RNA–Protein interactions for RNA: ENST00000485682.6

TSSC4-209, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 2

Gene TSSC4, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-209ENST00000485682 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.84■■□□□ 1.73
TSSC4-209ENST00000485682 ZNF335Q9H4Z2 1342 aaPredicted RBP25.83■■□□□ 1.73
TSSC4-209ENST00000485682 KIF1BO60333 1816 aa25.81■■□□□ 1.72
TSSC4-209ENST00000485682 LTBP4Q8N2S1 1624 aa25.81■■□□□ 1.72
TSSC4-209ENST00000485682 CCDC144AA2RUR9 1427 aa25.8■■□□□ 1.72
TSSC4-209ENST00000485682 ZNF326Q5BKZ1 582 aaKnown RBP25.8■■□□□ 1.72
TSSC4-209ENST00000485682 PPP1R15AO75807 674 aaPredicted RBP25.79■■□□□ 1.72
TSSC4-209ENST00000485682 CERKQ8TCT0 537 aa25.79■■□□□ 1.72
TSSC4-209ENST00000485682 PLEKHG1Q9ULL1 1385 aa25.78■■□□□ 1.72
TSSC4-209ENST00000485682 NUTM2DQ5VT03 806 aaPredicted RBP25.77■■□□□ 1.72
TSSC4-209ENST00000485682 BCANQ96GW7 911 aa25.74■■□□□ 1.71
TSSC4-209ENST00000485682 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
TSSC4-209ENST00000485682 SLC26A8Q96RN1 970 aa25.73■■□□□ 1.71
TSSC4-209ENST00000485682 RPGRIP1LQ68CZ1 1315 aa25.72■■□□□ 1.71
TSSC4-209ENST00000485682 NEXMIFQ5QGS0 1516 aa25.71■■□□□ 1.71
TSSC4-209ENST00000485682 SPATA31E1Q6ZUB1 1445 aa25.71■■□□□ 1.71
TSSC4-209ENST00000485682 SENP3Q9H4L4 574 aaPredicted RBP25.69■■□□□ 1.7
TSSC4-209ENST00000485682 TBX22Q9Y458 520 aa25.69■■□□□ 1.7
TSSC4-209ENST00000485682 CPS1P31327 1500 aa25.68■■□□□ 1.7
TSSC4-209ENST00000485682 ADAMTS13Q76LX8 1427 aa25.66■■□□□ 1.7
TSSC4-209ENST00000485682 VGFO15240 615 aaPredicted RBP25.66■■□□□ 1.7
TSSC4-209ENST00000485682 RGL3Q3MIN7 710 aa25.66■■□□□ 1.7
TSSC4-209ENST00000485682 IQSEC2Q5JU85 1478 aa25.65■■□□□ 1.7
TSSC4-209ENST00000485682 KCNA6P17658 529 aa25.64■■□□□ 1.7
TSSC4-209ENST00000485682 STRCP1A6NGW2 1772 aa25.64■■□□□ 1.69
TSSC4-209ENST00000485682 DIP2AQ14689 1571 aa25.61■■□□□ 1.69
TSSC4-209ENST00000485682 SETBP1Q9Y6X0 1596 aa25.61■■□□□ 1.69
TSSC4-209ENST00000485682 FBXO41Q8TF61 875 aa25.61■■□□□ 1.69
TSSC4-209ENST00000485682 PPLO60437 1756 aa25.61■■□□□ 1.69
TSSC4-209ENST00000485682 NRXN3Q9Y4C0 1643 aa25.59■■□□□ 1.69
TSSC4-209ENST00000485682 PIK3R4Q99570 1358 aa25.58■■□□□ 1.69
TSSC4-209ENST00000485682 LRRC7Q96NW7 1537 aa25.58■■□□□ 1.68
TSSC4-209ENST00000485682 CHD2O14647 1828 aaKnown RBP25.56■■□□□ 1.68
TSSC4-209ENST00000485682 NWD1Q149M9 1564 aa25.55■■□□□ 1.68
TSSC4-209ENST00000485682 IFT172Q9UG01 1749 aa25.54■■□□□ 1.68
TSSC4-209ENST00000485682 ILDR1Q86SU0 546 aaPredicted RBP25.54■■□□□ 1.68
TSSC4-209ENST00000485682 ADGRF5Q8IZF2 1346 aa25.54■■□□□ 1.68
TSSC4-209ENST00000485682 DHX57Q6P158 1386 aaKnown RBP25.52■■□□□ 1.68
TSSC4-209ENST00000485682 NKTRP30414 1462 aaKnown RBP25.52■■□□□ 1.68
TSSC4-209ENST00000485682 METP08581 1390 aa25.5■■□□□ 1.67
TSSC4-209ENST00000485682 PROSER2Q86WR7 435 aaPredicted RBP25.5■■□□□ 1.67
TSSC4-209ENST00000485682 PTPRUQ92729 1446 aa25.49■■□□□ 1.67
TSSC4-209ENST00000485682 AMOTL2Q9Y2J4 779 aa25.49■■□□□ 1.67
TSSC4-209ENST00000485682 TMEM94Q12767 1356 aa25.48■■□□□ 1.67
TSSC4-209ENST00000485682 ALKQ9UM73 1620 aa25.48■■□□□ 1.67
TSSC4-209ENST00000485682 PCGF6Q9BYE7 350 aa25.47■■□□□ 1.67
TSSC4-209ENST00000485682 MYOM2P54296 1465 aa25.47■■□□□ 1.67
TSSC4-209ENST00000485682 UBAP1LF5GYI3 381 aa25.46■■□□□ 1.67
TSSC4-209ENST00000485682 PIK3C2GO75747 1445 aa25.46■■□□□ 1.67
TSSC4-209ENST00000485682 STAC3Q96MF2 364 aa25.45■■□□□ 1.66
TSSC4-209ENST00000485682 SETD1AO15047 1707 aaKnown RBP25.45■■□□□ 1.66
TSSC4-209ENST00000485682 NRXN1Q9ULB1 1477 aa25.45■■□□□ 1.66
TSSC4-209ENST00000485682 XIRP1Q702N8 1843 aaKnown RBP25.44■■□□□ 1.66
TSSC4-209ENST00000485682 DCAF11Q8TEB1 546 aa25.44■■□□□ 1.66
TSSC4-209ENST00000485682 TOM1O60784 492 aa25.42■■□□□ 1.66
TSSC4-209ENST00000485682 RBM33Q96EV2 1170 aaKnown RBP25.42■■□□□ 1.66
TSSC4-209ENST00000485682 XRN1Q8IZH2 1706 aaKnown RBP25.41■■□□□ 1.66
TSSC4-209ENST00000485682 NCOA3Q9Y6Q9 1424 aa25.4■■□□□ 1.66
TSSC4-209ENST00000485682 SIN3AQ96ST3 1273 aa25.4■■□□□ 1.66
TSSC4-209ENST00000485682 C14orf93Q9H972 538 aaKnown RBP25.4■■□□□ 1.66
TSSC4-209ENST00000485682 KDM2AQ9Y2K7 1162 aa25.4■■□□□ 1.66
TSSC4-209ENST00000485682 CFAP70Q5T0N1 1121 aa25.35■■□□□ 1.65
TSSC4-209ENST00000485682 PRAG1Q86YV5 1406 aa25.35■■□□□ 1.65
TSSC4-209ENST00000485682 MSH6P52701 1360 aa25.33■■□□□ 1.65
TSSC4-209ENST00000485682 NEUROD1Q13562 356 aa25.33■■□□□ 1.65
TSSC4-209ENST00000485682 TMEM132EQ6IEE7 984 aa25.33■■□□□ 1.65
TSSC4-209ENST00000485682 PTCH1Q13635 1447 aa25.32■■□□□ 1.64
TSSC4-209ENST00000485682 C14orf37Q86TY3 774 aa25.32■■□□□ 1.64
TSSC4-209ENST00000485682 ASXL1Q8IXJ9 1541 aa25.32■■□□□ 1.64
TSSC4-209ENST00000485682 LRPPRCP42704 1394 aaKnown RBP25.31■■□□□ 1.64
TSSC4-209ENST00000485682 LAMC1P11047 1609 aa25.31■■□□□ 1.64
TSSC4-209ENST00000485682 C19orf44Q9H6X5 657 aa25.31■■□□□ 1.64
TSSC4-209ENST00000485682 ROBO2Q9HCK4 1378 aa25.31■■□□□ 1.64
TSSC4-209ENST00000485682 L3MBTL2Q969R5 705 aa25.3■■□□□ 1.64
TSSC4-209ENST00000485682 PIP4K2BP78356 416 aa25.29■■□□□ 1.64
TSSC4-209ENST00000485682 ABCC11Q96J66 1382 aa25.29■■□□□ 1.64
TSSC4-209ENST00000485682 STK26Q9P289 416 aa25.28■■□□□ 1.64
TSSC4-209ENST00000485682 TECPR2O15040 1411 aa25.28■■□□□ 1.64
TSSC4-209ENST00000485682 YTHDC2Q9H6S0 1430 aaKnown RBP25.28■■□□□ 1.64
TSSC4-209ENST00000485682 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.63
TSSC4-209ENST00000485682 CADPS2Q86UW7 1296 aa25.24■■□□□ 1.63
TSSC4-209ENST00000485682 SIRT1Q96EB6 747 aa25.24■■□□□ 1.63
TSSC4-209ENST00000485682 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.23■■□□□ 1.63
TSSC4-209ENST00000485682 ADGRB1O14514 1584 aa25.23■■□□□ 1.63
TSSC4-209ENST00000485682 ADGRL3Q9HAR2 1447 aa25.23■■□□□ 1.63
TSSC4-209ENST00000485682 ATF3P18847 181 aa25.23■■□□□ 1.63
TSSC4-209ENST00000485682 SLAIN2Q9P270 581 aa25.22■■□□□ 1.63
TSSC4-209ENST00000485682 KNDC1Q76NI1 1749 aa25.22■■□□□ 1.63
TSSC4-209ENST00000485682 DCCP43146 1447 aa25.21■■□□□ 1.63
TSSC4-209ENST00000485682 FAM135BQ49AJ0 1406 aa25.2■■□□□ 1.62
TSSC4-209ENST00000485682 WAPLQ7Z5K2 1190 aa25.19■■□□□ 1.62
TSSC4-209ENST00000485682 NALCNQ8IZF0 1738 aa25.17■■□□□ 1.62
TSSC4-209ENST00000485682 KIAA1210Q9ULL0 1709 aa25.17■■□□□ 1.62
TSSC4-209ENST00000485682 CLSPNQ9HAW4 1339 aa25.16■■□□□ 1.62
TSSC4-209ENST00000485682 TONSLQ96HA7 1378 aa25.16■■□□□ 1.62
TSSC4-209ENST00000485682 PLEKHH1Q9ULM0 1364 aa25.16■■□□□ 1.62
TSSC4-209ENST00000485682 DLC1Q96QB1 1528 aa25.15■■□□□ 1.62
TSSC4-209ENST00000485682 HSPA1LP34931 641 aa25.14■■□□□ 1.62
TSSC4-209ENST00000485682 NBPF1Q3BBV0 1214 aa25.13■■□□□ 1.61
TSSC4-209ENST00000485682 TRAK1Q9UPV9 953 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms