RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
ECM1-205ENST00000490346 NUTM2DQ5VT03 806 aaPredicted RBP13.54□□□□□ -0.24
ECM1-205ENST00000490346 PPP1R15AO75807 674 aaPredicted RBP13.53□□□□□ -0.24
ECM1-205ENST00000490346 ZNF326Q5BKZ1 582 aaKnown RBP13.53□□□□□ -0.24
ECM1-205ENST00000490346 SENP3Q9H4L4 574 aaPredicted RBP13.53□□□□□ -0.24
ECM1-205ENST00000490346 ZNF335Q9H4Z2 1342 aaPredicted RBP13.53□□□□□ -0.24
ECM1-205ENST00000490346 HDGFP51858 240 aaKnown RBP13.51□□□□□ -0.25
ECM1-205ENST00000490346 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.51□□□□□ -0.25
ECM1-205ENST00000490346 BCANQ96GW7 911 aa13.5□□□□□ -0.25
ECM1-205ENST00000490346 LTBP4Q8N2S1 1624 aa13.5□□□□□ -0.25
ECM1-205ENST00000490346 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
ECM1-205ENST00000490346 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
ECM1-205ENST00000490346 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
ECM1-205ENST00000490346 SPATA31E1Q6ZUB1 1445 aa13.48□□□□□ -0.25
ECM1-205ENST00000490346 SLC26A8Q96RN1 970 aa13.48□□□□□ -0.25
ECM1-205ENST00000490346 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
ECM1-205ENST00000490346 CERKQ8TCT0 537 aa13.46□□□□□ -0.25
ECM1-205ENST00000490346 STRCP1A6NGW2 1772 aa13.45□□□□□ -0.26
ECM1-205ENST00000490346 PPLO60437 1756 aa13.45□□□□□ -0.26
ECM1-205ENST00000490346 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
ECM1-205ENST00000490346 ADAMTS13Q76LX8 1427 aa13.45□□□□□ -0.26
ECM1-205ENST00000490346 PCGF6Q9BYE7 350 aa13.44□□□□□ -0.26
ECM1-205ENST00000490346 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
ECM1-205ENST00000490346 CPS1P31327 1500 aa13.44□□□□□ -0.26
ECM1-205ENST00000490346 NRXN3Q9Y4C0 1643 aa13.43□□□□□ -0.26
ECM1-205ENST00000490346 VGFO15240 615 aaPredicted RBP13.43□□□□□ -0.26
ECM1-205ENST00000490346 DIP2AQ14689 1571 aa13.43□□□□□ -0.26
ECM1-205ENST00000490346 IFT172Q9UG01 1749 aa13.43□□□□□ -0.26
ECM1-205ENST00000490346 TBX22Q9Y458 520 aa13.42□□□□□ -0.26
ECM1-205ENST00000490346 DHX57Q6P158 1386 aaKnown RBP13.42□□□□□ -0.26
ECM1-205ENST00000490346 NWD1Q149M9 1564 aa13.4□□□□□ -0.26
ECM1-205ENST00000490346 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
ECM1-205ENST00000490346 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
ECM1-205ENST00000490346 KCNA6P17658 529 aa13.39□□□□□ -0.27
ECM1-205ENST00000490346 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
ECM1-205ENST00000490346 IQSEC2Q5JU85 1478 aa13.38□□□□□ -0.27
ECM1-205ENST00000490346 METP08581 1390 aa13.37□□□□□ -0.27
ECM1-205ENST00000490346 PIK3R4Q99570 1358 aa13.37□□□□□ -0.27
ECM1-205ENST00000490346 ALKQ9UM73 1620 aa13.37□□□□□ -0.27
ECM1-205ENST00000490346 PTPRUQ92729 1446 aa13.37□□□□□ -0.27
ECM1-205ENST00000490346 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
ECM1-205ENST00000490346 MYOM2P54296 1465 aa13.36□□□□□ -0.27
ECM1-205ENST00000490346 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
ECM1-205ENST00000490346 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
ECM1-205ENST00000490346 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
ECM1-205ENST00000490346 DCAF11Q8TEB1 546 aa13.35□□□□□ -0.27
ECM1-205ENST00000490346 FBXO41Q8TF61 875 aa13.35□□□□□ -0.27
ECM1-205ENST00000490346 RBM33Q96EV2 1170 aaKnown RBP13.35□□□□□ -0.27
ECM1-205ENST00000490346 KDM2AQ9Y2K7 1162 aa13.35□□□□□ -0.27
ECM1-205ENST00000490346 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
ECM1-205ENST00000490346 XIRP1Q702N8 1843 aaKnown RBP13.34□□□□□ -0.27
ECM1-205ENST00000490346 XRN1Q8IZH2 1706 aaKnown RBP13.34□□□□□ -0.27
ECM1-205ENST00000490346 AMOTL2Q9Y2J4 779 aa13.34□□□□□ -0.27
ECM1-205ENST00000490346 NRXN1Q9ULB1 1477 aa13.34□□□□□ -0.27
ECM1-205ENST00000490346 TMEM94Q12767 1356 aa13.33□□□□□ -0.27
ECM1-205ENST00000490346 NEUROD1Q13562 356 aa13.33□□□□□ -0.28
ECM1-205ENST00000490346 ILDR1Q86SU0 546 aaPredicted RBP13.32□□□□□ -0.28
ECM1-205ENST00000490346 UBAP1LF5GYI3 381 aa13.31□□□□□ -0.28
ECM1-205ENST00000490346 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
ECM1-205ENST00000490346 CFAP70Q5T0N1 1121 aa13.3□□□□□ -0.28
ECM1-205ENST00000490346 C14orf93Q9H972 538 aaKnown RBP13.3□□□□□ -0.28
ECM1-205ENST00000490346 LAMC1P11047 1609 aa13.3□□□□□ -0.28
ECM1-205ENST00000490346 TMEM132EQ6IEE7 984 aa13.29□□□□□ -0.28
ECM1-205ENST00000490346 STAC3Q96MF2 364 aa13.29□□□□□ -0.28
ECM1-205ENST00000490346 L3MBTL2Q969R5 705 aa13.28□□□□□ -0.28
ECM1-205ENST00000490346 TOM1O60784 492 aa13.27□□□□□ -0.29
ECM1-205ENST00000490346 C14orf37Q86TY3 774 aa13.27□□□□□ -0.29
ECM1-205ENST00000490346 STK26Q9P289 416 aa13.27□□□□□ -0.29
ECM1-205ENST00000490346 MSH6P52701 1360 aa13.27□□□□□ -0.29
ECM1-205ENST00000490346 ROBO2Q9HCK4 1378 aa13.27□□□□□ -0.29
ECM1-205ENST00000490346 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
ECM1-205ENST00000490346 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
ECM1-205ENST00000490346 NCOA3Q9Y6Q9 1424 aa13.26□□□□□ -0.29
ECM1-205ENST00000490346 PRAG1Q86YV5 1406 aa13.25□□□□□ -0.29
ECM1-205ENST00000490346 YTHDC2Q9H6S0 1430 aaKnown RBP13.25□□□□□ -0.29
ECM1-205ENST00000490346 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
ECM1-205ENST00000490346 PIP4K2BP78356 416 aa13.25□□□□□ -0.29
ECM1-205ENST00000490346 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
ECM1-205ENST00000490346 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
ECM1-205ENST00000490346 ADGRB1O14514 1584 aa13.24□□□□□ -0.29
ECM1-205ENST00000490346 TECPR2O15040 1411 aa13.23□□□□□ -0.29
ECM1-205ENST00000490346 TONSLQ96HA7 1378 aa13.23□□□□□ -0.29
ECM1-205ENST00000490346 ABCC11Q96J66 1382 aa13.23□□□□□ -0.29
ECM1-205ENST00000490346 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
ECM1-205ENST00000490346 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
ECM1-205ENST00000490346 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
ECM1-205ENST00000490346 ATF3P18847 181 aa13.21□□□□□ -0.29
ECM1-205ENST00000490346 WAPLQ7Z5K2 1190 aa13.21□□□□□ -0.29
ECM1-205ENST00000490346 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
ECM1-205ENST00000490346 KIAA1210Q9ULL0 1709 aa13.21□□□□□ -0.3
ECM1-205ENST00000490346 PLEKHH1Q9ULM0 1364 aa13.2□□□□□ -0.3
ECM1-205ENST00000490346 CLSPNQ9HAW4 1339 aa13.19□□□□□ -0.3
ECM1-205ENST00000490346 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
ECM1-205ENST00000490346 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
ECM1-205ENST00000490346 TRAK1Q9UPV9 953 aa13.19□□□□□ -0.3
ECM1-205ENST00000490346 DCCP43146 1447 aa13.19□□□□□ -0.3
ECM1-205ENST00000490346 FAM135BQ49AJ0 1406 aa13.19□□□□□ -0.3
ECM1-205ENST00000490346 PRAM1Q96QH2 718 aa13.18□□□□□ -0.3
ECM1-205ENST00000490346 SLAIN2Q9P270 581 aa13.18□□□□□ -0.3
ECM1-205ENST00000490346 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms