RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PLEKHG1Q9ULL1 1385 aa21.29■■□□□ 1
COL9A2-208ENST00000488463 ILDR2Q71H61 639 aa21.29■■□□□ 1
COL9A2-208ENST00000488463 CHGAP10645 457 aaKnown RBP21.28■■□□□ 1
COL9A2-208ENST00000488463 LRRC7Q96NW7 1537 aa21.27■■□□□ 1
COL9A2-208ENST00000488463 RAB3GAP2Q9H2M9 1393 aa21.26■□□□□ 0.99
COL9A2-208ENST00000488463 DISP3Q9P2K9 1392 aa21.25■□□□□ 0.99
COL9A2-208ENST00000488463 KIF1BO60333 1816 aa21.25■□□□□ 0.99
COL9A2-208ENST00000488463 SLC26A8Q96RN1 970 aa21.25■□□□□ 0.99
COL9A2-208ENST00000488463 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
COL9A2-208ENST00000488463 XIRP1Q702N8 1843 aaKnown RBP21.25■□□□□ 0.99
COL9A2-208ENST00000488463 ADAMTS13Q76LX8 1427 aa21.24■□□□□ 0.99
COL9A2-208ENST00000488463 FOXD1Q16676 465 aa21.24■□□□□ 0.99
COL9A2-208ENST00000488463 ALKQ9UM73 1620 aa21.24■□□□□ 0.99
COL9A2-208ENST00000488463 NWD1Q149M9 1564 aa21.23■□□□□ 0.99
COL9A2-208ENST00000488463 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.23■□□□□ 0.99
COL9A2-208ENST00000488463 NEXMIFQ5QGS0 1516 aa21.23■□□□□ 0.99
COL9A2-208ENST00000488463 HDGFP51858 240 aaKnown RBP21.22■□□□□ 0.99
COL9A2-208ENST00000488463 NUTM2DQ5VT03 806 aaPredicted RBP21.22■□□□□ 0.99
COL9A2-208ENST00000488463 CHD2O14647 1828 aaKnown RBP21.22■□□□□ 0.99
COL9A2-208ENST00000488463 NRXN3Q9Y4C0 1643 aa21.22■□□□□ 0.99
COL9A2-208ENST00000488463 UBAP1LF5GYI3 381 aa21.21■□□□□ 0.99
COL9A2-208ENST00000488463 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
COL9A2-208ENST00000488463 PPP1R15AO75807 674 aaPredicted RBP21.19■□□□□ 0.98
COL9A2-208ENST00000488463 KCNA6P17658 529 aa21.19■□□□□ 0.98
COL9A2-208ENST00000488463 DIP2AQ14689 1571 aa21.19■□□□□ 0.98
COL9A2-208ENST00000488463 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
COL9A2-208ENST00000488463 SENP3Q9H4L4 574 aaPredicted RBP21.18■□□□□ 0.98
COL9A2-208ENST00000488463 TBX22Q9Y458 520 aa21.18■□□□□ 0.98
COL9A2-208ENST00000488463 HRCP23327 699 aa21.16■□□□□ 0.98
COL9A2-208ENST00000488463 NKTRP30414 1462 aaKnown RBP21.15■□□□□ 0.98
COL9A2-208ENST00000488463 SPATA31E1Q6ZUB1 1445 aa21.14■□□□□ 0.98
COL9A2-208ENST00000488463 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
COL9A2-208ENST00000488463 PPLO60437 1756 aa21.13■□□□□ 0.97
COL9A2-208ENST00000488463 BCANQ96GW7 911 aa21.13■□□□□ 0.97
COL9A2-208ENST00000488463 CCDC144AA2RUR9 1427 aa21.12■□□□□ 0.97
COL9A2-208ENST00000488463 PIK3R4Q99570 1358 aa21.12■□□□□ 0.97
COL9A2-208ENST00000488463 TMEM94Q12767 1356 aa21.11■□□□□ 0.97
COL9A2-208ENST00000488463 SOCS7O14512 581 aa21.11■□□□□ 0.97
COL9A2-208ENST00000488463 PTPRUQ92729 1446 aa21.11■□□□□ 0.97
COL9A2-208ENST00000488463 SETD1AO15047 1707 aaKnown RBP21.09■□□□□ 0.97
COL9A2-208ENST00000488463 IFT172Q9UG01 1749 aa21.09■□□□□ 0.97
COL9A2-208ENST00000488463 RPGRIP1LQ68CZ1 1315 aa21.09■□□□□ 0.97
COL9A2-208ENST00000488463 XRN1Q8IZH2 1706 aaKnown RBP21.08■□□□□ 0.97
COL9A2-208ENST00000488463 TOM1O60784 492 aa21.07■□□□□ 0.96
COL9A2-208ENST00000488463 METP08581 1390 aa21.07■□□□□ 0.96
COL9A2-208ENST00000488463 PROSER2Q86WR7 435 aaPredicted RBP21.06■□□□□ 0.96
COL9A2-208ENST00000488463 RBM33Q96EV2 1170 aaKnown RBP21.06■□□□□ 0.96
COL9A2-208ENST00000488463 ANKRD30BQ9BXX2 1392 aa21.06■□□□□ 0.96
COL9A2-208ENST00000488463 VGFO15240 615 aaPredicted RBP21.04■□□□□ 0.96
COL9A2-208ENST00000488463 HSPA1LP34931 641 aa21.04■□□□□ 0.96
COL9A2-208ENST00000488463 AMOTL2Q9Y2J4 779 aa21.02■□□□□ 0.96
COL9A2-208ENST00000488463 PIP4K2BP78356 416 aa21.01■□□□□ 0.95
COL9A2-208ENST00000488463 NCOA3Q9Y6Q9 1424 aa21.01■□□□□ 0.95
COL9A2-208ENST00000488463 RGL3Q3MIN7 710 aa21■□□□□ 0.95
COL9A2-208ENST00000488463 ADGRF5Q8IZF2 1346 aa21■□□□□ 0.95
COL9A2-208ENST00000488463 PRAG1Q86YV5 1406 aa20.97■□□□□ 0.95
COL9A2-208ENST00000488463 SCAF1Q9H7N4 1312 aaKnown RBP20.96■□□□□ 0.95
COL9A2-208ENST00000488463 PIK3C2GO75747 1445 aa20.95■□□□□ 0.95
COL9A2-208ENST00000488463 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.95■□□□□ 0.94
COL9A2-208ENST00000488463 NRXN1Q9ULB1 1477 aa20.95■□□□□ 0.94
COL9A2-208ENST00000488463 MSH6P52701 1360 aa20.95■□□□□ 0.94
COL9A2-208ENST00000488463 FAM135BQ49AJ0 1406 aa20.94■□□□□ 0.94
COL9A2-208ENST00000488463 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
COL9A2-208ENST00000488463 MYOM2P54296 1465 aa20.93■□□□□ 0.94
COL9A2-208ENST00000488463 PTCH1Q13635 1447 aa20.92■□□□□ 0.94
COL9A2-208ENST00000488463 ROBO1Q9Y6N7 1651 aa20.91■□□□□ 0.94
COL9A2-208ENST00000488463 ROBO2Q9HCK4 1378 aa20.9■□□□□ 0.94
COL9A2-208ENST00000488463 C19orf44Q9H6X5 657 aa20.9■□□□□ 0.94
COL9A2-208ENST00000488463 NALCNQ8IZF0 1738 aa20.89■□□□□ 0.93
COL9A2-208ENST00000488463 DCCP43146 1447 aa20.87■□□□□ 0.93
COL9A2-208ENST00000488463 SLAIN2Q9P270 581 aa20.87■□□□□ 0.93
COL9A2-208ENST00000488463 ADGRL3Q9HAR2 1447 aa20.87■□□□□ 0.93
COL9A2-208ENST00000488463 DHX57Q6P158 1386 aaKnown RBP20.86■□□□□ 0.93
COL9A2-208ENST00000488463 TECPR2O15040 1411 aa20.86■□□□□ 0.93
COL9A2-208ENST00000488463 C14orf93Q9H972 538 aaKnown RBP20.85■□□□□ 0.93
COL9A2-208ENST00000488463 KNDC1Q76NI1 1749 aa20.84■□□□□ 0.93
COL9A2-208ENST00000488463 LAMC1P11047 1609 aa20.83■□□□□ 0.93
COL9A2-208ENST00000488463 C14orf37Q86TY3 774 aa20.83■□□□□ 0.93
COL9A2-208ENST00000488463 CADPS2Q86UW7 1296 aa20.83■□□□□ 0.93
COL9A2-208ENST00000488463 MED1Q15648 1581 aaPredicted RBP20.83■□□□□ 0.92
COL9A2-208ENST00000488463 LRPPRCP42704 1394 aaKnown RBP20.83■□□□□ 0.92
COL9A2-208ENST00000488463 TMEM132EQ6IEE7 984 aa20.82■□□□□ 0.92
COL9A2-208ENST00000488463 ABCC11Q96J66 1382 aa20.82■□□□□ 0.92
COL9A2-208ENST00000488463 MST1RQ04912 1400 aa20.81■□□□□ 0.92
COL9A2-208ENST00000488463 ATF3P18847 181 aa20.8■□□□□ 0.92
COL9A2-208ENST00000488463 CFAP70Q5T0N1 1121 aa20.8■□□□□ 0.92
COL9A2-208ENST00000488463 YTHDC2Q9H6S0 1430 aaKnown RBP20.79■□□□□ 0.92
COL9A2-208ENST00000488463 TRIM26Q12899 539 aaPredicted RBP20.79■□□□□ 0.92
COL9A2-208ENST00000488463 ADGRB1O14514 1584 aa20.79■□□□□ 0.92
COL9A2-208ENST00000488463 DCAF11Q8TEB1 546 aa20.77■□□□□ 0.92
COL9A2-208ENST00000488463 COL16A1Q07092 1604 aaPredicted RBP20.76■□□□□ 0.91
COL9A2-208ENST00000488463 AHDC1Q5TGY3 1603 aaPredicted RBP20.76■□□□□ 0.91
COL9A2-208ENST00000488463 STAC3Q96MF2 364 aa20.76■□□□□ 0.91
COL9A2-208ENST00000488463 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
COL9A2-208ENST00000488463 PLEKHH1Q9ULM0 1364 aa20.75■□□□□ 0.91
COL9A2-208ENST00000488463 BRINP3Q76B58 766 aa20.75■□□□□ 0.91
COL9A2-208ENST00000488463 STK26Q9P289 416 aa20.75■□□□□ 0.91
COL9A2-208ENST00000488463 WAPLQ7Z5K2 1190 aa20.74■□□□□ 0.91
COL9A2-208ENST00000488463 KDM2AQ9Y2K7 1162 aa20.74■□□□□ 0.91
COL9A2-208ENST00000488463 CDC42BPGQ6DT37 1551 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms