RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 NAIPQ13075 1403 aa17.95■□□□□ 0.46
SEMA6C-208ENST00000489944 PIK3R4Q99570 1358 aa17.94■□□□□ 0.46
SEMA6C-208ENST00000489944 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
SEMA6C-208ENST00000489944 TBX22Q9Y458 520 aa17.94■□□□□ 0.46
SEMA6C-208ENST00000489944 DIP2AQ14689 1571 aa17.93■□□□□ 0.46
SEMA6C-208ENST00000489944 NWD1Q149M9 1564 aa17.93■□□□□ 0.46
SEMA6C-208ENST00000489944 NCOA3Q9Y6Q9 1424 aa17.93■□□□□ 0.46
SEMA6C-208ENST00000489944 PPARGC1BQ86YN6 1023 aaKnown RBP17.93■□□□□ 0.46
SEMA6C-208ENST00000489944 DISP3Q9P2K9 1392 aa17.91■□□□□ 0.46
SEMA6C-208ENST00000489944 PIP4K2BP78356 416 aa17.9■□□□□ 0.46
SEMA6C-208ENST00000489944 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
SEMA6C-208ENST00000489944 SPHKAPQ2M3C7 1700 aa17.89■□□□□ 0.46
SEMA6C-208ENST00000489944 BCANQ96GW7 911 aa17.89■□□□□ 0.45
SEMA6C-208ENST00000489944 SLC26A8Q96RN1 970 aa17.89■□□□□ 0.45
SEMA6C-208ENST00000489944 ALKQ9UM73 1620 aa17.89■□□□□ 0.45
SEMA6C-208ENST00000489944 CHGAP10645 457 aaKnown RBP17.88■□□□□ 0.45
SEMA6C-208ENST00000489944 MYO5BQ9ULV0 1848 aa17.88■□□□□ 0.45
SEMA6C-208ENST00000489944 TMEM94Q12767 1356 aa17.88■□□□□ 0.45
SEMA6C-208ENST00000489944 HSPA1LP34931 641 aa17.87■□□□□ 0.45
SEMA6C-208ENST00000489944 FAM135BQ49AJ0 1406 aa17.87■□□□□ 0.45
SEMA6C-208ENST00000489944 TRPM2O94759 1503 aa17.87■□□□□ 0.45
SEMA6C-208ENST00000489944 PROSER2Q86WR7 435 aaPredicted RBP17.86■□□□□ 0.45
SEMA6C-208ENST00000489944 CHD2O14647 1828 aaKnown RBP17.85■□□□□ 0.45
SEMA6C-208ENST00000489944 XIRP1Q702N8 1843 aaKnown RBP17.84■□□□□ 0.45
SEMA6C-208ENST00000489944 ADAMTS13Q76LX8 1427 aa17.83■□□□□ 0.45
SEMA6C-208ENST00000489944 MSH6P52701 1360 aa17.83■□□□□ 0.45
SEMA6C-208ENST00000489944 SETBP1Q9Y6X0 1596 aa17.82■□□□□ 0.44
SEMA6C-208ENST00000489944 RPGRIP1LQ68CZ1 1315 aa17.8■□□□□ 0.44
SEMA6C-208ENST00000489944 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
SEMA6C-208ENST00000489944 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
SEMA6C-208ENST00000489944 KIF1BO60333 1816 aa17.78■□□□□ 0.44
SEMA6C-208ENST00000489944 CLTCL1P53675 1640 aa17.77■□□□□ 0.44
SEMA6C-208ENST00000489944 VGFO15240 615 aaPredicted RBP17.77■□□□□ 0.44
SEMA6C-208ENST00000489944 ZNF326Q5BKZ1 582 aaKnown RBP17.77■□□□□ 0.44
SEMA6C-208ENST00000489944 DCCP43146 1447 aa17.75■□□□□ 0.43
SEMA6C-208ENST00000489944 CADPS2Q86UW7 1296 aa17.75■□□□□ 0.43
SEMA6C-208ENST00000489944 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
SEMA6C-208ENST00000489944 MED1Q15648 1581 aaPredicted RBP17.74■□□□□ 0.43
SEMA6C-208ENST00000489944 NEXMIFQ5QGS0 1516 aa17.74■□□□□ 0.43
SEMA6C-208ENST00000489944 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
SEMA6C-208ENST00000489944 AMOTL2Q9Y2J4 779 aa17.73■□□□□ 0.43
SEMA6C-208ENST00000489944 NRXN3Q9Y4C0 1643 aa17.72■□□□□ 0.43
SEMA6C-208ENST00000489944 SOCS7O14512 581 aa17.71■□□□□ 0.43
SEMA6C-208ENST00000489944 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
SEMA6C-208ENST00000489944 ATF3P18847 181 aa17.7■□□□□ 0.42
SEMA6C-208ENST00000489944 NUTM2DQ5VT03 806 aaPredicted RBP17.7■□□□□ 0.42
SEMA6C-208ENST00000489944 PRAG1Q86YV5 1406 aa17.7■□□□□ 0.42
SEMA6C-208ENST00000489944 ROBO1Q9Y6N7 1651 aa17.7■□□□□ 0.42
SEMA6C-208ENST00000489944 C14orf37Q86TY3 774 aa17.69■□□□□ 0.42
SEMA6C-208ENST00000489944 CCDC144AA2RUR9 1427 aa17.69■□□□□ 0.42
SEMA6C-208ENST00000489944 PTPRUQ92729 1446 aa17.68■□□□□ 0.42
SEMA6C-208ENST00000489944 MPHOSPH9Q99550 1183 aa17.68■□□□□ 0.42
SEMA6C-208ENST00000489944 SETD5Q9C0A6 1442 aa17.67■□□□□ 0.42
SEMA6C-208ENST00000489944 ILDR2Q71H61 639 aa17.67■□□□□ 0.42
SEMA6C-208ENST00000489944 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
SEMA6C-208ENST00000489944 ANKRD30BQ9BXX2 1392 aa17.66■□□□□ 0.42
SEMA6C-208ENST00000489944 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.65■□□□□ 0.42
SEMA6C-208ENST00000489944 METP08581 1390 aa17.65■□□□□ 0.42
SEMA6C-208ENST00000489944 PTCH1Q13635 1447 aa17.64■□□□□ 0.42
SEMA6C-208ENST00000489944 HRCP23327 699 aa17.64■□□□□ 0.41
SEMA6C-208ENST00000489944 RBM33Q96EV2 1170 aaKnown RBP17.64■□□□□ 0.41
SEMA6C-208ENST00000489944 JCADQ9P266 1359 aa17.63■□□□□ 0.41
SEMA6C-208ENST00000489944 PPLO60437 1756 aa17.62■□□□□ 0.41
SEMA6C-208ENST00000489944 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
SEMA6C-208ENST00000489944 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
SEMA6C-208ENST00000489944 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
SEMA6C-208ENST00000489944 SPATA31E1Q6ZUB1 1445 aa17.61■□□□□ 0.41
SEMA6C-208ENST00000489944 PHLPP1O60346 1717 aa17.6■□□□□ 0.41
SEMA6C-208ENST00000489944 SPATA31A6Q5VVP1 1343 aa17.59■□□□□ 0.41
SEMA6C-208ENST00000489944 SETD1AO15047 1707 aaKnown RBP17.58■□□□□ 0.41
SEMA6C-208ENST00000489944 COL16A1Q07092 1604 aaPredicted RBP17.57■□□□□ 0.4
SEMA6C-208ENST00000489944 MST1RQ04912 1400 aa17.56■□□□□ 0.4
SEMA6C-208ENST00000489944 STAC3Q96MF2 364 aa17.56■□□□□ 0.4
SEMA6C-208ENST00000489944 BRINP3Q76B58 766 aa17.55■□□□□ 0.4
SEMA6C-208ENST00000489944 RAB3GAP2Q9H2M9 1393 aa17.54■□□□□ 0.4
SEMA6C-208ENST00000489944 TECPR2O15040 1411 aa17.54■□□□□ 0.4
SEMA6C-208ENST00000489944 IFT172Q9UG01 1749 aa17.53■□□□□ 0.4
SEMA6C-208ENST00000489944 FOXD1Q16676 465 aa17.53■□□□□ 0.4
SEMA6C-208ENST00000489944 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.4
SEMA6C-208ENST00000489944 SIRT1Q96EB6 747 aa17.52■□□□□ 0.4
SEMA6C-208ENST00000489944 PIK3C2GO75747 1445 aa17.52■□□□□ 0.4
SEMA6C-208ENST00000489944 ABCC11Q96J66 1382 aa17.52■□□□□ 0.39
SEMA6C-208ENST00000489944 SHPRHQ149N8 1683 aa17.52■□□□□ 0.39
SEMA6C-208ENST00000489944 MYOM2P54296 1465 aa17.51■□□□□ 0.39
SEMA6C-208ENST00000489944 NALCNQ8IZF0 1738 aa17.51■□□□□ 0.39
SEMA6C-208ENST00000489944 LRRC59Q96AG4 307 aaKnown RBP17.51■□□□□ 0.39
SEMA6C-208ENST00000489944 LRPPRCP42704 1394 aaKnown RBP17.51■□□□□ 0.39
SEMA6C-208ENST00000489944 ROBO2Q9HCK4 1378 aa17.51■□□□□ 0.39
SEMA6C-208ENST00000489944 RGL3Q3MIN7 710 aa17.5■□□□□ 0.39
SEMA6C-208ENST00000489944 LAMC1P11047 1609 aa17.5■□□□□ 0.39
SEMA6C-208ENST00000489944 ADGRF5Q8IZF2 1346 aa17.49■□□□□ 0.39
SEMA6C-208ENST00000489944 NHSL1Q5SYE7 1610 aa17.49■□□□□ 0.39
SEMA6C-208ENST00000489944 NRXN1Q9ULB1 1477 aa17.49■□□□□ 0.39
SEMA6C-208ENST00000489944 C1orf167Q5SNV9 1468 aa17.48■□□□□ 0.39
SEMA6C-208ENST00000489944 CDC42BPGQ6DT37 1551 aa17.48■□□□□ 0.39
SEMA6C-208ENST00000489944 KNDC1Q76NI1 1749 aa17.47■□□□□ 0.39
SEMA6C-208ENST00000489944 C14orf93Q9H972 538 aaKnown RBP17.46■□□□□ 0.39
SEMA6C-208ENST00000489944 RGS17Q9UGC6 210 aaPredicted RBP17.46■□□□□ 0.39
SEMA6C-208ENST00000489944 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
SEMA6C-208ENST00000489944 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms