RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 DISP3Q9P2K9 1392 aa4.57□□□□□ -1.68
RPS6KC1-204ENST00000490299 WASHC2AQ641Q2 1341 aa4.57□□□□□ -1.68
RPS6KC1-204ENST00000490299 ACBD3Q9H3P7 528 aa4.57□□□□□ -1.68
RPS6KC1-204ENST00000490299 CFAP74Q9C0B2 1584 aa4.57□□□□□ -1.68
RPS6KC1-204ENST00000490299 CALRP27797 417 aaKnown RBP4.57□□□□□ -1.68
RPS6KC1-204ENST00000490299 NUCB2P80303 420 aa4.57□□□□□ -1.68
RPS6KC1-204ENST00000490299 NUP155O75694 1391 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 ZNF771Q7L3S4 317 aaPredicted RBP4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 VSIG10Q8N0Z9 540 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 STAC3Q96MF2 364 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 STK31Q9BXU1 1019 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 ARGLU1Q9NWB6 273 aaPredicted RBP4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 SCAPERQ9BY12 1400 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 TPM1P09493 284 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 KANK4Q5T7N3 995 aaPredicted RBP4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 DIAPH3Q9NSV4 1193 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 TERF2IPQ9NYB0 399 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 DDX49Q9Y6V7 483 aaKnown RBP4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 REC8O95072 547 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 PRKRIP1Q9H875 184 aaPredicted RBP4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 CWC15Q9P013 229 aaKnown RBP4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 BRD4O60885 1362 aaPredicted RBP4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 ADCY10Q96PN6 1610 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 CCDC66A2RUB6 948 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 GOLGA6L19H0YKK7 550 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 SRPK2P78362 688 aaKnown RBP4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 SAMD9Q5K651 1589 aa4.56□□□□□ -1.68
RPS6KC1-204ENST00000490299 CCDC144AA2RUR9 1427 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 HSP90B1P14625 803 aaKnown RBP4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 PIP4K2BP78356 416 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 ZKSCAN2Q63HK3 967 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 DDX19BQ9UMR2 479 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 CCP110O43303 1012 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 WDR7Q9Y4E6 1490 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 USP47Q96K76 1375 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 U2AF1L5P0DN76 240 aaPredicted RBP4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 U2AF1Q01081 240 aaKnown RBP eCLIP4.55□□□□□ -1.686e-7■□□□□ 8.1
RPS6KC1-204ENST00000490299 CCDC173Q0VFZ6 552 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 TAF3Q5VWG9 929 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 ADRA2BP18089 450 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 KCNH8Q96L42 1107 aa4.55□□□□□ -1.68
RPS6KC1-204ENST00000490299 HOOK1Q9UJC3 728 aaKnown RBP4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 FANCD2Q9BXW9 1451 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 UGGT2Q9NYU1 1516 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 LRRFIP1Q32MZ4 808 aaKnown RBP4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 RUFY2Q8WXA3 655 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 KIF7Q2M1P5 1343 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 ARAP3Q8WWN8 1544 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 ADAMTS12P58397 1594 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 CDR1P51861 262 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 HMGN5P82970 282 aaKnown RBP4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 TSR1Q2NL82 804 aaKnown RBP4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 L3MBTL2Q969R5 705 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 CCDC7Q96M83 1385 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 PLEKHH2Q8IVE3 1493 aa4.54□□□□□ -1.68
RPS6KC1-204ENST00000490299 RRBP1Q9P2E9 1410 aaKnown RBP4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 TRIM6-TRIM34B2RNG4 842 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 CRBNQ96SW2 442 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 CAVIN1Q6NZI2 390 aaKnown RBP4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 ERCC4Q92889 916 aaPredicted RBP4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 AIDAQ96BJ3 306 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 AK7Q96M32 723 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 ANO8Q9HCE9 1232 aaPredicted RBP4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 SMG6Q86US8 1419 aaKnown RBP4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 INTS3Q68E01 1043 aaKnown RBP4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 EXOC6Q8TAG9 804 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 BECN2A8MW95 431 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 H3BQV1 296 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 MBD3O95983 291 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 IFFO2Q5TF58 517 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 EID1Q9Y6B2 187 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 MYOM3Q5VTT5 1437 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 GRIN2BQ13224 1484 aa4.53□□□□□ -1.68
RPS6KC1-204ENST00000490299 SUPT6HQ7KZ85 1726 aaKnown RBP4.53□□□□□ -1.69
RPS6KC1-204ENST00000490299 FHOD3Q2V2M9 1422 aa4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 FGD5Q6ZNL6 1462 aa4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 WASHC2CQ9Y4E1 1318 aa4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 RRP9O43818 475 aaKnown RBP4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 NFKBIBQ15653 356 aa4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 ANKRD20A12PQ8NF67 263 aa4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 API5Q9BZZ5 524 aaKnown RBP4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 FGD6Q6ZV73 1430 aa4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 MCM2P49736 904 aa4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 NAT10Q9H0A0 1025 aaKnown RBP4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 TOPBP1Q92547 1522 aa4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 SF3A1Q15459 793 aaKnown RBP4.52□□□□□ -1.69
RPS6KC1-204ENST00000490299 LRRC9Q6ZRR7 1453 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 CASKIN1Q8WXD9 1431 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 WWC1Q8IX03 1113 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 FAM184AQ8NB25 1140 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 EFCAB2Q5VUJ9 269 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 CCDC47Q96A33 483 aaKnown RBP4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 NEURL4Q96JN8 1562 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 NASPP49321 788 aaPredicted RBP4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 TPD52L1Q16890 204 aaPredicted RBP4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 RNF20Q5VTR2 975 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 PKNOX2Q96KN3 472 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 CDC45O75419 566 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 CNKSR2Q8WXI2 1034 aa4.51□□□□□ -1.69
RPS6KC1-204ENST00000490299 ADGBQ8N7X0 1667 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 528.5 ms