RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 ZFYVE9O95405 1425 aa35.83■■■■□ 3.33
PTPN18-213ENST00000489215 BCANQ96GW7 911 aa35.82■■■■□ 3.32
PTPN18-213ENST00000489215 PLEKHG1Q9ULL1 1385 aa35.79■■■■□ 3.32
PTPN18-213ENST00000489215 TRPM2O94759 1503 aa35.78■■■■□ 3.32
PTPN18-213ENST00000489215 SETD5Q9C0A6 1442 aa35.76■■■■□ 3.32
PTPN18-213ENST00000489215 UBAP1LF5GYI3 381 aa35.76■■■■□ 3.32
PTPN18-213ENST00000489215 TOM1O60784 492 aa35.73■■■■□ 3.31
PTPN18-213ENST00000489215 SLC26A8Q96RN1 970 aa35.73■■■■□ 3.31
PTPN18-213ENST00000489215 STRCP1A6NGW2 1772 aa35.72■■■■□ 3.31
PTPN18-213ENST00000489215 KCNA6P17658 529 aa35.71■■■■□ 3.31
PTPN18-213ENST00000489215 KIF1BO60333 1816 aa35.7■■■■□ 3.31
PTPN18-213ENST00000489215 ZNF326Q5BKZ1 582 aaKnown RBP35.7■■■■□ 3.31
PTPN18-213ENST00000489215 LRRC7Q96NW7 1537 aa35.69■■■■□ 3.3
PTPN18-213ENST00000489215 MPHOSPH9Q99550 1183 aa35.68■■■■□ 3.3
PTPN18-213ENST00000489215 TBX22Q9Y458 520 aa35.68■■■■□ 3.3
PTPN18-213ENST00000489215 CLTCL1P53675 1640 aa35.68■■■■□ 3.3
PTPN18-213ENST00000489215 DIP2AQ14689 1571 aa35.62■■■■□ 3.29
PTPN18-213ENST00000489215 NUTM2DQ5VT03 806 aaPredicted RBP35.61■■■■□ 3.29
PTPN18-213ENST00000489215 PIK3R4Q99570 1358 aa35.59■■■■□ 3.29
PTPN18-213ENST00000489215 RAB3GAP2Q9H2M9 1393 aa35.58■■■■□ 3.29
PTPN18-213ENST00000489215 NKTRP30414 1462 aaKnown RBP35.57■■■■□ 3.28
PTPN18-213ENST00000489215 HRCP23327 699 aa35.57■■■■□ 3.28
PTPN18-213ENST00000489215 RPGRIP1LQ68CZ1 1315 aa35.57■■■■□ 3.28
PTPN18-213ENST00000489215 NWD1Q149M9 1564 aa35.56■■■■□ 3.28
PTPN18-213ENST00000489215 PROSER2Q86WR7 435 aaPredicted RBP35.56■■■■□ 3.28
PTPN18-213ENST00000489215 CHD2O14647 1828 aaKnown RBP35.55■■■■□ 3.28
PTPN18-213ENST00000489215 CCDC144AA2RUR9 1427 aa35.54■■■■□ 3.28
PTPN18-213ENST00000489215 ADAMTS13Q76LX8 1427 aa35.54■■■■□ 3.28
PTPN18-213ENST00000489215 VGFO15240 615 aaPredicted RBP35.53■■■■□ 3.28
PTPN18-213ENST00000489215 FOXD1Q16676 465 aa35.53■■■■□ 3.28
PTPN18-213ENST00000489215 SENP3Q9H4L4 574 aaPredicted RBP35.53■■■■□ 3.28
PTPN18-213ENST00000489215 NEXMIFQ5QGS0 1516 aa35.5■■■■□ 3.27
PTPN18-213ENST00000489215 SCAF1Q9H7N4 1312 aaKnown RBP35.5■■■■□ 3.27
PTPN18-213ENST00000489215 PIP4K2BP78356 416 aa35.49■■■■□ 3.27
PTPN18-213ENST00000489215 SETBP1Q9Y6X0 1596 aa35.49■■■■□ 3.27
PTPN18-213ENST00000489215 TMEM94Q12767 1356 aa35.49■■■■□ 3.27
PTPN18-213ENST00000489215 XIRP1Q702N8 1843 aaKnown RBP35.48■■■■□ 3.27
PTPN18-213ENST00000489215 NCOA3Q9Y6Q9 1424 aa35.43■■■■□ 3.26
PTPN18-213ENST00000489215 NRXN3Q9Y4C0 1643 aa35.39■■■■□ 3.26
PTPN18-213ENST00000489215 MSH6P52701 1360 aa35.38■■■■□ 3.26
PTPN18-213ENST00000489215 AMOTL2Q9Y2J4 779 aa35.38■■■■□ 3.25
PTPN18-213ENST00000489215 ALKQ9UM73 1620 aa35.38■■■■□ 3.25
PTPN18-213ENST00000489215 PPLO60437 1756 aa35.36■■■■□ 3.25
PTPN18-213ENST00000489215 SPATA31E1Q6ZUB1 1445 aa35.33■■■■□ 3.25
PTPN18-213ENST00000489215 ANKRD30BQ9BXX2 1392 aa35.33■■■■□ 3.25
PTPN18-213ENST00000489215 RGL3Q3MIN7 710 aa35.32■■■■□ 3.24
PTPN18-213ENST00000489215 RBM33Q96EV2 1170 aaKnown RBP35.31■■■■□ 3.24
PTPN18-213ENST00000489215 C14orf37Q86TY3 774 aa35.29■■■■□ 3.24
PTPN18-213ENST00000489215 PTPRUQ92729 1446 aa35.29■■■■□ 3.24
PTPN18-213ENST00000489215 METP08581 1390 aa35.28■■■■□ 3.24
PTPN18-213ENST00000489215 HSPA1LP34931 641 aa35.28■■■■□ 3.24
PTPN18-213ENST00000489215 FAM135BQ49AJ0 1406 aa35.26■■■■□ 3.24
PTPN18-213ENST00000489215 C19orf44Q9H6X5 657 aa35.26■■■■□ 3.24
PTPN18-213ENST00000489215 XRN1Q8IZH2 1706 aaKnown RBP35.25■■■■□ 3.23
PTPN18-213ENST00000489215 CADPS2Q86UW7 1296 aa35.22■■■■□ 3.23
PTPN18-213ENST00000489215 IFT172Q9UG01 1749 aa35.2■■■■□ 3.23
PTPN18-213ENST00000489215 SLAIN2Q9P270 581 aa35.2■■■■□ 3.23
PTPN18-213ENST00000489215 ATF3P18847 181 aa35.19■■■■□ 3.22
PTPN18-213ENST00000489215 ADGRF5Q8IZF2 1346 aa35.17■■■■□ 3.22
PTPN18-213ENST00000489215 SETD1AO15047 1707 aaKnown RBP35.17■■■■□ 3.22
PTPN18-213ENST00000489215 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.14■■■■□ 3.22
PTPN18-213ENST00000489215 DCCP43146 1447 aa35.13■■■■□ 3.21
PTPN18-213ENST00000489215 STAC3Q96MF2 364 aa35.11■■■■□ 3.21
PTPN18-213ENST00000489215 PTCH1Q13635 1447 aa35.11■■■■□ 3.21
PTPN18-213ENST00000489215 PRAG1Q86YV5 1406 aa35.1■■■■□ 3.21
PTPN18-213ENST00000489215 ROBO1Q9Y6N7 1651 aa35.1■■■■□ 3.21
PTPN18-213ENST00000489215 PIK3C2GO75747 1445 aa35.08■■■■□ 3.21
PTPN18-213ENST00000489215 MYOM2P54296 1465 aa35.08■■■■□ 3.21
PTPN18-213ENST00000489215 DISP3Q9P2K9 1392 aa35.05■■■■□ 3.2
PTPN18-213ENST00000489215 ADGRL3Q9HAR2 1447 aa35.04■■■■□ 3.2
PTPN18-213ENST00000489215 NRXN1Q9ULB1 1477 aa35.02■■■■□ 3.2
PTPN18-213ENST00000489215 C14orf93Q9H972 538 aaKnown RBP35.01■■■■□ 3.2
PTPN18-213ENST00000489215 ROBO2Q9HCK4 1378 aa35■■■■□ 3.19
PTPN18-213ENST00000489215 LAMC1P11047 1609 aa34.99■■■■□ 3.19
PTPN18-213ENST00000489215 LRPPRCP42704 1394 aaKnown RBP34.98■■■■□ 3.19
PTPN18-213ENST00000489215 ABCC11Q96J66 1382 aa34.97■■■■□ 3.19
PTPN18-213ENST00000489215 DCAF11Q8TEB1 546 aa34.95■■■■□ 3.19
PTPN18-213ENST00000489215 TECPR2O15040 1411 aa34.95■■■■□ 3.19
PTPN18-213ENST00000489215 DHX57Q6P158 1386 aaKnown RBP34.94■■■■□ 3.18
PTPN18-213ENST00000489215 NALCNQ8IZF0 1738 aa34.94■■■■□ 3.18
PTPN18-213ENST00000489215 TMEM132EQ6IEE7 984 aa34.93■■■■□ 3.18
PTPN18-213ENST00000489215 SIRT1Q96EB6 747 aa34.92■■■■□ 3.18
PTPN18-213ENST00000489215 STK26Q9P289 416 aa34.92■■■■□ 3.18
PTPN18-213ENST00000489215 TRIM26Q12899 539 aaPredicted RBP34.91■■■■□ 3.18
PTPN18-213ENST00000489215 PHLPP1O60346 1717 aa34.91■■■■□ 3.18
PTPN18-213ENST00000489215 MST1RQ04912 1400 aa34.9■■■■□ 3.18
PTPN18-213ENST00000489215 YTHDC2Q9H6S0 1430 aaKnown RBP34.9■■■■□ 3.18
PTPN18-213ENST00000489215 KNDC1Q76NI1 1749 aa34.9■■■■□ 3.18
PTPN18-213ENST00000489215 CFAP70Q5T0N1 1121 aa34.9■■■■□ 3.18
PTPN18-213ENST00000489215 KDM2AQ9Y2K7 1162 aa34.9■■■■□ 3.18
PTPN18-213ENST00000489215 BRINP3Q76B58 766 aa34.88■■■■□ 3.17
PTPN18-213ENST00000489215 MED1Q15648 1581 aaPredicted RBP34.87■■■■□ 3.17
PTPN18-213ENST00000489215 ASXL1Q8IXJ9 1541 aa34.86■■■■□ 3.17
PTPN18-213ENST00000489215 AHDC1Q5TGY3 1603 aaPredicted RBP34.84■■■■□ 3.17
PTPN18-213ENST00000489215 JCADQ9P266 1359 aa34.81■■■■□ 3.16
PTPN18-213ENST00000489215 WAPLQ7Z5K2 1190 aa34.8■■■■□ 3.16
PTPN18-213ENST00000489215 C1orf167Q5SNV9 1468 aa34.78■■■■□ 3.16
PTPN18-213ENST00000489215 CDC42BPGQ6DT37 1551 aa34.78■■■■□ 3.16
PTPN18-213ENST00000489215 COL16A1Q07092 1604 aaPredicted RBP34.77■■■■□ 3.16
PTPN18-213ENST00000489215 PHF23Q9BUL5 403 aaPredicted RBP34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms