RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.35
RAB11FIP3-210ENST00000487899 ITGAEP38570 1179 aa17.21■□□□□ 0.35
RAB11FIP3-210ENST00000487899 SLC52A1Q9NWF4 448 aa17.21■□□□□ 0.35
RAB11FIP3-210ENST00000487899 TRPM2O94759 1503 aa17.21■□□□□ 0.34
RAB11FIP3-210ENST00000487899 KIF1BO60333 1816 aa17.2■□□□□ 0.34
RAB11FIP3-210ENST00000487899 NUP155O75694 1391 aa17.19■□□□□ 0.34
RAB11FIP3-210ENST00000487899 EID1Q9Y6B2 187 aa17.19■□□□□ 0.34
RAB11FIP3-210ENST00000487899 RIMS2Q9UQ26 1411 aa17.19■□□□□ 0.34
RAB11FIP3-210ENST00000487899 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
RAB11FIP3-210ENST00000487899 HFM1A2PYH4 1435 aa17.18■□□□□ 0.34
RAB11FIP3-210ENST00000487899 MED1Q15648 1581 aaPredicted RBP17.18■□□□□ 0.34
RAB11FIP3-210ENST00000487899 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
RAB11FIP3-210ENST00000487899 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
RAB11FIP3-210ENST00000487899 ROBO1Q9Y6N7 1651 aa17.15■□□□□ 0.34
RAB11FIP3-210ENST00000487899 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
RAB11FIP3-210ENST00000487899 SETBP1Q9Y6X0 1596 aa17.15■□□□□ 0.34
RAB11FIP3-210ENST00000487899 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
RAB11FIP3-210ENST00000487899 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
RAB11FIP3-210ENST00000487899 TOM1O60784 492 aa17.13■□□□□ 0.33
RAB11FIP3-210ENST00000487899 PPLO60437 1756 aa17.11■□□□□ 0.33
RAB11FIP3-210ENST00000487899 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
RAB11FIP3-210ENST00000487899 SLC26A8Q96RN1 970 aa17.11■□□□□ 0.33
RAB11FIP3-210ENST00000487899 HSPA1LP34931 641 aa17.1■□□□□ 0.33
RAB11FIP3-210ENST00000487899 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
RAB11FIP3-210ENST00000487899 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
RAB11FIP3-210ENST00000487899 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.09■□□□□ 0.33
RAB11FIP3-210ENST00000487899 IFT172Q9UG01 1749 aa17.08■□□□□ 0.32
RAB11FIP3-210ENST00000487899 KCNA6P17658 529 aa17.07■□□□□ 0.32
RAB11FIP3-210ENST00000487899 NALCNQ8IZF0 1738 aa17.05■□□□□ 0.32
RAB11FIP3-210ENST00000487899 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
RAB11FIP3-210ENST00000487899 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
RAB11FIP3-210ENST00000487899 PPP1R15AO75807 674 aaPredicted RBP17.03■□□□□ 0.32
RAB11FIP3-210ENST00000487899 CHGAP10645 457 aaKnown RBP17.03■□□□□ 0.32
RAB11FIP3-210ENST00000487899 PTPRUQ92729 1446 aa17.03■□□□□ 0.32
RAB11FIP3-210ENST00000487899 PIK3R4Q99570 1358 aa17.02■□□□□ 0.31
RAB11FIP3-210ENST00000487899 COL16A1Q07092 1604 aaPredicted RBP17.01■□□□□ 0.31
RAB11FIP3-210ENST00000487899 NUTM2DQ5VT03 806 aaPredicted RBP17.01■□□□□ 0.31
RAB11FIP3-210ENST00000487899 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAB11FIP3-210ENST00000487899 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
RAB11FIP3-210ENST00000487899 RBM33Q96EV2 1170 aaKnown RBP17■□□□□ 0.31
RAB11FIP3-210ENST00000487899 TBX22Q9Y458 520 aa16.99■□□□□ 0.31
RAB11FIP3-210ENST00000487899 NCOA3Q9Y6Q9 1424 aa16.97■□□□□ 0.31
RAB11FIP3-210ENST00000487899 HDGFP51858 240 aaKnown RBP16.97■□□□□ 0.31
RAB11FIP3-210ENST00000487899 PROSER2Q86WR7 435 aaPredicted RBP16.97■□□□□ 0.31
RAB11FIP3-210ENST00000487899 BCANQ96GW7 911 aa16.97■□□□□ 0.31
RAB11FIP3-210ENST00000487899 MSH6P52701 1360 aa16.97■□□□□ 0.31
RAB11FIP3-210ENST00000487899 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.3
RAB11FIP3-210ENST00000487899 AHDC1Q5TGY3 1603 aaPredicted RBP16.96■□□□□ 0.3
RAB11FIP3-210ENST00000487899 SHPRHQ149N8 1683 aa16.94■□□□□ 0.3
RAB11FIP3-210ENST00000487899 METP08581 1390 aa16.93■□□□□ 0.3
RAB11FIP3-210ENST00000487899 PRAG1Q86YV5 1406 aa16.93■□□□□ 0.3
RAB11FIP3-210ENST00000487899 KNDC1Q76NI1 1749 aa16.93■□□□□ 0.3
RAB11FIP3-210ENST00000487899 DCCP43146 1447 aa16.92■□□□□ 0.3
RAB11FIP3-210ENST00000487899 SPATA31E1Q6ZUB1 1445 aa16.9■□□□□ 0.3
RAB11FIP3-210ENST00000487899 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
RAB11FIP3-210ENST00000487899 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
RAB11FIP3-210ENST00000487899 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
RAB11FIP3-210ENST00000487899 ASXL1Q8IXJ9 1541 aa16.9■□□□□ 0.3
RAB11FIP3-210ENST00000487899 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
RAB11FIP3-210ENST00000487899 LAMC1P11047 1609 aa16.88■□□□□ 0.29
RAB11FIP3-210ENST00000487899 ADGRL3Q9HAR2 1447 aa16.88■□□□□ 0.29
RAB11FIP3-210ENST00000487899 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
RAB11FIP3-210ENST00000487899 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
RAB11FIP3-210ENST00000487899 MST1RQ04912 1400 aa16.87■□□□□ 0.29
RAB11FIP3-210ENST00000487899 FOXD1Q16676 465 aa16.86■□□□□ 0.29
RAB11FIP3-210ENST00000487899 SLAIN2Q9P270 581 aa16.85■□□□□ 0.29
RAB11FIP3-210ENST00000487899 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
RAB11FIP3-210ENST00000487899 CDC42BPGQ6DT37 1551 aa16.83■□□□□ 0.28
RAB11FIP3-210ENST00000487899 LRP6O75581 1613 aa16.82■□□□□ 0.28
RAB11FIP3-210ENST00000487899 RAB3GAP2Q9H2M9 1393 aa16.82■□□□□ 0.28
RAB11FIP3-210ENST00000487899 PIK3C2GO75747 1445 aa16.81■□□□□ 0.28
RAB11FIP3-210ENST00000487899 C14orf37Q86TY3 774 aa16.81■□□□□ 0.28
RAB11FIP3-210ENST00000487899 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
RAB11FIP3-210ENST00000487899 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
RAB11FIP3-210ENST00000487899 RPGRIP1LQ68CZ1 1315 aa16.8■□□□□ 0.28
RAB11FIP3-210ENST00000487899 CADPS2Q86UW7 1296 aa16.8■□□□□ 0.28
RAB11FIP3-210ENST00000487899 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
RAB11FIP3-210ENST00000487899 MYOM2P54296 1465 aa16.8■□□□□ 0.28
RAB11FIP3-210ENST00000487899 NRXN1Q9ULB1 1477 aa16.8■□□□□ 0.28
RAB11FIP3-210ENST00000487899 RGS17Q9UGC6 210 aaPredicted RBP16.79■□□□□ 0.28
RAB11FIP3-210ENST00000487899 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
RAB11FIP3-210ENST00000487899 TECPR2O15040 1411 aa16.79■□□□□ 0.28
RAB11FIP3-210ENST00000487899 JCADQ9P266 1359 aa16.78■□□□□ 0.28
RAB11FIP3-210ENST00000487899 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
RAB11FIP3-210ENST00000487899 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.28
RAB11FIP3-210ENST00000487899 ATF3P18847 181 aa16.77■□□□□ 0.28
RAB11FIP3-210ENST00000487899 BRINP3Q76B58 766 aa16.76■□□□□ 0.27
RAB11FIP3-210ENST00000487899 ANKRD30BQ9BXX2 1392 aa16.76■□□□□ 0.27
RAB11FIP3-210ENST00000487899 C1orf167Q5SNV9 1468 aa16.74■□□□□ 0.27
RAB11FIP3-210ENST00000487899 ADGRF5Q8IZF2 1346 aa16.74■□□□□ 0.27
RAB11FIP3-210ENST00000487899 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
RAB11FIP3-210ENST00000487899 COL22A1Q8NFW1 1626 aaPredicted RBP16.73■□□□□ 0.27
RAB11FIP3-210ENST00000487899 MARF1Q9Y4F3 1742 aaKnown RBP16.71■□□□□ 0.27
RAB11FIP3-210ENST00000487899 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
RAB11FIP3-210ENST00000487899 KIF1AQ12756 1690 aa16.7■□□□□ 0.26
RAB11FIP3-210ENST00000487899 ADGRB1O14514 1584 aa16.7■□□□□ 0.26
RAB11FIP3-210ENST00000487899 LRPPRCP42704 1394 aaKnown RBP16.69■□□□□ 0.26
RAB11FIP3-210ENST00000487899 ADGRB2O60241 1585 aa16.68■□□□□ 0.26
RAB11FIP3-210ENST00000487899 RGL3Q3MIN7 710 aa16.68■□□□□ 0.26
RAB11FIP3-210ENST00000487899 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms