RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 LRRC7Q96NW7 1537 aa25.04■■□□□ 1.6
CCHCR1-214ENST00000486060 CHGAP10645 457 aaKnown RBP25.04■■□□□ 1.6
CCHCR1-214ENST00000486060 ALKQ9UM73 1620 aa25.02■■□□□ 1.6
CCHCR1-214ENST00000486060 CHD2O14647 1828 aaKnown RBP25.01■■□□□ 1.59
CCHCR1-214ENST00000486060 SLC26A8Q96RN1 970 aa25■■□□□ 1.59
CCHCR1-214ENST00000486060 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
CCHCR1-214ENST00000486060 PLEKHG1Q9ULL1 1385 aa25■■□□□ 1.59
CCHCR1-214ENST00000486060 NUTM2DQ5VT03 806 aaPredicted RBP24.98■■□□□ 1.59
CCHCR1-214ENST00000486060 SLC4A1APQ9BWU0 796 aaKnown RBP24.98■■□□□ 1.59
CCHCR1-214ENST00000486060 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
CCHCR1-214ENST00000486060 NRXN3Q9Y4C0 1643 aa24.97■■□□□ 1.59
CCHCR1-214ENST00000486060 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.59
CCHCR1-214ENST00000486060 UBAP1LF5GYI3 381 aa24.95■■□□□ 1.58
CCHCR1-214ENST00000486060 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.58
CCHCR1-214ENST00000486060 FOXD1Q16676 465 aa24.94■■□□□ 1.58
CCHCR1-214ENST00000486060 NEXMIFQ5QGS0 1516 aa24.94■■□□□ 1.58
CCHCR1-214ENST00000486060 PPP1R15AO75807 674 aaPredicted RBP24.91■■□□□ 1.58
CCHCR1-214ENST00000486060 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.91■■□□□ 1.58
CCHCR1-214ENST00000486060 KCNA6P17658 529 aa24.9■■□□□ 1.58
CCHCR1-214ENST00000486060 MPHOSPH9Q99550 1183 aa24.9■■□□□ 1.58
CCHCR1-214ENST00000486060 RAB3GAP2Q9H2M9 1393 aa24.9■■□□□ 1.58
CCHCR1-214ENST00000486060 DIP2AQ14689 1571 aa24.89■■□□□ 1.58
CCHCR1-214ENST00000486060 HDGFP51858 240 aaKnown RBP24.89■■□□□ 1.58
CCHCR1-214ENST00000486060 PPLO60437 1756 aa24.89■■□□□ 1.57
CCHCR1-214ENST00000486060 BCANQ96GW7 911 aa24.88■■□□□ 1.57
CCHCR1-214ENST00000486060 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
CCHCR1-214ENST00000486060 TBX22Q9Y458 520 aa24.86■■□□□ 1.57
CCHCR1-214ENST00000486060 NKTRP30414 1462 aaKnown RBP24.85■■□□□ 1.57
CCHCR1-214ENST00000486060 ZNF326Q5BKZ1 582 aaKnown RBP24.84■■□□□ 1.57
CCHCR1-214ENST00000486060 SETD1AO15047 1707 aaKnown RBP24.83■■□□□ 1.57
CCHCR1-214ENST00000486060 RBM33Q96EV2 1170 aaKnown RBP24.83■■□□□ 1.57
CCHCR1-214ENST00000486060 IFT172Q9UG01 1749 aa24.83■■□□□ 1.57
CCHCR1-214ENST00000486060 TMEM94Q12767 1356 aa24.82■■□□□ 1.56
CCHCR1-214ENST00000486060 TOM1O60784 492 aa24.82■■□□□ 1.56
CCHCR1-214ENST00000486060 PTPRUQ92729 1446 aa24.81■■□□□ 1.56
CCHCR1-214ENST00000486060 PIP4K2BP78356 416 aa24.8■■□□□ 1.56
CCHCR1-214ENST00000486060 XRN1Q8IZH2 1706 aaKnown RBP24.8■■□□□ 1.56
CCHCR1-214ENST00000486060 PROSER2Q86WR7 435 aaPredicted RBP24.78■■□□□ 1.56
CCHCR1-214ENST00000486060 PIK3R4Q99570 1358 aa24.77■■□□□ 1.56
CCHCR1-214ENST00000486060 SPATA31E1Q6ZUB1 1445 aa24.77■■□□□ 1.56
CCHCR1-214ENST00000486060 CCDC144AA2RUR9 1427 aa24.76■■□□□ 1.55
CCHCR1-214ENST00000486060 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
CCHCR1-214ENST00000486060 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
CCHCR1-214ENST00000486060 METP08581 1390 aa24.74■■□□□ 1.55
CCHCR1-214ENST00000486060 HSPA1LP34931 641 aa24.71■■□□□ 1.55
CCHCR1-214ENST00000486060 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.71■■□□□ 1.55
CCHCR1-214ENST00000486060 RPGRIP1LQ68CZ1 1315 aa24.7■■□□□ 1.54
CCHCR1-214ENST00000486060 AMOTL2Q9Y2J4 779 aa24.69■■□□□ 1.54
CCHCR1-214ENST00000486060 HRCP23327 699 aa24.68■■□□□ 1.54
CCHCR1-214ENST00000486060 ROBO1Q9Y6N7 1651 aa24.67■■□□□ 1.54
CCHCR1-214ENST00000486060 VGFO15240 615 aaPredicted RBP24.66■■□□□ 1.54
CCHCR1-214ENST00000486060 RGL3Q3MIN7 710 aa24.66■■□□□ 1.54
CCHCR1-214ENST00000486060 ANKRD30BQ9BXX2 1392 aa24.65■■□□□ 1.54
CCHCR1-214ENST00000486060 ADGRF5Q8IZF2 1346 aa24.64■■□□□ 1.54
CCHCR1-214ENST00000486060 NCOA3Q9Y6Q9 1424 aa24.64■■□□□ 1.54
CCHCR1-214ENST00000486060 MSH6P52701 1360 aa24.64■■□□□ 1.53
CCHCR1-214ENST00000486060 NALCNQ8IZF0 1738 aa24.63■■□□□ 1.53
CCHCR1-214ENST00000486060 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
CCHCR1-214ENST00000486060 ASXL1Q8IXJ9 1541 aa24.59■■□□□ 1.53
CCHCR1-214ENST00000486060 PIK3C2GO75747 1445 aa24.56■■□□□ 1.52
CCHCR1-214ENST00000486060 PRAG1Q86YV5 1406 aa24.55■■□□□ 1.52
CCHCR1-214ENST00000486060 NRXN1Q9ULB1 1477 aa24.55■■□□□ 1.52
CCHCR1-214ENST00000486060 C19orf44Q9H6X5 657 aa24.54■■□□□ 1.52
CCHCR1-214ENST00000486060 SLAIN2Q9P270 581 aa24.54■■□□□ 1.52
CCHCR1-214ENST00000486060 ROBO2Q9HCK4 1378 aa24.54■■□□□ 1.52
CCHCR1-214ENST00000486060 PTCH1Q13635 1447 aa24.53■■□□□ 1.52
CCHCR1-214ENST00000486060 C14orf37Q86TY3 774 aa24.53■■□□□ 1.52
CCHCR1-214ENST00000486060 PHLPP1O60346 1717 aa24.52■■□□□ 1.52
CCHCR1-214ENST00000486060 KNDC1Q76NI1 1749 aa24.52■■□□□ 1.52
CCHCR1-214ENST00000486060 MYOM2P54296 1465 aa24.52■■□□□ 1.52
CCHCR1-214ENST00000486060 MED1Q15648 1581 aaPredicted RBP24.51■■□□□ 1.51
CCHCR1-214ENST00000486060 ADGRL3Q9HAR2 1447 aa24.51■■□□□ 1.51
CCHCR1-214ENST00000486060 DCCP43146 1447 aa24.5■■□□□ 1.51
CCHCR1-214ENST00000486060 DISP3Q9P2K9 1392 aa24.49■■□□□ 1.51
CCHCR1-214ENST00000486060 LAMC1P11047 1609 aa24.49■■□□□ 1.51
CCHCR1-214ENST00000486060 CADPS2Q86UW7 1296 aa24.47■■□□□ 1.51
CCHCR1-214ENST00000486060 COL16A1Q07092 1604 aaPredicted RBP24.46■■□□□ 1.51
CCHCR1-214ENST00000486060 MST1RQ04912 1400 aa24.46■■□□□ 1.51
CCHCR1-214ENST00000486060 ATF3P18847 181 aa24.46■■□□□ 1.51
CCHCR1-214ENST00000486060 TMEM132EQ6IEE7 984 aa24.45■■□□□ 1.5
CCHCR1-214ENST00000486060 TECPR2O15040 1411 aa24.44■■□□□ 1.5
CCHCR1-214ENST00000486060 LRPPRCP42704 1394 aaKnown RBP24.43■■□□□ 1.5
CCHCR1-214ENST00000486060 DHX57Q6P158 1386 aaKnown RBP24.43■■□□□ 1.5
CCHCR1-214ENST00000486060 AHDC1Q5TGY3 1603 aaPredicted RBP24.43■■□□□ 1.5
CCHCR1-214ENST00000486060 C14orf93Q9H972 538 aaKnown RBP24.43■■□□□ 1.5
CCHCR1-214ENST00000486060 CFAP70Q5T0N1 1121 aa24.42■■□□□ 1.5
CCHCR1-214ENST00000486060 NHSL1Q5SYE7 1610 aa24.42■■□□□ 1.5
CCHCR1-214ENST00000486060 YTHDC2Q9H6S0 1430 aaKnown RBP24.41■■□□□ 1.5
CCHCR1-214ENST00000486060 STK26Q9P289 416 aa24.4■■□□□ 1.5
CCHCR1-214ENST00000486060 BRINP3Q76B58 766 aa24.39■■□□□ 1.49
CCHCR1-214ENST00000486060 ABCC11Q96J66 1382 aa24.39■■□□□ 1.49
CCHCR1-214ENST00000486060 ADGRB1O14514 1584 aa24.38■■□□□ 1.49
CCHCR1-214ENST00000486060 PLEKHH1Q9ULM0 1364 aa24.38■■□□□ 1.49
CCHCR1-214ENST00000486060 ILDR2Q71H61 639 aa24.37■■□□□ 1.49
CCHCR1-214ENST00000486060 WAPLQ7Z5K2 1190 aa24.37■■□□□ 1.49
CCHCR1-214ENST00000486060 CDC42BPGQ6DT37 1551 aa24.37■■□□□ 1.49
CCHCR1-214ENST00000486060 DCAF11Q8TEB1 546 aa24.36■■□□□ 1.49
CCHCR1-214ENST00000486060 KDM2AQ9Y2K7 1162 aa24.36■■□□□ 1.49
CCHCR1-214ENST00000486060 C1orf167Q5SNV9 1468 aa24.34■■□□□ 1.49
CCHCR1-214ENST00000486060 RGPD8O14715 1765 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms