22.4■■□□□ 1.18
COL27A1-206ENST00000490831 NRXN1Q9ULB1 1477 aa22.4■■□□□ 1.18
COL27A1-206ENST00000490831 MYOM2P54296 1465 aa22.39■■□□□ 1.17
COL27A1-206ENST00000490831 ATF3P18847 181 aa22.37■■□□□ 1.17
COL27A1-206ENST00000490831 ADGRL3Q9HAR2 1447 aa22.37■■□□□ 1.17
COL27A1-206ENST00000490831 ROBO2Q9HCK4 1378 aa22.37■■□□□ 1.17
COL27A1-206ENST00000490831 DISP3Q9P2K9 1392 aa22.36■■□□□ 1.17
COL27A1-206ENST00000490831 TECPR2O15040 1411 aa22.33■■□□□ 1.17
COL27A1-206ENST00000490831 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.17
COL27A1-206ENST00000490831 NALCNQ8IZF0 1738 aa22.32■■□□□ 1.16
COL27A1-206ENST00000490831 MED1Q15648 1581 aaPredicted RBP22.31■■□□□ 1.16
COL27A1-206ENST00000490831 LRPPRCP42704 1394 aaKnown RBP22.31■■□□□ 1.16
COL27A1-206ENST00000490831 C14orf93Q9H972 538 aaKnown RBP22.31■■□□□ 1.16
COL27A1-206ENST00000490831 MST1RQ04912 1400 aa22.31■■□□□ 1.16
COL27A1-206ENST00000490831 ABCC11Q96J66 1382 aa22.3■■□□□ 1.16
COL27A1-206ENST00000490831 LAMC1P11047 1609 aa22.29■■□□□ 1.16
COL27A1-206ENST00000490831 STAC3Q96MF2 364 aa22.29■■□□□ 1.16
COL27A1-206ENST00000490831 KNDC1Q76NI1 1749 aa22.28■■□□□ 1.16
COL27A1-206ENST00000490831 AHDC1Q5TGY3 1603 aaPredicted RBP22.28■■□□□ 1.16
COL27A1-206ENST00000490831 PHLPP1O60346 1717 aa22.26■■□□□ 1.15
COL27A1-206ENST00000490831 YTHDC2Q9H6S0 1430 aaKnown RBP22.26■■□□□ 1.15
COL27A1-206ENST00000490831 TMEM132EQ6IEE7 984 aa22.26■■□□□ 1.15
COL27A1-206ENST00000490831 BRINP3Q76B58 766 aa22.26■■□□□ 1.15
COL27A1-206ENST00000490831 DHX57Q6P158 1386 aaKnown RBP22.25■■□□□ 1.15
COL27A1-206ENST00000490831 COL16A1Q07092 1604 aaPredicted RBP22.25■■□□□ 1.15
COL27A1-206ENST00000490831 CFAP70Q5T0N1 1121 aa22.24■■□□□ 1.15
COL27A1-206ENST00000490831 SIRT1Q96EB6 747 aa22.24■■□□□ 1.15
COL27A1-206ENST00000490831 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
COL27A1-206ENST00000490831 STK26Q9P289 416 aa22.22■■□□□ 1.15
COL27A1-206ENST00000490831 C1orf167Q5SNV9 1468 aa22.22■■□□□ 1.15
COL27A1-206ENST00000490831 CDC42BPGQ6DT37 1551 aa22.21■■□□□ 1.15
COL27A1-206ENST00000490831 ADGRB1O14514 1584 aa22.21■■□□□ 1.15
COL27A1-206ENST00000490831 JCADQ9P266 1359 aa22.2■■□□□ 1.14
COL27A1-206ENST00000490831 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
COL27A1-206ENST00000490831 NHSL1Q5SYE7 1610 aa22.18■■□□□ 1.14
COL27A1-206ENST00000490831 PLEKHH1Q9ULM0 1364 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms