RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 SLC4A1APQ9BWU0 796 aaKnown RBP25.27■■□□□ 1.64
RAPGEF3-212ENST00000490387 TOM1O60784 492 aa25.26■■□□□ 1.63
RAPGEF3-212ENST00000490387 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
RAPGEF3-212ENST00000490387 LRRC7Q96NW7 1537 aa25.25■■□□□ 1.63
RAPGEF3-212ENST00000490387 PIP4K2BP78356 416 aa25.23■■□□□ 1.63
RAPGEF3-212ENST00000490387 SPHKAPQ2M3C7 1700 aa25.23■■□□□ 1.63
RAPGEF3-212ENST00000490387 TMEM131LA2VDJ0 1609 aa25.23■■□□□ 1.63
RAPGEF3-212ENST00000490387 CHGAP10645 457 aaKnown RBP25.19■■□□□ 1.62
RAPGEF3-212ENST00000490387 BCANQ96GW7 911 aa25.18■■□□□ 1.62
RAPGEF3-212ENST00000490387 RIMS2Q9UQ26 1411 aa25.18■■□□□ 1.62
RAPGEF3-212ENST00000490387 TRPM2O94759 1503 aa25.17■■□□□ 1.62
RAPGEF3-212ENST00000490387 ZFYVE9O95405 1425 aa25.17■■□□□ 1.62
RAPGEF3-212ENST00000490387 PPP1R15AO75807 674 aaPredicted RBP25.16■■□□□ 1.62
RAPGEF3-212ENST00000490387 SLC26A8Q96RN1 970 aa25.16■■□□□ 1.62
RAPGEF3-212ENST00000490387 DHX57Q6P158 1386 aaKnown RBP25.16■■□□□ 1.62
RAPGEF3-212ENST00000490387 DISP3Q9P2K9 1392 aa25.16■■□□□ 1.62
RAPGEF3-212ENST00000490387 ALKQ9UM73 1620 aa25.15■■□□□ 1.62
RAPGEF3-212ENST00000490387 XIRP1Q702N8 1843 aaKnown RBP25.15■■□□□ 1.62
RAPGEF3-212ENST00000490387 HDGFP51858 240 aaKnown RBP25.15■■□□□ 1.62
RAPGEF3-212ENST00000490387 FOXD1Q16676 465 aa25.14■■□□□ 1.62
RAPGEF3-212ENST00000490387 SENP3Q9H4L4 574 aaPredicted RBP25.12■■□□□ 1.61
RAPGEF3-212ENST00000490387 PLEKHG1Q9ULL1 1385 aa25.12■■□□□ 1.61
RAPGEF3-212ENST00000490387 KCNA6P17658 529 aa25.11■■□□□ 1.61
RAPGEF3-212ENST00000490387 HSPA1LP34931 641 aa25.1■■□□□ 1.61
RAPGEF3-212ENST00000490387 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.1■■□□□ 1.61
RAPGEF3-212ENST00000490387 CLTCL1P53675 1640 aa25.1■■□□□ 1.61
RAPGEF3-212ENST00000490387 ANKRD30BQ9BXX2 1392 aa25.09■■□□□ 1.61
RAPGEF3-212ENST00000490387 NWD1Q149M9 1564 aa25.09■■□□□ 1.61
RAPGEF3-212ENST00000490387 NUTM2DQ5VT03 806 aaPredicted RBP25.06■■□□□ 1.6
RAPGEF3-212ENST00000490387 NKTRP30414 1462 aaKnown RBP25.06■■□□□ 1.6
RAPGEF3-212ENST00000490387 TMEM94Q12767 1356 aa25.05■■□□□ 1.6
RAPGEF3-212ENST00000490387 CHD2O14647 1828 aaKnown RBP25.05■■□□□ 1.6
RAPGEF3-212ENST00000490387 PROSER2Q86WR7 435 aaPredicted RBP25.04■■□□□ 1.6
RAPGEF3-212ENST00000490387 DIP2AQ14689 1571 aa25.01■■□□□ 1.59
RAPGEF3-212ENST00000490387 CCDC144AA2RUR9 1427 aa25.01■■□□□ 1.59
RAPGEF3-212ENST00000490387 KIF1BO60333 1816 aa24.99■■□□□ 1.59
RAPGEF3-212ENST00000490387 ADAMTS13Q76LX8 1427 aa24.99■■□□□ 1.59
RAPGEF3-212ENST00000490387 RBM33Q96EV2 1170 aaKnown RBP24.99■■□□□ 1.59
RAPGEF3-212ENST00000490387 TBX22Q9Y458 520 aa24.99■■□□□ 1.59
RAPGEF3-212ENST00000490387 ZNF326Q5BKZ1 582 aaKnown RBP24.98■■□□□ 1.59
RAPGEF3-212ENST00000490387 MSH6P52701 1360 aa24.94■■□□□ 1.58
RAPGEF3-212ENST00000490387 SPATA31E1Q6ZUB1 1445 aa24.94■■□□□ 1.58
RAPGEF3-212ENST00000490387 MED1Q15648 1581 aaPredicted RBP24.93■■□□□ 1.58
RAPGEF3-212ENST00000490387 PIK3R4Q99570 1358 aa24.93■■□□□ 1.58
RAPGEF3-212ENST00000490387 ILDR2Q71H61 639 aa24.92■■□□□ 1.58
RAPGEF3-212ENST00000490387 NRXN3Q9Y4C0 1643 aa24.9■■□□□ 1.58
RAPGEF3-212ENST00000490387 SETBP1Q9Y6X0 1596 aa24.9■■□□□ 1.58
RAPGEF3-212ENST00000490387 NEXMIFQ5QGS0 1516 aa24.9■■□□□ 1.58
RAPGEF3-212ENST00000490387 FAM135BQ49AJ0 1406 aa24.89■■□□□ 1.58
RAPGEF3-212ENST00000490387 ROBO1Q9Y6N7 1651 aa24.88■■□□□ 1.57
RAPGEF3-212ENST00000490387 CLSPNQ9HAW4 1339 aa24.87■■□□□ 1.57
RAPGEF3-212ENST00000490387 C14orf37Q86TY3 774 aa24.86■■□□□ 1.57
RAPGEF3-212ENST00000490387 NCOA3Q9Y6Q9 1424 aa24.86■■□□□ 1.57
RAPGEF3-212ENST00000490387 IFT172Q9UG01 1749 aa24.84■■□□□ 1.57
RAPGEF3-212ENST00000490387 AMOTL2Q9Y2J4 779 aa24.84■■□□□ 1.57
RAPGEF3-212ENST00000490387 PTPRUQ92729 1446 aa24.84■■□□□ 1.57
RAPGEF3-212ENST00000490387 SIN3AQ96ST3 1273 aa24.83■■□□□ 1.57
RAPGEF3-212ENST00000490387 PPLO60437 1756 aa24.82■■□□□ 1.56
RAPGEF3-212ENST00000490387 XRN1Q8IZH2 1706 aaKnown RBP24.82■■□□□ 1.56
RAPGEF3-212ENST00000490387 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.81■■□□□ 1.56
RAPGEF3-212ENST00000490387 CCER1Q8TC90 406 aaPredicted RBP24.8■■□□□ 1.56
RAPGEF3-212ENST00000490387 SLAIN2Q9P270 581 aa24.8■■□□□ 1.56
RAPGEF3-212ENST00000490387 RPGRIP1LQ68CZ1 1315 aa24.78■■□□□ 1.56
RAPGEF3-212ENST00000490387 METP08581 1390 aa24.78■■□□□ 1.56
RAPGEF3-212ENST00000490387 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
RAPGEF3-212ENST00000490387 VGFO15240 615 aaPredicted RBP24.76■■□□□ 1.55
RAPGEF3-212ENST00000490387 CADPS2Q86UW7 1296 aa24.76■■□□□ 1.55
RAPGEF3-212ENST00000490387 C19orf44Q9H6X5 657 aa24.76■■□□□ 1.55
RAPGEF3-212ENST00000490387 PHLPP1O60346 1717 aa24.75■■□□□ 1.55
RAPGEF3-212ENST00000490387 ATF3P18847 181 aa24.75■■□□□ 1.55
RAPGEF3-212ENST00000490387 RGL3Q3MIN7 710 aa24.75■■□□□ 1.55
RAPGEF3-212ENST00000490387 SOCS7O14512 581 aa24.73■■□□□ 1.55
RAPGEF3-212ENST00000490387 NEUROD1Q13562 356 aa24.73■■□□□ 1.55
RAPGEF3-212ENST00000490387 MYOM2P54296 1465 aa24.72■■□□□ 1.55
RAPGEF3-212ENST00000490387 SETD1AO15047 1707 aaKnown RBP24.72■■□□□ 1.55
RAPGEF3-212ENST00000490387 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.54
RAPGEF3-212ENST00000490387 DCCP43146 1447 aa24.69■■□□□ 1.54
RAPGEF3-212ENST00000490387 L3MBTL2Q969R5 705 aa24.66■■□□□ 1.54
RAPGEF3-212ENST00000490387 NALCNQ8IZF0 1738 aa24.65■■□□□ 1.54
RAPGEF3-212ENST00000490387 COL16A1Q07092 1604 aaPredicted RBP24.64■■□□□ 1.54
RAPGEF3-212ENST00000490387 ADGRF5Q8IZF2 1346 aa24.64■■□□□ 1.54
RAPGEF3-212ENST00000490387 PIK3C2GO75747 1445 aa24.64■■□□□ 1.54
RAPGEF3-212ENST00000490387 ADGRL3Q9HAR2 1447 aa24.64■■□□□ 1.54
RAPGEF3-212ENST00000490387 STAC3Q96MF2 364 aa24.64■■□□□ 1.54
RAPGEF3-212ENST00000490387 PTCH1Q13635 1447 aa24.63■■□□□ 1.53
RAPGEF3-212ENST00000490387 DCAF11Q8TEB1 546 aa24.63■■□□□ 1.53
RAPGEF3-212ENST00000490387 AHDC1Q5TGY3 1603 aaPredicted RBP24.63■■□□□ 1.53
RAPGEF3-212ENST00000490387 TONSLQ96HA7 1378 aa24.63■■□□□ 1.53
RAPGEF3-212ENST00000490387 JCADQ9P266 1359 aa24.62■■□□□ 1.53
RAPGEF3-212ENST00000490387 MST1RQ04912 1400 aa24.6■■□□□ 1.53
RAPGEF3-212ENST00000490387 BRINP3Q76B58 766 aa24.59■■□□□ 1.53
RAPGEF3-212ENST00000490387 TIMELESSQ9UNS1 1208 aa24.59■■□□□ 1.53
RAPGEF3-212ENST00000490387 ROBO2Q9HCK4 1378 aa24.58■■□□□ 1.53
RAPGEF3-212ENST00000490387 ASXL1Q8IXJ9 1541 aa24.58■■□□□ 1.53
RAPGEF3-212ENST00000490387 PRAG1Q86YV5 1406 aa24.58■■□□□ 1.53
RAPGEF3-212ENST00000490387 KDM2AQ9Y2K7 1162 aa24.57■■□□□ 1.52
RAPGEF3-212ENST00000490387 LAMC1P11047 1609 aa24.56■■□□□ 1.52
RAPGEF3-212ENST00000490387 SHPRHQ149N8 1683 aa24.53■■□□□ 1.52
RAPGEF3-212ENST00000490387 KIAA1210Q9ULL0 1709 aa24.53■■□□□ 1.52
RAPGEF3-212ENST00000490387 RGS17Q9UGC6 210 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms