RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 CPS1P31327 1500 aa35.34■■■■□ 3.25
RHBDD3-205ENST00000488106 IQSEC2Q5JU85 1478 aa35.33■■■■□ 3.25
RHBDD3-205ENST00000488106 RAB3GAP2Q9H2M9 1393 aa35.31■■■■□ 3.24
RHBDD3-205ENST00000488106 SENP3Q9H4L4 574 aaPredicted RBP35.28■■■■□ 3.24
RHBDD3-205ENST00000488106 PPP1R15AO75807 674 aaPredicted RBP35.27■■■■□ 3.24
RHBDD3-205ENST00000488106 FOXD1Q16676 465 aa35.26■■■■□ 3.24
RHBDD3-205ENST00000488106 NUTM2DQ5VT03 806 aaPredicted RBP35.23■■■■□ 3.23
RHBDD3-205ENST00000488106 BCANQ96GW7 911 aa35.23■■■■□ 3.23
RHBDD3-205ENST00000488106 MPHOSPH9Q99550 1183 aa35.23■■■■□ 3.23
RHBDD3-205ENST00000488106 PLEKHG1Q9ULL1 1385 aa35.23■■■■□ 3.23
RHBDD3-205ENST00000488106 XIRP1Q702N8 1843 aaKnown RBP35.22■■■■□ 3.23
RHBDD3-205ENST00000488106 CHD2O14647 1828 aaKnown RBP35.2■■■■□ 3.23
RHBDD3-205ENST00000488106 HDGFP51858 240 aaKnown RBP35.2■■■■□ 3.23
RHBDD3-205ENST00000488106 ZNF326Q5BKZ1 582 aaKnown RBP35.19■■■■□ 3.22
RHBDD3-205ENST00000488106 NEXMIFQ5QGS0 1516 aa35.19■■■■□ 3.22
RHBDD3-205ENST00000488106 SLC26A8Q96RN1 970 aa35.19■■■■□ 3.22
RHBDD3-205ENST00000488106 ACIN1Q9UKV3 1341 aaKnown RBP35.18■■■■□ 3.22
RHBDD3-205ENST00000488106 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.18■■■■□ 3.22
RHBDD3-205ENST00000488106 PPLO60437 1756 aa35.18■■■■□ 3.22
RHBDD3-205ENST00000488106 DIP2AQ14689 1571 aa35.15■■■■□ 3.22
RHBDD3-205ENST00000488106 NWD1Q149M9 1564 aa35.15■■■■□ 3.22
RHBDD3-205ENST00000488106 LRRC7Q96NW7 1537 aa35.15■■■■□ 3.22
RHBDD3-205ENST00000488106 NRXN3Q9Y4C0 1643 aa35.14■■■■□ 3.22
RHBDD3-205ENST00000488106 CCDC144AA2RUR9 1427 aa35.12■■■■□ 3.21
RHBDD3-205ENST00000488106 IFT172Q9UG01 1749 aa35.09■■■■□ 3.21
RHBDD3-205ENST00000488106 SETBP1Q9Y6X0 1596 aa35.08■■■■□ 3.21
RHBDD3-205ENST00000488106 ADAMTS13Q76LX8 1427 aa35.07■■■■□ 3.21
RHBDD3-205ENST00000488106 UBAP1LF5GYI3 381 aa35.04■■■■□ 3.2
RHBDD3-205ENST00000488106 NKTRP30414 1462 aaKnown RBP35.03■■■■□ 3.2
RHBDD3-205ENST00000488106 KCNA6P17658 529 aa35■■■■□ 3.19
RHBDD3-205ENST00000488106 SETD1AO15047 1707 aaKnown RBP34.99■■■■□ 3.19
RHBDD3-205ENST00000488106 ALKQ9UM73 1620 aa34.97■■■■□ 3.19
RHBDD3-205ENST00000488106 TBX22Q9Y458 520 aa34.97■■■■□ 3.19
RHBDD3-205ENST00000488106 SPATA31E1Q6ZUB1 1445 aa34.96■■■■□ 3.19
RHBDD3-205ENST00000488106 HRCP23327 699 aa34.95■■■■□ 3.19
RHBDD3-205ENST00000488106 XRN1Q8IZH2 1706 aaKnown RBP34.94■■■■□ 3.18
RHBDD3-205ENST00000488106 TMEM94Q12767 1356 aa34.92■■■■□ 3.18
RHBDD3-205ENST00000488106 PIK3R4Q99570 1358 aa34.9■■■■□ 3.18
RHBDD3-205ENST00000488106 RPGRIP1LQ68CZ1 1315 aa34.9■■■■□ 3.18
RHBDD3-205ENST00000488106 PROSER2Q86WR7 435 aaPredicted RBP34.9■■■■□ 3.18
RHBDD3-205ENST00000488106 SCAF1Q9H7N4 1312 aaKnown RBP34.89■■■■□ 3.18
RHBDD3-205ENST00000488106 RGL3Q3MIN7 710 aa34.89■■■■□ 3.18
RHBDD3-205ENST00000488106 TOM1O60784 492 aa34.88■■■■□ 3.17
RHBDD3-205ENST00000488106 RBM33Q96EV2 1170 aaKnown RBP34.88■■■■□ 3.17
RHBDD3-205ENST00000488106 PTPRUQ92729 1446 aa34.87■■■■□ 3.17
RHBDD3-205ENST00000488106 VGFO15240 615 aaPredicted RBP34.86■■■■□ 3.17
RHBDD3-205ENST00000488106 PIP4K2BP78356 416 aa34.86■■■■□ 3.17
RHBDD3-205ENST00000488106 ANKRD30BQ9BXX2 1392 aa34.85■■■■□ 3.17
RHBDD3-205ENST00000488106 METP08581 1390 aa34.83■■■■□ 3.17
RHBDD3-205ENST00000488106 AMOTL2Q9Y2J4 779 aa34.78■■■■□ 3.16
RHBDD3-205ENST00000488106 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.78■■■■□ 3.16
RHBDD3-205ENST00000488106 ADGRF5Q8IZF2 1346 aa34.76■■■■□ 3.15
RHBDD3-205ENST00000488106 MSH6P52701 1360 aa34.74■■■■□ 3.15
RHBDD3-205ENST00000488106 NALCNQ8IZF0 1738 aa34.72■■■■□ 3.15
RHBDD3-205ENST00000488106 MYOM2P54296 1465 aa34.71■■■■□ 3.15
RHBDD3-205ENST00000488106 LAMC1P11047 1609 aa34.7■■■■□ 3.15
RHBDD3-205ENST00000488106 ROBO1Q9Y6N7 1651 aa34.7■■■■□ 3.15
RHBDD3-205ENST00000488106 C14orf37Q86TY3 774 aa34.7■■■■□ 3.15
RHBDD3-205ENST00000488106 PIK3C2GO75747 1445 aa34.7■■■■□ 3.15
RHBDD3-205ENST00000488106 NCOA3Q9Y6Q9 1424 aa34.67■■■■□ 3.14
RHBDD3-205ENST00000488106 ASXL1Q8IXJ9 1541 aa34.65■■■■□ 3.14
RHBDD3-205ENST00000488106 KNDC1Q76NI1 1749 aa34.65■■■■□ 3.14
RHBDD3-205ENST00000488106 TRIM26Q12899 539 aaPredicted RBP34.65■■■■□ 3.14
RHBDD3-205ENST00000488106 NRXN1Q9ULB1 1477 aa34.64■■■■□ 3.14
RHBDD3-205ENST00000488106 HSPA1LP34931 641 aa34.62■■■■□ 3.13
RHBDD3-205ENST00000488106 PTCH1Q13635 1447 aa34.62■■■■□ 3.13
RHBDD3-205ENST00000488106 PRAG1Q86YV5 1406 aa34.56■■■■□ 3.12
RHBDD3-205ENST00000488106 ROBO2Q9HCK4 1378 aa34.56■■■■□ 3.12
RHBDD3-205ENST00000488106 ADGRL3Q9HAR2 1447 aa34.55■■■■□ 3.12
RHBDD3-205ENST00000488106 C19orf44Q9H6X5 657 aa34.54■■■■□ 3.12
RHBDD3-205ENST00000488106 FAM135BQ49AJ0 1406 aa34.53■■■■□ 3.12
RHBDD3-205ENST00000488106 PHLPP1O60346 1717 aa34.52■■■■□ 3.12
RHBDD3-205ENST00000488106 DCCP43146 1447 aa34.52■■■■□ 3.12
RHBDD3-205ENST00000488106 ATF3P18847 181 aa34.51■■■■□ 3.12
RHBDD3-205ENST00000488106 DCAF11Q8TEB1 546 aa34.51■■■■□ 3.12
RHBDD3-205ENST00000488106 TMEM132EQ6IEE7 984 aa34.5■■■■□ 3.11
RHBDD3-205ENST00000488106 KDM2AQ9Y2K7 1162 aa34.5■■■■□ 3.11
RHBDD3-205ENST00000488106 CADPS2Q86UW7 1296 aa34.49■■■■□ 3.11
RHBDD3-205ENST00000488106 SLAIN2Q9P270 581 aa34.49■■■■□ 3.11
RHBDD3-205ENST00000488106 STK26Q9P289 416 aa34.49■■■■□ 3.11
RHBDD3-205ENST00000488106 DHX57Q6P158 1386 aaKnown RBP34.49■■■■□ 3.11
RHBDD3-205ENST00000488106 LRPPRCP42704 1394 aaKnown RBP34.48■■■■□ 3.11
RHBDD3-205ENST00000488106 CFAP70Q5T0N1 1121 aa34.47■■■■□ 3.11
RHBDD3-205ENST00000488106 YTHDC2Q9H6S0 1430 aaKnown RBP34.47■■■■□ 3.11
RHBDD3-205ENST00000488106 C14orf93Q9H972 538 aaKnown RBP34.46■■■■□ 3.11
RHBDD3-205ENST00000488106 TECPR2O15040 1411 aa34.46■■■■□ 3.11
RHBDD3-205ENST00000488106 MST1RQ04912 1400 aa34.41■■■■□ 3.1
RHBDD3-205ENST00000488106 ADGRB1O14514 1584 aa34.4■■■■□ 3.1
RHBDD3-205ENST00000488106 ABCC11Q96J66 1382 aa34.39■■■■□ 3.1
RHBDD3-205ENST00000488106 KIAA1210Q9ULL0 1709 aa34.39■■■■□ 3.1
RHBDD3-205ENST00000488106 CDC42BPGQ6DT37 1551 aa34.39■■■■□ 3.1
RHBDD3-205ENST00000488106 DISP3Q9P2K9 1392 aa34.38■■■■□ 3.09
RHBDD3-205ENST00000488106 COL16A1Q07092 1604 aaPredicted RBP34.37■■■■□ 3.09
RHBDD3-205ENST00000488106 NHSL1Q5SYE7 1610 aa34.36■■■■□ 3.09
RHBDD3-205ENST00000488106 MED1Q15648 1581 aaPredicted RBP34.36■■■■□ 3.09
RHBDD3-205ENST00000488106 AHDC1Q5TGY3 1603 aaPredicted RBP34.35■■■■□ 3.09
RHBDD3-205ENST00000488106 STAC3Q96MF2 364 aa34.35■■■■□ 3.09
RHBDD3-205ENST00000488106 PLEKHH1Q9ULM0 1364 aa34.35■■■■□ 3.09
RHBDD3-205ENST00000488106 WAPLQ7Z5K2 1190 aa34.34■■■■□ 3.09
RHBDD3-205ENST00000488106 SIN3AQ96ST3 1273 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms