RNA–Protein interactions for RNA: ENST00000488311.1

PLD3-213, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 750 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-213ENST00000488311 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
PLD3-213ENST00000488311 CHGAP10645 457 aaKnown RBP18.69■□□□□ 0.58
PLD3-213ENST00000488311 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
PLD3-213ENST00000488311 SPHKAPQ2M3C7 1700 aa18.69■□□□□ 0.58
PLD3-213ENST00000488311 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
PLD3-213ENST00000488311 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
PLD3-213ENST00000488311 HSPA1LP34931 641 aa18.66■□□□□ 0.58
PLD3-213ENST00000488311 PLEKHG1Q9ULL1 1385 aa18.66■□□□□ 0.58
PLD3-213ENST00000488311 NWD1Q149M9 1564 aa18.65■□□□□ 0.58
PLD3-213ENST00000488311 TOM1O60784 492 aa18.65■□□□□ 0.58
PLD3-213ENST00000488311 CLTCL1P53675 1640 aa18.64■□□□□ 0.57
PLD3-213ENST00000488311 TMEM94Q12767 1356 aa18.63■□□□□ 0.57
PLD3-213ENST00000488311 DISP3Q9P2K9 1392 aa18.63■□□□□ 0.57
PLD3-213ENST00000488311 ADAMTS13Q76LX8 1427 aa18.63■□□□□ 0.57
PLD3-213ENST00000488311 KCNA6P17658 529 aa18.62■□□□□ 0.57
PLD3-213ENST00000488311 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
PLD3-213ENST00000488311 BCANQ96GW7 911 aa18.61■□□□□ 0.57
PLD3-213ENST00000488311 ILDR2Q71H61 639 aa18.6■□□□□ 0.57
PLD3-213ENST00000488311 CHD2O14647 1828 aaKnown RBP18.6■□□□□ 0.57
PLD3-213ENST00000488311 TRPM2O94759 1503 aa18.59■□□□□ 0.57
PLD3-213ENST00000488311 NRXN3Q9Y4C0 1643 aa18.59■□□□□ 0.57
PLD3-213ENST00000488311 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.56
PLD3-213ENST00000488311 TRIM52Q96A61 297 aa18.57■□□□□ 0.56
PLD3-213ENST00000488311 PROSER2Q86WR7 435 aaPredicted RBP18.56■□□□□ 0.56
PLD3-213ENST00000488311 FOXD1Q16676 465 aa18.55■□□□□ 0.56
PLD3-213ENST00000488311 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
PLD3-213ENST00000488311 NEXMIFQ5QGS0 1516 aa18.54■□□□□ 0.56
PLD3-213ENST00000488311 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.54■□□□□ 0.56
PLD3-213ENST00000488311 DIP2AQ14689 1571 aa18.53■□□□□ 0.56
PLD3-213ENST00000488311 TBX22Q9Y458 520 aa18.53■□□□□ 0.56
PLD3-213ENST00000488311 MED1Q15648 1581 aaPredicted RBP18.52■□□□□ 0.56
PLD3-213ENST00000488311 SETBP1Q9Y6X0 1596 aa18.51■□□□□ 0.55
PLD3-213ENST00000488311 HDGFP51858 240 aaKnown RBP18.51■□□□□ 0.55
PLD3-213ENST00000488311 ZNF326Q5BKZ1 582 aaKnown RBP18.51■□□□□ 0.55
PLD3-213ENST00000488311 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
PLD3-213ENST00000488311 KIF1BO60333 1816 aa18.5■□□□□ 0.55
PLD3-213ENST00000488311 ROBO1Q9Y6N7 1651 aa18.49■□□□□ 0.55
PLD3-213ENST00000488311 METP08581 1390 aa18.48■□□□□ 0.55
PLD3-213ENST00000488311 XRN1Q8IZH2 1706 aaKnown RBP18.48■□□□□ 0.55
PLD3-213ENST00000488311 FAM135BQ49AJ0 1406 aa18.47■□□□□ 0.55
PLD3-213ENST00000488311 MSH6P52701 1360 aa18.45■□□□□ 0.54
PLD3-213ENST00000488311 PIK3R4Q99570 1358 aa18.45■□□□□ 0.54
PLD3-213ENST00000488311 AMOTL2Q9Y2J4 779 aa18.45■□□□□ 0.54
PLD3-213ENST00000488311 SETD1AO15047 1707 aaKnown RBP18.44■□□□□ 0.54
PLD3-213ENST00000488311 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.44■□□□□ 0.54
PLD3-213ENST00000488311 MPHOSPH9Q99550 1183 aa18.42■□□□□ 0.54
PLD3-213ENST00000488311 PPLO60437 1756 aa18.42■□□□□ 0.54
PLD3-213ENST00000488311 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
PLD3-213ENST00000488311 SLAIN2Q9P270 581 aa18.39■□□□□ 0.53
PLD3-213ENST00000488311 NCOA3Q9Y6Q9 1424 aa18.39■□□□□ 0.53
PLD3-213ENST00000488311 C14orf37Q86TY3 774 aa18.38■□□□□ 0.53
PLD3-213ENST00000488311 RAB3GAP2Q9H2M9 1393 aa18.38■□□□□ 0.53
PLD3-213ENST00000488311 SPATA31E1Q6ZUB1 1445 aa18.38■□□□□ 0.53
PLD3-213ENST00000488311 PHLPP1O60346 1717 aa18.36■□□□□ 0.53
PLD3-213ENST00000488311 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
PLD3-213ENST00000488311 CCDC144AA2RUR9 1427 aa18.35■□□□□ 0.53
PLD3-213ENST00000488311 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
PLD3-213ENST00000488311 COL16A1Q07092 1604 aaPredicted RBP18.34■□□□□ 0.53
PLD3-213ENST00000488311 ADGRF5Q8IZF2 1346 aa18.34■□□□□ 0.53
PLD3-213ENST00000488311 C19orf44Q9H6X5 657 aa18.34■□□□□ 0.53
PLD3-213ENST00000488311 RGL3Q3MIN7 710 aa18.33■□□□□ 0.52
PLD3-213ENST00000488311 ROBO2Q9HCK4 1378 aa18.32■□□□□ 0.52
PLD3-213ENST00000488311 VGFO15240 615 aaPredicted RBP18.32■□□□□ 0.52
PLD3-213ENST00000488311 RPGRIP1LQ68CZ1 1315 aa18.31■□□□□ 0.52
PLD3-213ENST00000488311 RGS17Q9UGC6 210 aaPredicted RBP18.31■□□□□ 0.52
PLD3-213ENST00000488311 ASXL1Q8IXJ9 1541 aa18.31■□□□□ 0.52
PLD3-213ENST00000488311 MST1RQ04912 1400 aa18.31■□□□□ 0.52
PLD3-213ENST00000488311 SOCS7O14512 581 aa18.3■□□□□ 0.52
PLD3-213ENST00000488311 ATF3P18847 181 aa18.3■□□□□ 0.52
PLD3-213ENST00000488311 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
PLD3-213ENST00000488311 ADGRL3Q9HAR2 1447 aa18.3■□□□□ 0.52
PLD3-213ENST00000488311 BRINP3Q76B58 766 aa18.29■□□□□ 0.52
PLD3-213ENST00000488311 AHDC1Q5TGY3 1603 aaPredicted RBP18.29■□□□□ 0.52
PLD3-213ENST00000488311 DCCP43146 1447 aa18.29■□□□□ 0.52
PLD3-213ENST00000488311 PTCH1Q13635 1447 aa18.29■□□□□ 0.52
PLD3-213ENST00000488311 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
PLD3-213ENST00000488311 PRAG1Q86YV5 1406 aa18.26■□□□□ 0.51
PLD3-213ENST00000488311 PIK3C2GO75747 1445 aa18.25■□□□□ 0.51
PLD3-213ENST00000488311 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
PLD3-213ENST00000488311 LRP6O75581 1613 aa18.24■□□□□ 0.51
PLD3-213ENST00000488311 JCADQ9P266 1359 aa18.23■□□□□ 0.51
PLD3-213ENST00000488311 NHSL1Q5SYE7 1610 aa18.23■□□□□ 0.51
PLD3-213ENST00000488311 ANKRD30BQ9BXX2 1392 aa18.22■□□□□ 0.51
PLD3-213ENST00000488311 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
PLD3-213ENST00000488311 C1orf167Q5SNV9 1468 aa18.21■□□□□ 0.51
PLD3-213ENST00000488311 NRXN1Q9ULB1 1477 aa18.2■□□□□ 0.5
PLD3-213ENST00000488311 PLEKHH1Q9ULM0 1364 aa18.2■□□□□ 0.5
PLD3-213ENST00000488311 STK26Q9P289 416 aa18.2■□□□□ 0.5
PLD3-213ENST00000488311 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
PLD3-213ENST00000488311 POTEAQ6S8J7 498 aa18.19■□□□□ 0.5
PLD3-213ENST00000488311 TECPR2O15040 1411 aa18.18■□□□□ 0.5
PLD3-213ENST00000488311 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
PLD3-213ENST00000488311 MYOM2P54296 1465 aa18.18■□□□□ 0.5
PLD3-213ENST00000488311 KNDC1Q76NI1 1749 aa18.18■□□□□ 0.5
PLD3-213ENST00000488311 LRPPRCP42704 1394 aaKnown RBP18.17■□□□□ 0.5
PLD3-213ENST00000488311 ORAI2Q96SN7 254 aa18.17■□□□□ 0.5
PLD3-213ENST00000488311 CFAP70Q5T0N1 1121 aa18.16■□□□□ 0.5
PLD3-213ENST00000488311 CDC42BPGQ6DT37 1551 aa18.15■□□□□ 0.5
PLD3-213ENST00000488311 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
PLD3-213ENST00000488311 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms