RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 SMYD5Q6GMV2 418 aa8.02□□□□□ -1.13
IFRD1-215ENST00000489994 DHX37Q8IY37 1157 aaKnown RBP8.02□□□□□ -1.13
IFRD1-215ENST00000489994 PBRM1Q86U86 1689 aa8.02□□□□□ -1.13
IFRD1-215ENST00000489994 HSP90B1P14625 803 aaKnown RBP8.01□□□□□ -1.13
IFRD1-215ENST00000489994 BCL2L12Q9HB09 334 aa8.01□□□□□ -1.13
IFRD1-215ENST00000489994 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
IFRD1-215ENST00000489994 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
IFRD1-215ENST00000489994 KIF13AQ9H1H9 1805 aa8□□□□□ -1.13
IFRD1-215ENST00000489994 SOGA1O94964 1423 aa8□□□□□ -1.13
IFRD1-215ENST00000489994 MAGI1Q96QZ7 1491 aaPredicted RBP8□□□□□ -1.13
IFRD1-215ENST00000489994 GRXCR2A6NFK2 248 aa8□□□□□ -1.13
IFRD1-215ENST00000489994 HMGB1P09429 215 aaKnown RBP8□□□□□ -1.13
IFRD1-215ENST00000489994 PTPREP23469 700 aa8□□□□□ -1.13
IFRD1-215ENST00000489994 GAPVD1Q14C86 1478 aa7.99□□□□□ -1.13
IFRD1-215ENST00000489994 FGD5Q6ZNL6 1462 aa7.99□□□□□ -1.13
IFRD1-215ENST00000489994 ZNF326Q5BKZ1 582 aaKnown RBP7.98□□□□□ -1.13
IFRD1-215ENST00000489994 KCNK17Q96T54 332 aa7.98□□□□□ -1.13
IFRD1-215ENST00000489994 ADAM33Q9BZ11 813 aa7.98□□□□□ -1.13
IFRD1-215ENST00000489994 AXIN2Q9Y2T1 843 aa7.98□□□□□ -1.13
IFRD1-215ENST00000489994 ZMYND10O75800 440 aa7.98□□□□□ -1.13
IFRD1-215ENST00000489994 LSM11P83369 360 aaKnown RBP eCLIP7.98□□□□□ -1.13
IFRD1-215ENST00000489994 POTEEQ6S8J3 1075 aa7.98□□□□□ -1.13
IFRD1-215ENST00000489994 SYNJ2O15056 1496 aa7.97□□□□□ -1.13
IFRD1-215ENST00000489994 CHMP7Q8WUX9 453 aaPredicted RBP7.97□□□□□ -1.13
IFRD1-215ENST00000489994 GRIN2BQ13224 1484 aa7.97□□□□□ -1.13
IFRD1-215ENST00000489994 CUX1P39880 1505 aa7.97□□□□□ -1.13
IFRD1-215ENST00000489994 ERCC6L2Q5T890 1561 aa7.96□□□□□ -1.13
IFRD1-215ENST00000489994 PSEN2P49810 448 aa7.96□□□□□ -1.14
IFRD1-215ENST00000489994 ERICH6BQ5W0A0 696 aa7.96□□□□□ -1.14
IFRD1-215ENST00000489994 RBM33Q96EV2 1170 aaKnown RBP7.96□□□□□ -1.14
IFRD1-215ENST00000489994 EN1Q05925 392 aaPredicted RBP7.95□□□□□ -1.14
IFRD1-215ENST00000489994 ANKRD13DQ6ZTN6 518 aa7.95□□□□□ -1.14
IFRD1-215ENST00000489994 MAP3K7O43318 606 aa7.95□□□□□ -1.14
IFRD1-215ENST00000489994 UBTFP17480 764 aaKnown RBP7.95□□□□□ -1.14
IFRD1-215ENST00000489994 C6orf132Q5T0Z8 1188 aa7.94□□□□□ -1.14
IFRD1-215ENST00000489994 ABCA5Q8WWZ7 1642 aa7.93□□□□□ -1.14
IFRD1-215ENST00000489994 OSBPP22059 807 aa7.93□□□□□ -1.14
IFRD1-215ENST00000489994 MLLT3P42568 568 aaPredicted RBP7.93□□□□□ -1.14
IFRD1-215ENST00000489994 BCCIPQ9P287 314 aaKnown RBP eCLIP7.93□□□□□ -1.14
IFRD1-215ENST00000489994 PPP1R3GB7ZBB8 358 aa7.92□□□□□ -1.14
IFRD1-215ENST00000489994 TK2O00142 265 aa7.92□□□□□ -1.14
IFRD1-215ENST00000489994 RSPH4AQ5TD94 716 aa7.92□□□□□ -1.14
IFRD1-215ENST00000489994 DMRTA1Q5VZB9 504 aa7.92□□□□□ -1.14
IFRD1-215ENST00000489994 BARGINQ6ZT62 677 aa7.92□□□□□ -1.14
IFRD1-215ENST00000489994 SHROOM2Q13796 1616 aa7.91□□□□□ -1.14
IFRD1-215ENST00000489994 CEP170Q5SW79 1584 aa7.91□□□□□ -1.14
IFRD1-215ENST00000489994 ADGRD1Q6QNK2 874 aa7.91□□□□□ -1.14
IFRD1-215ENST00000489994 AK7Q96M32 723 aa7.91□□□□□ -1.14
IFRD1-215ENST00000489994 SLC4A5Q9BY07 1137 aa7.91□□□□□ -1.14
IFRD1-215ENST00000489994 KRI1Q8N9T8 703 aaKnown RBP7.9□□□□□ -1.14
IFRD1-215ENST00000489994 CERKQ8TCT0 537 aa7.89□□□□□ -1.15
IFRD1-215ENST00000489994 ZBED2Q9BTP6 218 aa7.89□□□□□ -1.15
IFRD1-215ENST00000489994 CLSPNQ9HAW4 1339 aa7.89□□□□□ -1.15
IFRD1-215ENST00000489994 TSR1Q2NL82 804 aaKnown RBP7.89□□□□□ -1.15
IFRD1-215ENST00000489994 STAC3Q96MF2 364 aa7.89□□□□□ -1.15
IFRD1-215ENST00000489994 COL9A1P20849 921 aa7.88□□□□□ -1.15
IFRD1-215ENST00000489994 ZEB1P37275 1124 aaPredicted RBP7.88□□□□□ -1.15
IFRD1-215ENST00000489994 VPS9D1Q9Y2B5 631 aa7.88□□□□□ -1.15
IFRD1-215ENST00000489994 ABCA10Q8WWZ4 1543 aa7.88□□□□□ -1.15
IFRD1-215ENST00000489994 GRIN2AQ12879 1464 aa7.88□□□□□ -1.15
IFRD1-215ENST00000489994 ADAMTS12P58397 1594 aa7.87□□□□□ -1.15
IFRD1-215ENST00000489994 PRIM1P49642 420 aaKnown RBP7.87□□□□□ -1.15
IFRD1-215ENST00000489994 AAMPQ13685 434 aa7.87□□□□□ -1.15
IFRD1-215ENST00000489994 GPIHBP1Q8IV16 184 aa7.86□□□□□ -1.15
IFRD1-215ENST00000489994 IL27Q8NEV9 243 aa7.86□□□□□ -1.15
IFRD1-215ENST00000489994 RSPH6AQ9H0K4 717 aa7.86□□□□□ -1.15
IFRD1-215ENST00000489994 GPBP1L1Q9HC44 474 aaPredicted RBP7.86□□□□□ -1.15
IFRD1-215ENST00000489994 NUP160Q12769 1436 aa7.86□□□□□ -1.15
IFRD1-215ENST00000489994 TSPOAP1O95153 1857 aa7.86□□□□□ -1.15
IFRD1-215ENST00000489994 ZMYND15Q9H091 742 aa7.86□□□□□ -1.15
IFRD1-215ENST00000489994 ONECUT3O60422 494 aaPredicted RBP7.85□□□□□ -1.15
IFRD1-215ENST00000489994 NUTM2FA1L443 756 aa7.84□□□□□ -1.15
IFRD1-215ENST00000489994 HRO43593 1189 aa7.84□□□□□ -1.15
IFRD1-215ENST00000489994 RBM26Q5T8P6 1007 aaKnown RBP7.84□□□□□ -1.15
IFRD1-215ENST00000489994 NBPF3Q9H094 633 aa7.84□□□□□ -1.15
IFRD1-215ENST00000489994 CDHR5Q9HBB8 845 aa7.84□□□□□ -1.15
IFRD1-215ENST00000489994 MYT1LQ9UL68 1186 aa7.84□□□□□ -1.15
IFRD1-215ENST00000489994 TRIM6-TRIM34B2RNG4 842 aa7.83□□□□□ -1.16
IFRD1-215ENST00000489994 PROX2Q3B8N5 592 aa7.83□□□□□ -1.16
IFRD1-215ENST00000489994 RABGEF1Q9UJ41 708 aa7.83□□□□□ -1.16
IFRD1-215ENST00000489994 ACIN1Q9UKV3 1341 aaKnown RBP7.83□□□□□ -1.16
IFRD1-215ENST00000489994 IGSF3O75054 1194 aa7.83□□□□□ -1.16
IFRD1-215ENST00000489994 PRSS12P56730 875 aa7.83□□□□□ -1.16
IFRD1-215ENST00000489994 GLIPR1L2Q4G1C9 344 aa7.83□□□□□ -1.16
IFRD1-215ENST00000489994 NAP1L5Q96NT1 182 aaPredicted RBP7.83□□□□□ -1.16
IFRD1-215ENST00000489994 KDM4CQ9H3R0 1056 aa7.83□□□□□ -1.16
IFRD1-215ENST00000489994 PACS2Q86VP3 889 aa7.82□□□□□ -1.16
IFRD1-215ENST00000489994 CDCA7LQ96GN5 454 aa7.82□□□□□ -1.16
IFRD1-215ENST00000489994 CCDC136Q96JN2 1154 aa7.82□□□□□ -1.16
IFRD1-215ENST00000489994 POLR3GLQ9BT43 218 aa7.82□□□□□ -1.16
IFRD1-215ENST00000489994 RBM27Q9P2N5 1060 aaKnown RBP7.82□□□□□ -1.16
IFRD1-215ENST00000489994 DIP2BQ9P265 1576 aa7.81□□□□□ -1.16
IFRD1-215ENST00000489994 BHMG1C9JSJ3 638 aaPredicted RBP7.81□□□□□ -1.16
IFRD1-215ENST00000489994 MRPL50Q8N5N7 158 aaKnown RBP7.81□□□□□ -1.16
IFRD1-215ENST00000489994 KIAA1468Q9P260 1216 aa7.81□□□□□ -1.16
IFRD1-215ENST00000489994 BIVM-ERCC5R4GMW8 1640 aa7.81□□□□□ -1.16
IFRD1-215ENST00000489994 NPDC1Q9NQX5 325 aaPredicted RBP7.81□□□□□ -1.16
IFRD1-215ENST00000489994 ABCC10Q5T3U5 1492 aa7.8□□□□□ -1.16
IFRD1-215ENST00000489994 GOLGA8CPA6NN73 597 aa7.8□□□□□ -1.16
IFRD1-215ENST00000489994 FCHSD2O94868 740 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms