RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
IFRD1-215ENST00000489994 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
IFRD1-215ENST00000489994 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
IFRD1-215ENST00000489994 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
IFRD1-215ENST00000489994 POTEDQ86YR6 584 aa14.81□□□□□ -0.04
IFRD1-215ENST00000489994 PLPPR3Q6T4P5 718 aa14.46□□□□□ -0.1
IFRD1-215ENST00000489994 FOXD1Q16676 465 aa14.45□□□□□ -0.1
IFRD1-215ENST00000489994 ADRA2BP18089 450 aa13.8□□□□□ -0.2
IFRD1-215ENST00000489994 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
IFRD1-215ENST00000489994 PIAS4Q8N2W9 510 aaPredicted RBP13.64□□□□□ -0.23
IFRD1-215ENST00000489994 MSH5O43196 834 aa13.43□□□□□ -0.26
IFRD1-215ENST00000489994 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
IFRD1-215ENST00000489994 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
IFRD1-215ENST00000489994 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
IFRD1-215ENST00000489994 DMRT2Q9Y5R5 561 aa12.42□□□□□ -0.42
IFRD1-215ENST00000489994 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.43
IFRD1-215ENST00000489994 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.43
IFRD1-215ENST00000489994 KCNA4P22459 653 aa12.26□□□□□ -0.45
IFRD1-215ENST00000489994 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
IFRD1-215ENST00000489994 NPM3O75607 178 aaKnown RBP12.14□□□□□ -0.47
IFRD1-215ENST00000489994 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
IFRD1-215ENST00000489994 CACNB1Q02641 598 aaPredicted RBP11.98□□□□□ -0.49
IFRD1-215ENST00000489994 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
IFRD1-215ENST00000489994 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
IFRD1-215ENST00000489994 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
IFRD1-215ENST00000489994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
IFRD1-215ENST00000489994 SLC4A2P04920 1241 aa11.46□□□□□ -0.57
IFRD1-215ENST00000489994 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
IFRD1-215ENST00000489994 RNF39Q9H2S5 420 aa11.46□□□□□ -0.58
IFRD1-215ENST00000489994 FOXD4L1Q9NU39 408 aa11.36□□□□□ -0.59
IFRD1-215ENST00000489994 C1QBPQ07021 282 aaKnown RBP11.35□□□□□ -0.59
IFRD1-215ENST00000489994 U3KPZ7 1027 aaPredicted RBP11.34□□□□□ -0.59
IFRD1-215ENST00000489994 POTEHQ6S545 545 aa11.31□□□□□ -0.6
IFRD1-215ENST00000489994 MYCNP04198 464 aaPredicted RBP11.26□□□□□ -0.61
IFRD1-215ENST00000489994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.26□□□□□ -0.61
IFRD1-215ENST00000489994 HNRNPUL2Q1KMD3 747 aaKnown RBP11.26□□□□□ -0.61
IFRD1-215ENST00000489994 ZBTB22O15209 634 aa11.25□□□□□ -0.61
IFRD1-215ENST00000489994 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
IFRD1-215ENST00000489994 APLP2Q06481 763 aa11.18□□□□□ -0.62
IFRD1-215ENST00000489994 CSRNP3Q8WYN3 585 aa11.13□□□□□ -0.63
IFRD1-215ENST00000489994 CAPN15O75808 1086 aa11.06□□□□□ -0.64
IFRD1-215ENST00000489994 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
IFRD1-215ENST00000489994 ZNF219Q9P2Y4 722 aaPredicted RBP11□□□□□ -0.65
IFRD1-215ENST00000489994 ATXN8OSP0DMR3 200 aa10.99□□□□□ -0.65
IFRD1-215ENST00000489994 NISCHQ9Y2I1 1504 aa10.97□□□□□ -0.65
IFRD1-215ENST00000489994 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
IFRD1-215ENST00000489994 ATF5Q9Y2D1 282 aaPredicted RBP10.89□□□□□ -0.67
IFRD1-215ENST00000489994 DSG3P32926 999 aa10.86□□□□□ -0.67
IFRD1-215ENST00000489994 ABCB7O75027 752 aa10.81□□□□□ -0.68
IFRD1-215ENST00000489994 POLA2Q14181 598 aa10.77□□□□□ -0.69
IFRD1-215ENST00000489994 ZBTB12Q9Y330 459 aaPredicted RBP10.64□□□□□ -0.71
IFRD1-215ENST00000489994 FBLN2P98095 1184 aa10.55□□□□□ -0.72
IFRD1-215ENST00000489994 SLC24A1O60721 1099 aa10.44□□□□□ -0.74
IFRD1-215ENST00000489994 MKRN4PQ13434 485 aaPredicted RBP10.42□□□□□ -0.74
IFRD1-215ENST00000489994 RBM42Q9BTD8 480 aaKnown RBP10.42□□□□□ -0.74
IFRD1-215ENST00000489994 OSCARQ8IYS5 282 aa10.38□□□□□ -0.75
IFRD1-215ENST00000489994 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
IFRD1-215ENST00000489994 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
IFRD1-215ENST00000489994 SPDYE2Q495Y8 402 aa10.32□□□□□ -0.76
IFRD1-215ENST00000489994 PLSCR2Q9NRY7 297 aa10.26□□□□□ -0.77
IFRD1-215ENST00000489994 ZNF692Q9BU19 519 aaPredicted RBP10.25□□□□□ -0.77
IFRD1-215ENST00000489994 AKT1S1Q96B36 256 aa10.24□□□□□ -0.77
IFRD1-215ENST00000489994 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
IFRD1-215ENST00000489994 MYT1Q01538 1121 aa10.2□□□□□ -0.78
IFRD1-215ENST00000489994 AMER1Q5JTC6 1135 aaPredicted RBP10.19□□□□□ -0.78
IFRD1-215ENST00000489994 SSUH2Q9Y2M2 353 aa10.19□□□□□ -0.78
IFRD1-215ENST00000489994 RTN4Q9NQC3 1192 aaKnown RBP10.18□□□□□ -0.78
IFRD1-215ENST00000489994 ABCC9O60706 1549 aa10.16□□□□□ -0.78
IFRD1-215ENST00000489994 REM2Q8IYK8 340 aaPredicted RBP10.11□□□□□ -0.79
IFRD1-215ENST00000489994 SP7Q8TDD2 431 aaPredicted RBP10.1□□□□□ -0.79
IFRD1-215ENST00000489994 FKBP8Q14318 412 aa10.1□□□□□ -0.79
IFRD1-215ENST00000489994 PABPN1Q86U42 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
IFRD1-215ENST00000489994 PELP1Q8IZL8 1130 aaKnown RBP10.06□□□□□ -0.8
IFRD1-215ENST00000489994 TTBK1Q5TCY1 1321 aaPredicted RBP10.05□□□□□ -0.8
IFRD1-215ENST00000489994 SPDYE1Q8NFV5 336 aaPredicted RBP10.04□□□□□ -0.8
IFRD1-215ENST00000489994 CCDC180Q9P1Z9 1646 aa10□□□□□ -0.81
IFRD1-215ENST00000489994 PITPNM1O00562 1244 aa9.99□□□□□ -0.81
IFRD1-215ENST00000489994 CHRDL2Q6WN34 429 aa9.99□□□□□ -0.81
IFRD1-215ENST00000489994 PROM2Q8N271 834 aa9.99□□□□□ -0.81
IFRD1-215ENST00000489994 CLEC11AQ9Y240 323 aa9.99□□□□□ -0.81
IFRD1-215ENST00000489994 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.81
IFRD1-215ENST00000489994 PRR29P0C7W0 189 aa9.9□□□□□ -0.83
IFRD1-215ENST00000489994 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.83
IFRD1-215ENST00000489994 FBXO3Q9UK99 471 aa9.83□□□□□ -0.84
IFRD1-215ENST00000489994 PIP4P2Q8N4L2 257 aa9.82□□□□□ -0.84
IFRD1-215ENST00000489994 PRKAR2AP13861 404 aaKnown RBP9.76□□□□□ -0.85
IFRD1-215ENST00000489994 DAXXQ9UER7 740 aaPredicted RBP9.75□□□□□ -0.85
IFRD1-215ENST00000489994 PLEKHG5O94827 1062 aa9.73□□□□□ -0.85
IFRD1-215ENST00000489994 CHADLQ6NUI6 762 aa9.71□□□□□ -0.85
IFRD1-215ENST00000489994 MIER1Q8N108 512 aa9.7□□□□□ -0.86
IFRD1-215ENST00000489994 CREBZFQ9NS37 354 aa9.7□□□□□ -0.86
IFRD1-215ENST00000489994 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
IFRD1-215ENST00000489994 ERICH6Q7L0X2 663 aa9.68□□□□□ -0.86
IFRD1-215ENST00000489994 VASPP50552 380 aaPredicted RBP9.65□□□□□ -0.87
IFRD1-215ENST00000489994 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
IFRD1-215ENST00000489994 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
IFRD1-215ENST00000489994 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
IFRD1-215ENST00000489994 PRKCSHP14314 528 aaPredicted RBP9.59□□□□□ -0.87
IFRD1-215ENST00000489994 RB1CC1Q8TDY2 1594 aa9.58□□□□□ -0.88
IFRD1-215ENST00000489994 MNX1P50219 401 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms