RNA–Protein interactions for RNA: ENST00000485439.5

RPL35A-208, Transcript of ribosomal protein L35a, humanhuman

TSL 2

Gene RPL35A, Length 677 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-208ENST00000485439 RIMS2Q9UQ26 1411 aa11.85□□□□□ -0.51
RPL35A-208ENST00000485439 DIP2AQ14689 1571 aa11.84□□□□□ -0.51
RPL35A-208ENST00000485439 KIF1BO60333 1816 aa11.84□□□□□ -0.51
RPL35A-208ENST00000485439 TOM1O60784 492 aa11.84□□□□□ -0.51
RPL35A-208ENST00000485439 TRPM2O94759 1503 aa11.83□□□□□ -0.52
RPL35A-208ENST00000485439 SCAF1Q9H7N4 1312 aaKnown RBP11.83□□□□□ -0.52
RPL35A-208ENST00000485439 CLTCL1P53675 1640 aa11.82□□□□□ -0.52
RPL35A-208ENST00000485439 PLEKHG1Q9ULL1 1385 aa11.82□□□□□ -0.52
RPL35A-208ENST00000485439 HFM1A2PYH4 1435 aa11.82□□□□□ -0.52
RPL35A-208ENST00000485439 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
RPL35A-208ENST00000485439 DISP3Q9P2K9 1392 aa11.8□□□□□ -0.52
RPL35A-208ENST00000485439 NRXN3Q9Y4C0 1643 aa11.79□□□□□ -0.52
RPL35A-208ENST00000485439 PPP1R15AO75807 674 aaPredicted RBP11.79□□□□□ -0.52
RPL35A-208ENST00000485439 MED1Q15648 1581 aaPredicted RBP11.79□□□□□ -0.52
RPL35A-208ENST00000485439 CHGAP10645 457 aaKnown RBP11.78□□□□□ -0.52
RPL35A-208ENST00000485439 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
RPL35A-208ENST00000485439 SLC26A8Q96RN1 970 aa11.78□□□□□ -0.52
RPL35A-208ENST00000485439 SETBP1Q9Y6X0 1596 aa11.78□□□□□ -0.52
RPL35A-208ENST00000485439 TMEM94Q12767 1356 aa11.78□□□□□ -0.52
RPL35A-208ENST00000485439 KCNA6P17658 529 aa11.77□□□□□ -0.53
RPL35A-208ENST00000485439 HSPA1LP34931 641 aa11.77□□□□□ -0.53
RPL35A-208ENST00000485439 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.77□□□□□ -0.53
RPL35A-208ENST00000485439 BCANQ96GW7 911 aa11.77□□□□□ -0.53
RPL35A-208ENST00000485439 ROBO1Q9Y6N7 1651 aa11.77□□□□□ -0.53
RPL35A-208ENST00000485439 XRN1Q8IZH2 1706 aaKnown RBP11.77□□□□□ -0.53
RPL35A-208ENST00000485439 ADAMTS13Q76LX8 1427 aa11.77□□□□□ -0.53
RPL35A-208ENST00000485439 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
RPL35A-208ENST00000485439 PPLO60437 1756 aa11.74□□□□□ -0.53
RPL35A-208ENST00000485439 SENP3Q9H4L4 574 aaPredicted RBP11.74□□□□□ -0.53
RPL35A-208ENST00000485439 PIK3R4Q99570 1358 aa11.74□□□□□ -0.53
RPL35A-208ENST00000485439 SETD1AO15047 1707 aaKnown RBP11.73□□□□□ -0.53
RPL35A-208ENST00000485439 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.73□□□□□ -0.53
RPL35A-208ENST00000485439 MSH6P52701 1360 aa11.72□□□□□ -0.53
RPL35A-208ENST00000485439 NUTM2DQ5VT03 806 aaPredicted RBP11.72□□□□□ -0.53
RPL35A-208ENST00000485439 PROSER2Q86WR7 435 aaPredicted RBP11.72□□□□□ -0.53
RPL35A-208ENST00000485439 TBX22Q9Y458 520 aa11.72□□□□□ -0.53
RPL35A-208ENST00000485439 TRIM52Q96A61 297 aa11.71□□□□□ -0.53
RPL35A-208ENST00000485439 PHLPP1O60346 1717 aa11.71□□□□□ -0.54
RPL35A-208ENST00000485439 IFT172Q9UG01 1749 aa11.71□□□□□ -0.54
RPL35A-208ENST00000485439 FAM135BQ49AJ0 1406 aa11.7□□□□□ -0.54
RPL35A-208ENST00000485439 NCOA3Q9Y6Q9 1424 aa11.7□□□□□ -0.54
RPL35A-208ENST00000485439 ZNF326Q5BKZ1 582 aaKnown RBP11.7□□□□□ -0.54
RPL35A-208ENST00000485439 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
RPL35A-208ENST00000485439 PHF23Q9BUL5 403 aaPredicted RBP11.69□□□□□ -0.54
RPL35A-208ENST00000485439 SLC4A1APQ9BWU0 796 aaKnown RBP11.69□□□□□ -0.54
RPL35A-208ENST00000485439 NALCNQ8IZF0 1738 aa11.69□□□□□ -0.54
RPL35A-208ENST00000485439 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
RPL35A-208ENST00000485439 ILDR2Q71H61 639 aa11.68□□□□□ -0.54
RPL35A-208ENST00000485439 COL16A1Q07092 1604 aaPredicted RBP11.67□□□□□ -0.54
RPL35A-208ENST00000485439 DCCP43146 1447 aa11.66□□□□□ -0.54
RPL35A-208ENST00000485439 AHDC1Q5TGY3 1603 aaPredicted RBP11.65□□□□□ -0.54
RPL35A-208ENST00000485439 C14orf37Q86TY3 774 aa11.65□□□□□ -0.54
RPL35A-208ENST00000485439 CCDC144AA2RUR9 1427 aa11.65□□□□□ -0.54
RPL35A-208ENST00000485439 AMOTL2Q9Y2J4 779 aa11.64□□□□□ -0.55
RPL35A-208ENST00000485439 METP08581 1390 aa11.64□□□□□ -0.55
RPL35A-208ENST00000485439 SETD5Q9C0A6 1442 aa11.63□□□□□ -0.55
RPL35A-208ENST00000485439 NHSL1Q5SYE7 1610 aa11.63□□□□□ -0.55
RPL35A-208ENST00000485439 SHPRHQ149N8 1683 aa11.62□□□□□ -0.55
RPL35A-208ENST00000485439 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
RPL35A-208ENST00000485439 SPATA31E1Q6ZUB1 1445 aa11.62□□□□□ -0.55
RPL35A-208ENST00000485439 PRAG1Q86YV5 1406 aa11.62□□□□□ -0.55
RPL35A-208ENST00000485439 ADGRL3Q9HAR2 1447 aa11.62□□□□□ -0.55
RPL35A-208ENST00000485439 SLAIN2Q9P270 581 aa11.62□□□□□ -0.55
RPL35A-208ENST00000485439 KNDC1Q76NI1 1749 aa11.62□□□□□ -0.55
RPL35A-208ENST00000485439 RPGRIP1LQ68CZ1 1315 aa11.61□□□□□ -0.55
RPL35A-208ENST00000485439 ACIN1Q9UKV3 1341 aaKnown RBP11.61□□□□□ -0.55
RPL35A-208ENST00000485439 FOXD1Q16676 465 aa11.61□□□□□ -0.55
RPL35A-208ENST00000485439 CADPS2Q86UW7 1296 aa11.61□□□□□ -0.55
RPL35A-208ENST00000485439 C19orf44Q9H6X5 657 aa11.61□□□□□ -0.55
RPL35A-208ENST00000485439 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
RPL35A-208ENST00000485439 SOCS7O14512 581 aa11.6□□□□□ -0.55
RPL35A-208ENST00000485439 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
RPL35A-208ENST00000485439 ATF3P18847 181 aa11.6□□□□□ -0.55
RPL35A-208ENST00000485439 MPHOSPH9Q99550 1183 aa11.6□□□□□ -0.55
RPL35A-208ENST00000485439 LAMC1P11047 1609 aa11.6□□□□□ -0.55
RPL35A-208ENST00000485439 RAB3GAP2Q9H2M9 1393 aa11.59□□□□□ -0.55
RPL35A-208ENST00000485439 MST1RQ04912 1400 aa11.59□□□□□ -0.55
RPL35A-208ENST00000485439 ANKRD30BQ9BXX2 1392 aa11.57□□□□□ -0.56
RPL35A-208ENST00000485439 JCADQ9P266 1359 aa11.57□□□□□ -0.56
RPL35A-208ENST00000485439 ROBO2Q9HCK4 1378 aa11.56□□□□□ -0.56
RPL35A-208ENST00000485439 PIK3C2GO75747 1445 aa11.56□□□□□ -0.56
RPL35A-208ENST00000485439 CDC42BPGQ6DT37 1551 aa11.56□□□□□ -0.56
RPL35A-208ENST00000485439 MYOM2P54296 1465 aa11.56□□□□□ -0.56
RPL35A-208ENST00000485439 TECPR2O15040 1411 aa11.54□□□□□ -0.56
RPL35A-208ENST00000485439 BRINP3Q76B58 766 aa11.54□□□□□ -0.56
RPL35A-208ENST00000485439 ADGRF5Q8IZF2 1346 aa11.54□□□□□ -0.56
RPL35A-208ENST00000485439 NRXN1Q9ULB1 1477 aa11.53□□□□□ -0.56
RPL35A-208ENST00000485439 RGL3Q3MIN7 710 aa11.53□□□□□ -0.56
RPL35A-208ENST00000485439 LRP6O75581 1613 aa11.53□□□□□ -0.56
RPL35A-208ENST00000485439 FMN2Q9NZ56 1722 aa11.52□□□□□ -0.56
RPL35A-208ENST00000485439 C1orf167Q5SNV9 1468 aa11.52□□□□□ -0.56
RPL35A-208ENST00000485439 SPATA31A6Q5VVP1 1343 aa11.51□□□□□ -0.57
RPL35A-208ENST00000485439 LRPPRCP42704 1394 aaKnown RBP11.51□□□□□ -0.57
RPL35A-208ENST00000485439 RGS17Q9UGC6 210 aaPredicted RBP11.5□□□□□ -0.57
RPL35A-208ENST00000485439 YTHDC2Q9H6S0 1430 aaKnown RBP11.49□□□□□ -0.57
RPL35A-208ENST00000485439 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
RPL35A-208ENST00000485439 RGPD8O14715 1765 aaPredicted RBP11.49□□□□□ -0.57
RPL35A-208ENST00000485439 ABCC11Q96J66 1382 aa11.48□□□□□ -0.57
RPL35A-208ENST00000485439 COL22A1Q8NFW1 1626 aaPredicted RBP11.47□□□□□ -0.57
RPL35A-208ENST00000485439 DLC1Q96QB1 1528 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms