RNA–Protein interactions for RNA: ENST00000488449.1

TMCO4-204, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 3

Gene TMCO4, Length 647 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-204ENST00000488449 XIRP1Q702N8 1843 aaKnown RBP24.81■■□□□ 1.56
TMCO4-204ENST00000488449 DIP2AQ14689 1571 aa24.8■■□□□ 1.56
TMCO4-204ENST00000488449 ALKQ9UM73 1620 aa24.79■■□□□ 1.56
TMCO4-204ENST00000488449 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
TMCO4-204ENST00000488449 CHD2O14647 1828 aaKnown RBP24.77■■□□□ 1.56
TMCO4-204ENST00000488449 KIF1BO60333 1816 aa24.77■■□□□ 1.56
TMCO4-204ENST00000488449 NKTRP30414 1462 aaKnown RBP24.77■■□□□ 1.56
TMCO4-204ENST00000488449 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.76■■□□□ 1.55
TMCO4-204ENST00000488449 ACIN1Q9UKV3 1341 aaKnown RBP24.75■■□□□ 1.55
TMCO4-204ENST00000488449 UBAP1LF5GYI3 381 aa24.72■■□□□ 1.55
TMCO4-204ENST00000488449 SETBP1Q9Y6X0 1596 aa24.71■■□□□ 1.55
TMCO4-204ENST00000488449 ADAMTS13Q76LX8 1427 aa24.71■■□□□ 1.55
TMCO4-204ENST00000488449 KCNA6P17658 529 aa24.7■■□□□ 1.54
TMCO4-204ENST00000488449 NRXN3Q9Y4C0 1643 aa24.7■■□□□ 1.54
TMCO4-204ENST00000488449 NEXMIFQ5QGS0 1516 aa24.7■■□□□ 1.54
TMCO4-204ENST00000488449 PIK3R4Q99570 1358 aa24.68■■□□□ 1.54
TMCO4-204ENST00000488449 TOM1O60784 492 aa24.67■■□□□ 1.54
TMCO4-204ENST00000488449 TRIM52Q96A61 297 aa24.67■■□□□ 1.54
TMCO4-204ENST00000488449 SLC26A8Q96RN1 970 aa24.67■■□□□ 1.54
TMCO4-204ENST00000488449 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
TMCO4-204ENST00000488449 TBX22Q9Y458 520 aa24.67■■□□□ 1.54
TMCO4-204ENST00000488449 PPP1R15AO75807 674 aaPredicted RBP24.66■■□□□ 1.54
TMCO4-204ENST00000488449 SETD5Q9C0A6 1442 aa24.66■■□□□ 1.54
TMCO4-204ENST00000488449 CHGAP10645 457 aaKnown RBP24.65■■□□□ 1.54
TMCO4-204ENST00000488449 TMEM94Q12767 1356 aa24.61■■□□□ 1.53
TMCO4-204ENST00000488449 PPLO60437 1756 aa24.61■■□□□ 1.53
TMCO4-204ENST00000488449 XRN1Q8IZH2 1706 aaKnown RBP24.61■■□□□ 1.53
TMCO4-204ENST00000488449 NCOA3Q9Y6Q9 1424 aa24.6■■□□□ 1.53
TMCO4-204ENST00000488449 SETD1AO15047 1707 aaKnown RBP24.58■■□□□ 1.52
TMCO4-204ENST00000488449 MPHOSPH9Q99550 1183 aa24.57■■□□□ 1.52
TMCO4-204ENST00000488449 RAB3GAP2Q9H2M9 1393 aa24.55■■□□□ 1.52
TMCO4-204ENST00000488449 IFT172Q9UG01 1749 aa24.55■■□□□ 1.52
TMCO4-204ENST00000488449 RPGRIP1LQ68CZ1 1315 aa24.55■■□□□ 1.52
TMCO4-204ENST00000488449 CCDC144AA2RUR9 1427 aa24.54■■□□□ 1.52
TMCO4-204ENST00000488449 SPATA31E1Q6ZUB1 1445 aa24.54■■□□□ 1.52
TMCO4-204ENST00000488449 BCANQ96GW7 911 aa24.54■■□□□ 1.52
TMCO4-204ENST00000488449 PTPRUQ92729 1446 aa24.52■■□□□ 1.52
TMCO4-204ENST00000488449 ZNF326Q5BKZ1 582 aaKnown RBP24.52■■□□□ 1.52
TMCO4-204ENST00000488449 NUTM2DQ5VT03 806 aaPredicted RBP24.52■■□□□ 1.52
TMCO4-204ENST00000488449 PRAG1Q86YV5 1406 aa24.52■■□□□ 1.52
TMCO4-204ENST00000488449 HRCP23327 699 aa24.51■■□□□ 1.51
TMCO4-204ENST00000488449 PROSER2Q86WR7 435 aaPredicted RBP24.51■■□□□ 1.51
TMCO4-204ENST00000488449 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
TMCO4-204ENST00000488449 PIP4K2BP78356 416 aa24.48■■□□□ 1.51
TMCO4-204ENST00000488449 MSH6P52701 1360 aa24.47■■□□□ 1.51
TMCO4-204ENST00000488449 VGFO15240 615 aaPredicted RBP24.47■■□□□ 1.51
TMCO4-204ENST00000488449 FOXD1Q16676 465 aa24.47■■□□□ 1.51
TMCO4-204ENST00000488449 HSPA1LP34931 641 aa24.46■■□□□ 1.51
TMCO4-204ENST00000488449 METP08581 1390 aa24.45■■□□□ 1.5
TMCO4-204ENST00000488449 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.45■■□□□ 1.5
TMCO4-204ENST00000488449 ROBO1Q9Y6N7 1651 aa24.44■■□□□ 1.5
TMCO4-204ENST00000488449 DCCP43146 1447 aa24.44■■□□□ 1.5
TMCO4-204ENST00000488449 SCAF1Q9H7N4 1312 aaKnown RBP24.43■■□□□ 1.5
TMCO4-204ENST00000488449 ANKRD30BQ9BXX2 1392 aa24.42■■□□□ 1.5
TMCO4-204ENST00000488449 AMOTL2Q9Y2J4 779 aa24.42■■□□□ 1.5
TMCO4-204ENST00000488449 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
TMCO4-204ENST00000488449 PTCH1Q13635 1447 aa24.41■■□□□ 1.5
TMCO4-204ENST00000488449 RBM33Q96EV2 1170 aaKnown RBP24.37■■□□□ 1.49
TMCO4-204ENST00000488449 NRXN1Q9ULB1 1477 aa24.37■■□□□ 1.49
TMCO4-204ENST00000488449 NALCNQ8IZF0 1738 aa24.36■■□□□ 1.49
TMCO4-204ENST00000488449 C19orf44Q9H6X5 657 aa24.36■■□□□ 1.49
TMCO4-204ENST00000488449 MYOM2P54296 1465 aa24.36■■□□□ 1.49
TMCO4-204ENST00000488449 PIK3C2GO75747 1445 aa24.35■■□□□ 1.49
TMCO4-204ENST00000488449 MED1Q15648 1581 aaPredicted RBP24.35■■□□□ 1.49
TMCO4-204ENST00000488449 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
TMCO4-204ENST00000488449 LAMC1P11047 1609 aa24.34■■□□□ 1.49
TMCO4-204ENST00000488449 KNDC1Q76NI1 1749 aa24.33■■□□□ 1.49
TMCO4-204ENST00000488449 SLAIN2Q9P270 581 aa24.33■■□□□ 1.49
TMCO4-204ENST00000488449 CADPS2Q86UW7 1296 aa24.32■■□□□ 1.48
TMCO4-204ENST00000488449 TECPR2O15040 1411 aa24.32■■□□□ 1.48
TMCO4-204ENST00000488449 ASXL1Q8IXJ9 1541 aa24.31■■□□□ 1.48
TMCO4-204ENST00000488449 DISP3Q9P2K9 1392 aa24.3■■□□□ 1.48
TMCO4-204ENST00000488449 AHDC1Q5TGY3 1603 aaPredicted RBP24.3■■□□□ 1.48
TMCO4-204ENST00000488449 ADGRF5Q8IZF2 1346 aa24.3■■□□□ 1.48
TMCO4-204ENST00000488449 PHLPP1O60346 1717 aa24.28■■□□□ 1.48
TMCO4-204ENST00000488449 COL16A1Q07092 1604 aaPredicted RBP24.28■■□□□ 1.48
TMCO4-204ENST00000488449 ROBO2Q9HCK4 1378 aa24.27■■□□□ 1.48
TMCO4-204ENST00000488449 RGL3Q3MIN7 710 aa24.26■■□□□ 1.47
TMCO4-204ENST00000488449 MST1RQ04912 1400 aa24.26■■□□□ 1.47
TMCO4-204ENST00000488449 ATF3P18847 181 aa24.25■■□□□ 1.47
TMCO4-204ENST00000488449 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
TMCO4-204ENST00000488449 LRPPRCP42704 1394 aaKnown RBP24.23■■□□□ 1.47
TMCO4-204ENST00000488449 CDC42BPGQ6DT37 1551 aa24.23■■□□□ 1.47
TMCO4-204ENST00000488449 NHSL1Q5SYE7 1610 aa24.23■■□□□ 1.47
TMCO4-204ENST00000488449 ABCC11Q96J66 1382 aa24.22■■□□□ 1.47
TMCO4-204ENST00000488449 STAC3Q96MF2 364 aa24.19■■□□□ 1.46
TMCO4-204ENST00000488449 C14orf93Q9H972 538 aaKnown RBP24.18■■□□□ 1.46
TMCO4-204ENST00000488449 SHPRHQ149N8 1683 aa24.18■■□□□ 1.46
TMCO4-204ENST00000488449 YTHDC2Q9H6S0 1430 aaKnown RBP24.17■■□□□ 1.46
TMCO4-204ENST00000488449 BRINP3Q76B58 766 aa24.16■■□□□ 1.46
TMCO4-204ENST00000488449 ADGRB1O14514 1584 aa24.16■■□□□ 1.46
TMCO4-204ENST00000488449 DLC1Q96QB1 1528 aa24.14■■□□□ 1.45
TMCO4-204ENST00000488449 JCADQ9P266 1359 aa24.14■■□□□ 1.45
TMCO4-204ENST00000488449 C1orf167Q5SNV9 1468 aa24.13■■□□□ 1.45
TMCO4-204ENST00000488449 SIRT1Q96EB6 747 aa24.13■■□□□ 1.45
TMCO4-204ENST00000488449 DHX57Q6P158 1386 aaKnown RBP24.11■■□□□ 1.45
TMCO4-204ENST00000488449 ILDR2Q71H61 639 aa24.09■■□□□ 1.45
TMCO4-204ENST00000488449 FMN2Q9NZ56 1722 aa24.09■■□□□ 1.45
TMCO4-204ENST00000488449 KIAA1210Q9ULL0 1709 aa24.09■■□□□ 1.45
TMCO4-204ENST00000488449 TMEM132EQ6IEE7 984 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms