RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 LRRC7Q96NW7 1537 aa27.49■■□□□ 1.99
CLDN11-206ENST00000486429 PLEKHG1Q9ULL1 1385 aa27.48■■□□□ 1.99
CLDN11-206ENST00000486429 HDGFP51858 240 aaKnown RBP27.48■■□□□ 1.99
CLDN11-206ENST00000486429 CLTCL1P53675 1640 aa27.47■■□□□ 1.99
CLDN11-206ENST00000486429 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.45■■□□□ 1.98
CLDN11-206ENST00000486429 BCANQ96GW7 911 aa27.45■■□□□ 1.98
CLDN11-206ENST00000486429 SLC26A8Q96RN1 970 aa27.44■■□□□ 1.98
CLDN11-206ENST00000486429 SLC4A1APQ9BWU0 796 aaKnown RBP27.43■■□□□ 1.98
CLDN11-206ENST00000486429 NWD1Q149M9 1564 aa27.43■■□□□ 1.98
CLDN11-206ENST00000486429 DIP2AQ14689 1571 aa27.39■■□□□ 1.97
CLDN11-206ENST00000486429 TOM1O60784 492 aa27.38■■□□□ 1.97
CLDN11-206ENST00000486429 SENP3Q9H4L4 574 aaPredicted RBP27.38■■□□□ 1.97
CLDN11-206ENST00000486429 KIF1BO60333 1816 aa27.38■■□□□ 1.97
CLDN11-206ENST00000486429 NKTRP30414 1462 aaKnown RBP27.38■■□□□ 1.97
CLDN11-206ENST00000486429 KCNA6P17658 529 aa27.36■■□□□ 1.97
CLDN11-206ENST00000486429 NUTM2DQ5VT03 806 aaPredicted RBP27.36■■□□□ 1.97
CLDN11-206ENST00000486429 SETD5Q9C0A6 1442 aa27.35■■□□□ 1.97
CLDN11-206ENST00000486429 XIRP1Q702N8 1843 aaKnown RBP27.35■■□□□ 1.97
CLDN11-206ENST00000486429 ALKQ9UM73 1620 aa27.34■■□□□ 1.97
CLDN11-206ENST00000486429 ZNF326Q5BKZ1 582 aaKnown RBP27.34■■□□□ 1.97
CLDN11-206ENST00000486429 ADAMTS13Q76LX8 1427 aa27.33■■□□□ 1.97
CLDN11-206ENST00000486429 SCAF1Q9H7N4 1312 aaKnown RBP27.33■■□□□ 1.97
CLDN11-206ENST00000486429 NEXMIFQ5QGS0 1516 aa27.32■■□□□ 1.96
CLDN11-206ENST00000486429 PIP4K2BP78356 416 aa27.31■■□□□ 1.96
CLDN11-206ENST00000486429 CHD2O14647 1828 aaKnown RBP27.31■■□□□ 1.96
CLDN11-206ENST00000486429 ACIN1Q9UKV3 1341 aaKnown RBP27.31■■□□□ 1.96
CLDN11-206ENST00000486429 TMEM94Q12767 1356 aa27.31■■□□□ 1.96
CLDN11-206ENST00000486429 TBX22Q9Y458 520 aa27.3■■□□□ 1.96
CLDN11-206ENST00000486429 SETBP1Q9Y6X0 1596 aa27.3■■□□□ 1.96
CLDN11-206ENST00000486429 NRXN3Q9Y4C0 1643 aa27.29■■□□□ 1.96
CLDN11-206ENST00000486429 MPHOSPH9Q99550 1183 aa27.27■■□□□ 1.96
CLDN11-206ENST00000486429 PIK3R4Q99570 1358 aa27.26■■□□□ 1.95
CLDN11-206ENST00000486429 RAB3GAP2Q9H2M9 1393 aa27.26■■□□□ 1.95
CLDN11-206ENST00000486429 FOXD1Q16676 465 aa27.26■■□□□ 1.95
CLDN11-206ENST00000486429 PROSER2Q86WR7 435 aaPredicted RBP27.25■■□□□ 1.95
CLDN11-206ENST00000486429 CCDC144AA2RUR9 1427 aa27.24■■□□□ 1.95
CLDN11-206ENST00000486429 PPLO60437 1756 aa27.18■■□□□ 1.94
CLDN11-206ENST00000486429 RBM33Q96EV2 1170 aaKnown RBP27.18■■□□□ 1.94
CLDN11-206ENST00000486429 XRN1Q8IZH2 1706 aaKnown RBP27.17■■□□□ 1.94
CLDN11-206ENST00000486429 HSPA1LP34931 641 aa27.17■■□□□ 1.94
CLDN11-206ENST00000486429 MSH6P52701 1360 aa27.17■■□□□ 1.94
CLDN11-206ENST00000486429 PTPRUQ92729 1446 aa27.16■■□□□ 1.94
CLDN11-206ENST00000486429 RPGRIP1LQ68CZ1 1315 aa27.16■■□□□ 1.94
CLDN11-206ENST00000486429 NCOA3Q9Y6Q9 1424 aa27.14■■□□□ 1.93
CLDN11-206ENST00000486429 SPATA31E1Q6ZUB1 1445 aa27.13■■□□□ 1.93
CLDN11-206ENST00000486429 VGFO15240 615 aaPredicted RBP27.12■■□□□ 1.93
CLDN11-206ENST00000486429 AMOTL2Q9Y2J4 779 aa27.11■■□□□ 1.93
CLDN11-206ENST00000486429 METP08581 1390 aa27.1■■□□□ 1.93
CLDN11-206ENST00000486429 SETD1AO15047 1707 aaKnown RBP27.1■■□□□ 1.93
CLDN11-206ENST00000486429 IFT172Q9UG01 1749 aa27.09■■□□□ 1.93
CLDN11-206ENST00000486429 C14orf37Q86TY3 774 aa27.08■■□□□ 1.93
CLDN11-206ENST00000486429 FAM135BQ49AJ0 1406 aa27.07■■□□□ 1.92
CLDN11-206ENST00000486429 ROBO1Q9Y6N7 1651 aa27.07■■□□□ 1.92
CLDN11-206ENST00000486429 DISP3Q9P2K9 1392 aa27.06■■□□□ 1.92
CLDN11-206ENST00000486429 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.04■■□□□ 1.92
CLDN11-206ENST00000486429 RGL3Q3MIN7 710 aa27.03■■□□□ 1.92
CLDN11-206ENST00000486429 ANKRD30BQ9BXX2 1392 aa27.03■■□□□ 1.92
CLDN11-206ENST00000486429 HRCP23327 699 aa27.02■■□□□ 1.92
CLDN11-206ENST00000486429 PTCH1Q13635 1447 aa26.99■■□□□ 1.91
CLDN11-206ENST00000486429 C19orf44Q9H6X5 657 aa26.99■■□□□ 1.91
CLDN11-206ENST00000486429 DCCP43146 1447 aa26.99■■□□□ 1.91
CLDN11-206ENST00000486429 MED1Q15648 1581 aaPredicted RBP26.98■■□□□ 1.91
CLDN11-206ENST00000486429 CADPS2Q86UW7 1296 aa26.98■■□□□ 1.91
CLDN11-206ENST00000486429 SLAIN2Q9P270 581 aa26.98■■□□□ 1.91
CLDN11-206ENST00000486429 PRAG1Q86YV5 1406 aa26.98■■□□□ 1.91
CLDN11-206ENST00000486429 ADGRF5Q8IZF2 1346 aa26.97■■□□□ 1.91
CLDN11-206ENST00000486429 ATF3P18847 181 aa26.96■■□□□ 1.91
CLDN11-206ENST00000486429 ADGRL3Q9HAR2 1447 aa26.96■■□□□ 1.91
CLDN11-206ENST00000486429 NALCNQ8IZF0 1738 aa26.96■■□□□ 1.91
CLDN11-206ENST00000486429 PIK3C2GO75747 1445 aa26.95■■□□□ 1.9
CLDN11-206ENST00000486429 MYOM2P54296 1465 aa26.93■■□□□ 1.9
CLDN11-206ENST00000486429 ASXL1Q8IXJ9 1541 aa26.9■■□□□ 1.9
CLDN11-206ENST00000486429 ROBO2Q9HCK4 1378 aa26.9■■□□□ 1.9
CLDN11-206ENST00000486429 PHLPP1O60346 1717 aa26.9■■□□□ 1.9
CLDN11-206ENST00000486429 NRXN1Q9ULB1 1477 aa26.89■■□□□ 1.9
CLDN11-206ENST00000486429 LAMC1P11047 1609 aa26.89■■□□□ 1.9
CLDN11-206ENST00000486429 MST1RQ04912 1400 aa26.86■■□□□ 1.89
CLDN11-206ENST00000486429 KNDC1Q76NI1 1749 aa26.86■■□□□ 1.89
CLDN11-206ENST00000486429 AHDC1Q5TGY3 1603 aaPredicted RBP26.85■■□□□ 1.89
CLDN11-206ENST00000486429 TECPR2O15040 1411 aa26.84■■□□□ 1.89
CLDN11-206ENST00000486429 COL16A1Q07092 1604 aaPredicted RBP26.84■■□□□ 1.89
CLDN11-206ENST00000486429 LRPPRCP42704 1394 aaKnown RBP26.84■■□□□ 1.89
CLDN11-206ENST00000486429 BRINP3Q76B58 766 aa26.79■■□□□ 1.88
CLDN11-206ENST00000486429 YTHDC2Q9H6S0 1430 aaKnown RBP26.79■■□□□ 1.88
CLDN11-206ENST00000486429 CDC42BPGQ6DT37 1551 aa26.79■■□□□ 1.88
CLDN11-206ENST00000486429 STK26Q9P289 416 aa26.78■■□□□ 1.88
CLDN11-206ENST00000486429 ABCC11Q96J66 1382 aa26.78■■□□□ 1.88
CLDN11-206ENST00000486429 TMEM132EQ6IEE7 984 aa26.77■■□□□ 1.88
CLDN11-206ENST00000486429 C14orf93Q9H972 538 aaKnown RBP26.77■■□□□ 1.88
CLDN11-206ENST00000486429 JCADQ9P266 1359 aa26.76■■□□□ 1.87
CLDN11-206ENST00000486429 NHSL1Q5SYE7 1610 aa26.76■■□□□ 1.87
CLDN11-206ENST00000486429 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
CLDN11-206ENST00000486429 C1orf167Q5SNV9 1468 aa26.74■■□□□ 1.87
CLDN11-206ENST00000486429 CFAP70Q5T0N1 1121 aa26.74■■□□□ 1.87
CLDN11-206ENST00000486429 ILDR2Q71H61 639 aa26.74■■□□□ 1.87
CLDN11-206ENST00000486429 DHX57Q6P158 1386 aaKnown RBP26.72■■□□□ 1.87
CLDN11-206ENST00000486429 DCAF11Q8TEB1 546 aa26.72■■□□□ 1.87
CLDN11-206ENST00000486429 KDM2AQ9Y2K7 1162 aa26.7■■□□□ 1.86
CLDN11-206ENST00000486429 ADGRB1O14514 1584 aa26.7■■□□□ 1.86
CLDN11-206ENST00000486429 PLEKHH1Q9ULM0 1364 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms