RNA–Protein interactions for RNA: ENST00000490123.5

ZNF542P-206, Transcript of zinc finger protein 542, pseudogene, humanhuman

TSL 1 (best)

Gene ZNF542P, Length 3,440 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542P-206ENST00000490123 TRAK2O60296 914 aa13.63□□□□□ -0.23
ZNF542P-206ENST00000490123 RRAGDQ9NQL2 400 aaPredicted RBP13.63□□□□□ -0.23
ZNF542P-206ENST00000490123 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
ZNF542P-206ENST00000490123 PLEKHH1Q9ULM0 1364 aa13.62□□□□□ -0.23
ZNF542P-206ENST00000490123 RALGAPBQ86X10 1494 aa13.62□□□□□ -0.23
ZNF542P-206ENST00000490123 GCC2Q8IWJ2 1684 aa13.62□□□□□ -0.23
ZNF542P-206ENST00000490123 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
ZNF542P-206ENST00000490123 ITPRIPQ8IWB1 547 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 PKNOX2Q96KN3 472 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 PANK2Q9BZ23 570 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 CHMP5Q9NZZ3 219 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 CFAP53Q96M91 514 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 ERBINQ96RT1 1412 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 GOLGA6L22H0YM25 854 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 C9orf84Q5VXU9 1444 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 ARID3AQ99856 593 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 TBC1D2Q9BYX2 928 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 C22orf23Q9BZE7 217 aa13.61□□□□□ -0.23
ZNF542P-206ENST00000490123 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
ZNF542P-206ENST00000490123 U2SURPO15042 1029 aaKnown RBP13.6□□□□□ -0.23
ZNF542P-206ENST00000490123 MCM4P33991 863 aa13.6□□□□□ -0.23
ZNF542P-206ENST00000490123 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
ZNF542P-206ENST00000490123 BCORL1Q5H9F3 1711 aa13.6□□□□□ -0.23
ZNF542P-206ENST00000490123 PDE3AQ14432 1141 aa13.6□□□□□ -0.23
ZNF542P-206ENST00000490123 U2AF1L5P0DN76 240 aaPredicted RBP13.59□□□□□ -0.23
ZNF542P-206ENST00000490123 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.23
ZNF542P-206ENST00000490123 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.23
ZNF542P-206ENST00000490123 XRCC6P12956 609 aaKnown RBP eCLIP13.58□□□□□ -0.23
ZNF542P-206ENST00000490123 RAPGEF6Q8TEU7 1601 aa13.58□□□□□ -0.24
ZNF542P-206ENST00000490123 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
ZNF542P-206ENST00000490123 SMC4Q9NTJ3 1288 aa13.58□□□□□ -0.24
ZNF542P-206ENST00000490123 GBP4Q96PP9 640 aa13.58□□□□□ -0.24
ZNF542P-206ENST00000490123 EIF3AQ14152 1382 aaKnown RBP13.58□□□□□ -0.24
ZNF542P-206ENST00000490123 ATP10BO94823 1461 aa13.58□□□□□ -0.24
ZNF542P-206ENST00000490123 MRE11P49959 708 aa13.57□□□□□ -0.24
ZNF542P-206ENST00000490123 TESK2Q96S53 571 aa13.57□□□□□ -0.24
ZNF542P-206ENST00000490123 ARHGEF11O15085 1522 aa13.56□□□□□ -0.24
ZNF542P-206ENST00000490123 DDX11L8A8MPP1 907 aa13.56□□□□□ -0.24
ZNF542P-206ENST00000490123 MSNP26038 577 aaKnown RBP13.56□□□□□ -0.24
ZNF542P-206ENST00000490123 SHROOM2Q13796 1616 aa13.55□□□□□ -0.24
ZNF542P-206ENST00000490123 ZBTB7CA1YPR0 619 aa13.55□□□□□ -0.24
ZNF542P-206ENST00000490123 TCP11L2Q8N4U5 519 aa13.54□□□□□ -0.24
ZNF542P-206ENST00000490123 PLEKHH2Q8IVE3 1493 aa13.54□□□□□ -0.24
ZNF542P-206ENST00000490123 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
ZNF542P-206ENST00000490123 GRPEL1Q9HAV7 217 aa13.53□□□□□ -0.24
ZNF542P-206ENST00000490123 KDM5CP41229 1560 aa13.53□□□□□ -0.24
ZNF542P-206ENST00000490123 ESPNB1AK53 854 aa13.53□□□□□ -0.24
ZNF542P-206ENST00000490123 ZKSCAN2Q63HK3 967 aa13.53□□□□□ -0.24
ZNF542P-206ENST00000490123 TNNQ9UQP3 1299 aa13.53□□□□□ -0.24
ZNF542P-206ENST00000490123 NKTRP30414 1462 aaKnown RBP13.52□□□□□ -0.24
ZNF542P-206ENST00000490123 PCDHB15Q9Y5E8 787 aa13.52□□□□□ -0.24
ZNF542P-206ENST00000490123 GPATCH8Q9UKJ3 1502 aaKnown RBP13.52□□□□□ -0.24
ZNF542P-206ENST00000490123 UHRF1BP1Q6BDS2 1440 aa13.52□□□□□ -0.24
ZNF542P-206ENST00000490123 TBC1D32Q96NH3 1257 aa13.52□□□□□ -0.25
ZNF542P-206ENST00000490123 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
ZNF542P-206ENST00000490123 KIF14Q15058 1648 aa13.52□□□□□ -0.25
ZNF542P-206ENST00000490123 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
ZNF542P-206ENST00000490123 DZIP1LQ8IYY4 767 aaKnown RBP13.52□□□□□ -0.25
ZNF542P-206ENST00000490123 AMER1Q5JTC6 1135 aaPredicted RBP13.51□□□□□ -0.25
ZNF542P-206ENST00000490123 LNPKQ9C0E8 428 aa13.51□□□□□ -0.25
ZNF542P-206ENST00000490123 DNMT1P26358 1616 aaKnown RBP13.51□□□□□ -0.25
ZNF542P-206ENST00000490123 SAFB2Q14151 953 aaKnown RBP eCLIP13.51□□□□□ -0.25
ZNF542P-206ENST00000490123 RSPH4AQ5TD94 716 aa13.51□□□□□ -0.25
ZNF542P-206ENST00000490123 ABCA8O94911 1581 aa13.51□□□□□ -0.25
ZNF542P-206ENST00000490123 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
ZNF542P-206ENST00000490123 ZMYND15Q9H091 742 aa13.5□□□□□ -0.25
ZNF542P-206ENST00000490123 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
ZNF542P-206ENST00000490123 TRAK1Q9UPV9 953 aa13.49□□□□□ -0.25
ZNF542P-206ENST00000490123 PRAG1Q86YV5 1406 aa13.49□□□□□ -0.25
ZNF542P-206ENST00000490123 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
ZNF542P-206ENST00000490123 BLMP54132 1417 aaPredicted RBP13.49□□□□□ -0.25
ZNF542P-206ENST00000490123 PTMAP06454 111 aaKnown RBP13.48□□□□□ -0.25
ZNF542P-206ENST00000490123 CFAP70Q5T0N1 1121 aa13.48□□□□□ -0.25
ZNF542P-206ENST00000490123 TSR2Q969E8 191 aaKnown RBP13.48□□□□□ -0.25
ZNF542P-206ENST00000490123 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
ZNF542P-206ENST00000490123 RLBP1P12271 317 aa13.48□□□□□ -0.25
ZNF542P-206ENST00000490123 ZMYM4Q5VZL5 1548 aa13.47□□□□□ -0.25
ZNF542P-206ENST00000490123 CLCN1P35523 988 aa13.47□□□□□ -0.25
ZNF542P-206ENST00000490123 DNTTIP2Q5QJE6 756 aaKnown RBP13.47□□□□□ -0.25
ZNF542P-206ENST00000490123 NGEFQ8N5V2 710 aa13.47□□□□□ -0.25
ZNF542P-206ENST00000490123 ABCC2Q92887 1545 aa13.47□□□□□ -0.25
ZNF542P-206ENST00000490123 RRP9O43818 475 aaKnown RBP13.47□□□□□ -0.25
ZNF542P-206ENST00000490123 ANKRD45Q5TZF3 282 aa13.47□□□□□ -0.25
ZNF542P-206ENST00000490123 MTHFSP49914 203 aa13.46□□□□□ -0.25
ZNF542P-206ENST00000490123 FAM13BQ9NYF5 915 aa13.46□□□□□ -0.25
ZNF542P-206ENST00000490123 APBB1O00213 710 aa13.46□□□□□ -0.26
ZNF542P-206ENST00000490123 SLC24A1O60721 1099 aa13.46□□□□□ -0.26
ZNF542P-206ENST00000490123 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.26
ZNF542P-206ENST00000490123 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.26
ZNF542P-206ENST00000490123 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.26
ZNF542P-206ENST00000490123 RBM10P98175 930 aaKnown RBP13.45□□□□□ -0.26
ZNF542P-206ENST00000490123 USP19O94966 1318 aa13.45□□□□□ -0.26
ZNF542P-206ENST00000490123 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
ZNF542P-206ENST00000490123 CALD1Q05682 793 aaKnown RBP13.45□□□□□ -0.26
ZNF542P-206ENST00000490123 IPO8O15397 1037 aaKnown RBP13.44□□□□□ -0.26
ZNF542P-206ENST00000490123 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
ZNF542P-206ENST00000490123 ARHGEF12Q9NZN5 1544 aa13.44□□□□□ -0.26
ZNF542P-206ENST00000490123 NASPP49321 788 aaPredicted RBP13.44□□□□□ -0.26
ZNF542P-206ENST00000490123 SKOR2Q2VWA4 1001 aaPredicted RBP13.44□□□□□ -0.26
ZNF542P-206ENST00000490123 FOXD4L5Q5VV16 416 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms