RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 PLEKHG1Q9ULL1 1385 aa19.03■□□□□ 0.64
SRRM1-216ENST00000489130 PIP4K2BP78356 416 aa19.02■□□□□ 0.64
SRRM1-216ENST00000489130 SLC26A8Q96RN1 970 aa19.02■□□□□ 0.64
SRRM1-216ENST00000489130 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
SRRM1-216ENST00000489130 KCNA6P17658 529 aa19■□□□□ 0.63
SRRM1-216ENST00000489130 NWD1Q149M9 1564 aa19■□□□□ 0.63
SRRM1-216ENST00000489130 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
SRRM1-216ENST00000489130 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
SRRM1-216ENST00000489130 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
SRRM1-216ENST00000489130 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
SRRM1-216ENST00000489130 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.99■□□□□ 0.63
SRRM1-216ENST00000489130 NKTRP30414 1462 aaKnown RBP18.98■□□□□ 0.63
SRRM1-216ENST00000489130 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
SRRM1-216ENST00000489130 DISP3Q9P2K9 1392 aa18.96■□□□□ 0.63
SRRM1-216ENST00000489130 HSPA1LP34931 641 aa18.96■□□□□ 0.63
SRRM1-216ENST00000489130 BCANQ96GW7 911 aa18.96■□□□□ 0.63
SRRM1-216ENST00000489130 TMEM94Q12767 1356 aa18.95■□□□□ 0.62
SRRM1-216ENST00000489130 TRPM2O94759 1503 aa18.95■□□□□ 0.62
SRRM1-216ENST00000489130 DIP2AQ14689 1571 aa18.93■□□□□ 0.62
SRRM1-216ENST00000489130 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
SRRM1-216ENST00000489130 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
SRRM1-216ENST00000489130 CLTCL1P53675 1640 aa18.92■□□□□ 0.62
SRRM1-216ENST00000489130 NUTM2DQ5VT03 806 aaPredicted RBP18.91■□□□□ 0.62
SRRM1-216ENST00000489130 PROSER2Q86WR7 435 aaPredicted RBP18.9■□□□□ 0.62
SRRM1-216ENST00000489130 CHD2O14647 1828 aaKnown RBP18.9■□□□□ 0.62
SRRM1-216ENST00000489130 TRIM52Q96A61 297 aa18.89■□□□□ 0.61
SRRM1-216ENST00000489130 PIK3R4Q99570 1358 aa18.89■□□□□ 0.61
SRRM1-216ENST00000489130 RBM33Q96EV2 1170 aaKnown RBP18.87■□□□□ 0.61
SRRM1-216ENST00000489130 SETBP1Q9Y6X0 1596 aa18.87■□□□□ 0.61
SRRM1-216ENST00000489130 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
SRRM1-216ENST00000489130 NRXN3Q9Y4C0 1643 aa18.85■□□□□ 0.61
SRRM1-216ENST00000489130 NEXMIFQ5QGS0 1516 aa18.85■□□□□ 0.61
SRRM1-216ENST00000489130 FAM135BQ49AJ0 1406 aa18.85■□□□□ 0.61
SRRM1-216ENST00000489130 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
SRRM1-216ENST00000489130 NCOA3Q9Y6Q9 1424 aa18.84■□□□□ 0.61
SRRM1-216ENST00000489130 MSH6P52701 1360 aa18.84■□□□□ 0.61
SRRM1-216ENST00000489130 MED1Q15648 1581 aaPredicted RBP18.82■□□□□ 0.6
SRRM1-216ENST00000489130 KIF1BO60333 1816 aa18.82■□□□□ 0.6
SRRM1-216ENST00000489130 ILDR2Q71H61 639 aa18.82■□□□□ 0.6
SRRM1-216ENST00000489130 PTPRUQ92729 1446 aa18.82■□□□□ 0.6
SRRM1-216ENST00000489130 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
SRRM1-216ENST00000489130 XRN1Q8IZH2 1706 aaKnown RBP18.79■□□□□ 0.6
SRRM1-216ENST00000489130 ROBO1Q9Y6N7 1651 aa18.79■□□□□ 0.6
SRRM1-216ENST00000489130 METP08581 1390 aa18.77■□□□□ 0.6
SRRM1-216ENST00000489130 FOXD1Q16676 465 aa18.76■□□□□ 0.59
SRRM1-216ENST00000489130 SLAIN2Q9P270 581 aa18.76■□□□□ 0.59
SRRM1-216ENST00000489130 RPGRIP1LQ68CZ1 1315 aa18.75■□□□□ 0.59
SRRM1-216ENST00000489130 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
SRRM1-216ENST00000489130 MPHOSPH9Q99550 1183 aa18.75■□□□□ 0.59
SRRM1-216ENST00000489130 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
SRRM1-216ENST00000489130 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
SRRM1-216ENST00000489130 C19orf44Q9H6X5 657 aa18.74■□□□□ 0.59
SRRM1-216ENST00000489130 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
SRRM1-216ENST00000489130 C14orf37Q86TY3 774 aa18.73■□□□□ 0.59
SRRM1-216ENST00000489130 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.73■□□□□ 0.59
SRRM1-216ENST00000489130 CADPS2Q86UW7 1296 aa18.72■□□□□ 0.59
SRRM1-216ENST00000489130 DCCP43146 1447 aa18.72■□□□□ 0.59
SRRM1-216ENST00000489130 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
SRRM1-216ENST00000489130 PPLO60437 1756 aa18.7■□□□□ 0.58
SRRM1-216ENST00000489130 SPATA31E1Q6ZUB1 1445 aa18.7■□□□□ 0.58
SRRM1-216ENST00000489130 ATF3P18847 181 aa18.69■□□□□ 0.58
SRRM1-216ENST00000489130 RAB3GAP2Q9H2M9 1393 aa18.68■□□□□ 0.58
SRRM1-216ENST00000489130 PTCH1Q13635 1447 aa18.67■□□□□ 0.58
SRRM1-216ENST00000489130 PRAG1Q86YV5 1406 aa18.67■□□□□ 0.58
SRRM1-216ENST00000489130 SOCS7O14512 581 aa18.67■□□□□ 0.58
SRRM1-216ENST00000489130 PHLPP1O60346 1717 aa18.66■□□□□ 0.58
SRRM1-216ENST00000489130 ADGRL3Q9HAR2 1447 aa18.66■□□□□ 0.58
SRRM1-216ENST00000489130 COL16A1Q07092 1604 aaPredicted RBP18.64■□□□□ 0.57
SRRM1-216ENST00000489130 AHDC1Q5TGY3 1603 aaPredicted RBP18.64■□□□□ 0.57
SRRM1-216ENST00000489130 ANKRD30BQ9BXX2 1392 aa18.64■□□□□ 0.57
SRRM1-216ENST00000489130 IFT172Q9UG01 1749 aa18.63■□□□□ 0.57
SRRM1-216ENST00000489130 MST1RQ04912 1400 aa18.63■□□□□ 0.57
SRRM1-216ENST00000489130 NALCNQ8IZF0 1738 aa18.63■□□□□ 0.57
SRRM1-216ENST00000489130 RGL3Q3MIN7 710 aa18.62■□□□□ 0.57
SRRM1-216ENST00000489130 ROBO2Q9HCK4 1378 aa18.62■□□□□ 0.57
SRRM1-216ENST00000489130 JCADQ9P266 1359 aa18.61■□□□□ 0.57
SRRM1-216ENST00000489130 ADGRF5Q8IZF2 1346 aa18.61■□□□□ 0.57
SRRM1-216ENST00000489130 BRINP3Q76B58 766 aa18.61■□□□□ 0.57
SRRM1-216ENST00000489130 ASXL1Q8IXJ9 1541 aa18.59■□□□□ 0.57
SRRM1-216ENST00000489130 PIK3C2GO75747 1445 aa18.59■□□□□ 0.57
SRRM1-216ENST00000489130 HRCP23327 699 aa18.57■□□□□ 0.56
SRRM1-216ENST00000489130 RGS17Q9UGC6 210 aaPredicted RBP18.57■□□□□ 0.56
SRRM1-216ENST00000489130 TECPR2O15040 1411 aa18.56■□□□□ 0.56
SRRM1-216ENST00000489130 NRXN1Q9ULB1 1477 aa18.55■□□□□ 0.56
SRRM1-216ENST00000489130 MYOM2P54296 1465 aa18.54■□□□□ 0.56
SRRM1-216ENST00000489130 NHSL1Q5SYE7 1610 aa18.54■□□□□ 0.56
SRRM1-216ENST00000489130 SPATA31A6Q5VVP1 1343 aa18.53■□□□□ 0.56
SRRM1-216ENST00000489130 SHPRHQ149N8 1683 aa18.53■□□□□ 0.56
SRRM1-216ENST00000489130 LRPPRCP42704 1394 aaKnown RBP18.53■□□□□ 0.56
SRRM1-216ENST00000489130 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
SRRM1-216ENST00000489130 ABCC11Q96J66 1382 aa18.52■□□□□ 0.55
SRRM1-216ENST00000489130 KNDC1Q76NI1 1749 aa18.51■□□□□ 0.55
SRRM1-216ENST00000489130 LRP6O75581 1613 aa18.5■□□□□ 0.55
SRRM1-216ENST00000489130 CDC42BPGQ6DT37 1551 aa18.5■□□□□ 0.55
SRRM1-216ENST00000489130 C14orf93Q9H972 538 aaKnown RBP18.49■□□□□ 0.55
SRRM1-216ENST00000489130 LAMC1P11047 1609 aa18.49■□□□□ 0.55
SRRM1-216ENST00000489130 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
SRRM1-216ENST00000489130 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
SRRM1-216ENST00000489130 STK26Q9P289 416 aa18.47■□□□□ 0.55
SRRM1-216ENST00000489130 LRRC59Q96AG4 307 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms