RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 CPS1P31327 1500 aa23.82■■□□□ 1.4
ERGIC3-216ENST00000488384 FOXD1Q16676 465 aa23.81■■□□□ 1.4
ERGIC3-216ENST00000488384 RIMS2Q9UQ26 1411 aa23.81■■□□□ 1.4
ERGIC3-216ENST00000488384 ALKQ9UM73 1620 aa23.81■■□□□ 1.4
ERGIC3-216ENST00000488384 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
ERGIC3-216ENST00000488384 EID1Q9Y6B2 187 aa23.8■■□□□ 1.4
ERGIC3-216ENST00000488384 KIF1BO60333 1816 aa23.77■■□□□ 1.4
ERGIC3-216ENST00000488384 HRCP23327 699 aa23.76■■□□□ 1.39
ERGIC3-216ENST00000488384 XIRP1Q702N8 1843 aaKnown RBP23.73■■□□□ 1.39
ERGIC3-216ENST00000488384 PLEKHG1Q9ULL1 1385 aa23.72■■□□□ 1.39
ERGIC3-216ENST00000488384 NEXMIFQ5QGS0 1516 aa23.72■■□□□ 1.39
ERGIC3-216ENST00000488384 CCDC144AA2RUR9 1427 aa23.71■■□□□ 1.39
ERGIC3-216ENST00000488384 PPP1R15AO75807 674 aaPredicted RBP23.68■■□□□ 1.38
ERGIC3-216ENST00000488384 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.68■■□□□ 1.38
ERGIC3-216ENST00000488384 LRRC7Q96NW7 1537 aa23.68■■□□□ 1.38
ERGIC3-216ENST00000488384 HDGFP51858 240 aaKnown RBP23.67■■□□□ 1.38
ERGIC3-216ENST00000488384 NUTM2DQ5VT03 806 aaPredicted RBP23.67■■□□□ 1.38
ERGIC3-216ENST00000488384 UBAP1LF5GYI3 381 aa23.66■■□□□ 1.38
ERGIC3-216ENST00000488384 ZNF326Q5BKZ1 582 aaKnown RBP23.66■■□□□ 1.38
ERGIC3-216ENST00000488384 SPATA31E1Q6ZUB1 1445 aa23.65■■□□□ 1.38
ERGIC3-216ENST00000488384 NRXN3Q9Y4C0 1643 aa23.64■■□□□ 1.38
ERGIC3-216ENST00000488384 SLC26A8Q96RN1 970 aa23.64■■□□□ 1.37
ERGIC3-216ENST00000488384 ADAMTS13Q76LX8 1427 aa23.64■■□□□ 1.37
ERGIC3-216ENST00000488384 TRIM26Q12899 539 aaPredicted RBP23.63■■□□□ 1.37
ERGIC3-216ENST00000488384 DIP2AQ14689 1571 aa23.63■■□□□ 1.37
ERGIC3-216ENST00000488384 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
ERGIC3-216ENST00000488384 SETBP1Q9Y6X0 1596 aa23.63■■□□□ 1.37
ERGIC3-216ENST00000488384 PPLO60437 1756 aa23.63■■□□□ 1.37
ERGIC3-216ENST00000488384 NWD1Q149M9 1564 aa23.62■■□□□ 1.37
ERGIC3-216ENST00000488384 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
ERGIC3-216ENST00000488384 BCANQ96GW7 911 aa23.6■■□□□ 1.37
ERGIC3-216ENST00000488384 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
ERGIC3-216ENST00000488384 RPGRIP1LQ68CZ1 1315 aa23.57■■□□□ 1.36
ERGIC3-216ENST00000488384 CHD2O14647 1828 aaKnown RBP23.55■■□□□ 1.36
ERGIC3-216ENST00000488384 TBX22Q9Y458 520 aa23.55■■□□□ 1.36
ERGIC3-216ENST00000488384 DISP3Q9P2K9 1392 aa23.54■■□□□ 1.36
ERGIC3-216ENST00000488384 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
ERGIC3-216ENST00000488384 KCNA6P17658 529 aa23.52■■□□□ 1.36
ERGIC3-216ENST00000488384 SETD1AO15047 1707 aaKnown RBP23.52■■□□□ 1.36
ERGIC3-216ENST00000488384 RGL3Q3MIN7 710 aa23.51■■□□□ 1.35
ERGIC3-216ENST00000488384 ILDR2Q71H61 639 aa23.51■■□□□ 1.35
ERGIC3-216ENST00000488384 PIK3R4Q99570 1358 aa23.51■■□□□ 1.35
ERGIC3-216ENST00000488384 VGFO15240 615 aaPredicted RBP23.5■■□□□ 1.35
ERGIC3-216ENST00000488384 HSPA1LP34931 641 aa23.49■■□□□ 1.35
ERGIC3-216ENST00000488384 XRN1Q8IZH2 1706 aaKnown RBP23.48■■□□□ 1.35
ERGIC3-216ENST00000488384 PTPRUQ92729 1446 aa23.48■■□□□ 1.35
ERGIC3-216ENST00000488384 TOM1O60784 492 aa23.47■■□□□ 1.35
ERGIC3-216ENST00000488384 PIP4K2BP78356 416 aa23.47■■□□□ 1.35
ERGIC3-216ENST00000488384 MED1Q15648 1581 aaPredicted RBP23.47■■□□□ 1.35
ERGIC3-216ENST00000488384 METP08581 1390 aa23.46■■□□□ 1.35
ERGIC3-216ENST00000488384 MYOM2P54296 1465 aa23.46■■□□□ 1.35
ERGIC3-216ENST00000488384 ADGRF5Q8IZF2 1346 aa23.46■■□□□ 1.35
ERGIC3-216ENST00000488384 PIK3C2GO75747 1445 aa23.44■■□□□ 1.34
ERGIC3-216ENST00000488384 TMEM94Q12767 1356 aa23.44■■□□□ 1.34
ERGIC3-216ENST00000488384 NRXN1Q9ULB1 1477 aa23.43■■□□□ 1.34
ERGIC3-216ENST00000488384 DHX57Q6P158 1386 aaKnown RBP23.43■■□□□ 1.34
ERGIC3-216ENST00000488384 SCAF1Q9H7N4 1312 aaKnown RBP23.41■■□□□ 1.34
ERGIC3-216ENST00000488384 PROSER2Q86WR7 435 aaPredicted RBP23.4■■□□□ 1.34
ERGIC3-216ENST00000488384 ASXL1Q8IXJ9 1541 aa23.38■■□□□ 1.33
ERGIC3-216ENST00000488384 RBM33Q96EV2 1170 aaKnown RBP23.38■■□□□ 1.33
ERGIC3-216ENST00000488384 AMOTL2Q9Y2J4 779 aa23.38■■□□□ 1.33
ERGIC3-216ENST00000488384 PRAG1Q86YV5 1406 aa23.36■■□□□ 1.33
ERGIC3-216ENST00000488384 LAMC1P11047 1609 aa23.36■■□□□ 1.33
ERGIC3-216ENST00000488384 ROBO1Q9Y6N7 1651 aa23.34■■□□□ 1.33
ERGIC3-216ENST00000488384 PTCH1Q13635 1447 aa23.33■■□□□ 1.33
ERGIC3-216ENST00000488384 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.33
ERGIC3-216ENST00000488384 MSH6P52701 1360 aa23.3■■□□□ 1.32
ERGIC3-216ENST00000488384 DCAF11Q8TEB1 546 aa23.3■■□□□ 1.32
ERGIC3-216ENST00000488384 KNDC1Q76NI1 1749 aa23.29■■□□□ 1.32
ERGIC3-216ENST00000488384 ROBO2Q9HCK4 1378 aa23.28■■□□□ 1.32
ERGIC3-216ENST00000488384 TECPR2O15040 1411 aa23.28■■□□□ 1.32
ERGIC3-216ENST00000488384 FAM135BQ49AJ0 1406 aa23.28■■□□□ 1.32
ERGIC3-216ENST00000488384 C14orf93Q9H972 538 aaKnown RBP23.28■■□□□ 1.32
ERGIC3-216ENST00000488384 NALCNQ8IZF0 1738 aa23.28■■□□□ 1.32
ERGIC3-216ENST00000488384 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
ERGIC3-216ENST00000488384 SIN3AQ96ST3 1273 aa23.27■■□□□ 1.32
ERGIC3-216ENST00000488384 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.32
ERGIC3-216ENST00000488384 KDM2AQ9Y2K7 1162 aa23.27■■□□□ 1.32
ERGIC3-216ENST00000488384 LRPPRCP42704 1394 aaKnown RBP23.27■■□□□ 1.31
ERGIC3-216ENST00000488384 CFAP70Q5T0N1 1121 aa23.26■■□□□ 1.31
ERGIC3-216ENST00000488384 ADGRB1O14514 1584 aa23.26■■□□□ 1.31
ERGIC3-216ENST00000488384 STAC3Q96MF2 364 aa23.25■■□□□ 1.31
ERGIC3-216ENST00000488384 YTHDC2Q9H6S0 1430 aaKnown RBP23.25■■□□□ 1.31
ERGIC3-216ENST00000488384 ADGRL3Q9HAR2 1447 aa23.25■■□□□ 1.31
ERGIC3-216ENST00000488384 TMEM132EQ6IEE7 984 aa23.24■■□□□ 1.31
ERGIC3-216ENST00000488384 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
ERGIC3-216ENST00000488384 SOCS7O14512 581 aa23.23■■□□□ 1.31
ERGIC3-216ENST00000488384 DCCP43146 1447 aa23.23■■□□□ 1.31
ERGIC3-216ENST00000488384 ABCC11Q96J66 1382 aa23.22■■□□□ 1.31
ERGIC3-216ENST00000488384 C19orf44Q9H6X5 657 aa23.21■■□□□ 1.31
ERGIC3-216ENST00000488384 NEUROD1Q13562 356 aa23.19■■□□□ 1.3
ERGIC3-216ENST00000488384 STK26Q9P289 416 aa23.19■■□□□ 1.3
ERGIC3-216ENST00000488384 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
ERGIC3-216ENST00000488384 KIAA1210Q9ULL0 1709 aa23.18■■□□□ 1.3
ERGIC3-216ENST00000488384 COL16A1Q07092 1604 aaPredicted RBP23.18■■□□□ 1.3
ERGIC3-216ENST00000488384 L3MBTL2Q969R5 705 aa23.17■■□□□ 1.3
ERGIC3-216ENST00000488384 CADPS2Q86UW7 1296 aa23.16■■□□□ 1.3
ERGIC3-216ENST00000488384 DLC1Q96QB1 1528 aa23.16■■□□□ 1.3
ERGIC3-216ENST00000488384 PLEKHH1Q9ULM0 1364 aa23.15■■□□□ 1.3
ERGIC3-216ENST00000488384 ATF3P18847 181 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms